Ll_transcript_295901

• Id Trinity: TRINITY_DN51718_c0_g1_i17
• Name Transcript: Ll_transcript_295901
• Sequence: GAAAGTTTGAGGTCCAAGACTTTGACTTTTCTCCTATTCCTTTCTTCATCTTCACCATCATCATTCATTATCACCACCTTCCTTTCATTTTCTGCTACCG TTCTTGGTTTTGCTCAAAACCCTCTTCACTCTTTTCTCTTTTCTCTTTTCATTCATTAAGCTCAATTCTCCTTCCATTTTCCGTTTTTTCTTCAATCCAT TTCTCTCAGGTAATAATAACCTAATTACCCTTCTTATCGTCTTCTTTCATCGCCTTCCCTTTTTTTCTAATTTATTTTCTTTCTCATAATTAACCCCGTT ATCGTTCAAGGGTTTGAAAAAAAAATCATTTTTTGGGGAAAAATCGGTTTTTTATTTTTGTGATAAAACAAAATAAGAAAAAATTAGGAAAGATCAAACA CGAGAGAGGCAAATTGAAGATTAGGGTTTCTTCGTTTTGTGAAAAAGATGGAAGCTTTGGATGCTAATTCAGACCAATATGCTACCATGTCTTCTAATTC ATCATCATCATCTTCTGGAGGTGTTAATAGTAGTGATAACAATGTTAATAGTAATAGTAGGGCTGGCACTGTAACCTGGTATGGCATGAATTTACCCTCT GTGAGAACTTTGCGTTCTCCAATTTCCTTTTTGTTGGAGAACTCTGGCATCCTAACCTCAGCCCCTGATTCTGAGGCTGTGGTTGTTAACAATGGGGTTA CCGGTTCGGAGTTACGGTCTCAGCTTCAAACTCAATCACTCCATGGTGGTGGTGCTTCAGCTGCTGCTGCTGGAACACCCTGCACCAATAGTGCTGGTGA GGTTGCAATAAGGATCATTGGGTCTGGAGAGAATGATCACAGTGTCGTAGGGTCTGGTTCTCTTTCATCATCTTCATGGAATCGGCATGGAGAAGTTGGT TATGGTGGATACGATGATGTTGTGAGGGATAGAGATGGAATGCCTGGTTTGGTTGATGGTGGTGGTGAGGATCATGGTGGAATTACGGCTAGTGAGAGGG TTCCTCATGTGTCTTCATCTTCGTCATTGGCTGGTAGTGGACAAGTTGGTGGAGAGGCTGCTGGGAATGGCTTAGAAAGTAACGGTAGGGAGTTGTCGTC CTACCAGAGGTATGACATTCAGCAGATTGCGAAGTGGATTGAGCAAATTCTGCCTTTCTCACTCTTGTTGTTCGTTGTTTTCATCCGTCAGCATTTGCAA GGTTTCTTTGTCACAATTTGGGTATCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAGAGGCAGACAGCTTTAAAGGGAGATAGGAGAGTATCTATCC TTGTTGGCATCTCAATTGCCTTCATGCTTCATGTGATGTGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCGCTGATCATGATTCCCCCAAA AGCTACACCTTTTTGGCATTCAATATTCATCATTTTGGTTAATGATACATTGATGCGGCAAGCAGCAATGGCTTTCAAGTGTTTTCTGCTTATATATTAC AAAAATGGCAGAGGTCAAAACTTCCGTAGGCAGGCTCAAATGTTGACTCTGGTTGAGTACACACTGCTGTTGTATCGTGCCTTGTTGCCAACTCCAGTTT GGTACCGTTTTTTCCTGAACAAGGATTATGGCAGTCTCTTTTCATCACTGATCACTGGGTTGTATTTAACTTTCAAGCTAACATCTGTTGTTGAGAAGGT TAAATGTTTTTTTTCTGCCGTGAAAGCATTATCAAGAAAGGATGTTAACTATGGGGTTTGTGCCACAATGGAACAGGTTAATGCTGCTGGTGATCTATGT GCTATATGCCAGGAGAAGATGCATGCCCCCATCTTGTTGCAATGTAAACACATTTTCTGTGAAGAGTGTGTATCAGAATGGTTTGAGAGAGAAAGAACTT GCCCACTTTGTAGAGCATTGGTAAGACCTGCTGATCTGAAAACCTTTGGAGATGGATCTACAAGTCTACTGTTTCAGTTGTTTTAAACTCATATTCTGTA TTGATATCACATGTACAAACCCGAGGGGGTCCACTAAGTCACTAACTCATATTTATTCCTAATGTGTTAGGCAAATATGGTGAACACAAATTGTTCATAT TATTACATCCTTTTGCTTTTAAGTATATGTAACAGGCTTTATGCTATAATATATGAGCCCTTCTTGAATTTGCTACTTATTATT
• Tissue: pods
• Gene name: LI_gene_187120;
• Additional information: details;

Expression of Ll_transcript_295901

FPKM

• PAB: 4.8
• PNAB: 3.7
• PS1: 4.8
• PS2: 2.6
• PS3: 4
• PW1: 3.3
• PW2: 2.5
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_295901

• Blastp: RING finger and transmembrane domain-containing protein 2 from Homo with 28.44% of identity
• Blastx: RING finger and transmembrane domain-containing protein 2 from Homo with 29.25% of identity
• Eggnog: Ring finger protein, transmembrane(ENOG4111HH8)
• Kegg: Link to kegg annotations (84900)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456530.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;