| Id Trinity | TRINITY_DN51719_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_296547 |
| Sequence | CTTCTTCTTTCTCCCAAACTCACCATCATAACATTATTTTCACTACACACATAGTGAAGAAGAAAGAAGAAGAAGAAAAAAACACTTGCTTTATATAGTA GAGTGTGTTTTTGTGAAGAAGAAAAAGCATAATTGAGAGAGAAAATGAAGTATGTGTTGGTAACTGGTGGAGTAGTTAGTGGACTTGGTAAAGGAGTTAC AGCTAGTAGTATTGGTTTGCTTCTCAAAGCATGTGGACTTAGAGTTACTGCTATTAAAATTGATCCTTACTTAAACACAGATGCTGGAACAATGTCCCCT TTTGAGCATGGAGAAGTGTTTGTGTTGGATGATGGTGGTGAGGTGGACCTGGATCTTGGAAACTATGAGCGCTTTATGGATATCAAGTTGACCCGTGATA ATAACATAACTACTGGCAAGATTTACCAGGCAAGTTCTTTACCCTTTATTGTTTACCATACCATGCTGCTTTTTCCATAAAGATACTTTTGGATAACCTT TAGTTGATGTGTTAAAATCATAGTCACATCTTTCCGTTTTACGTATCGCATACAAGATTCGGCATACTGCATATCACATACGGGGTCTTACAAAAAAATC TTGTGTTAATCGAGTATCGCATACTAGAACCGACTACCATGAATCATGTAACTATGGTTAAAACAACAATAACCAAGCCTTAATCTACTGGAAGGTATGG AACCAAAACATAAGAACAACAATCTTGTTCAGTTCATGTGTTTGTGTGGCAAATGTTATCAAAATTTGCAGAAAAACTGTTCCTTGATGTCATGCTTCGC CTTTCATATTTCGTAATTTCGTGGCAGTTTGTAATTGATAAGGAGAGAAGAGGAGACTACTTAGGAAAAACTGTTCAGGTAAGTCCTGCTTAATCAATCT GATAATGTTTTTGTTATGAACTTCTGATGATAAAGAAAAGGAAAAAAAAACATTATGTTTAGTCTTTAATGTTGTTATGTTTTTTACACTTTTAGGTTGT CCCTCACATCACTGATGCTATTCAAGAGTGGATAGAGAGGGTGGCCCACATACCAGTAGATGGAAAAACAGGTTCAGCTGATGTGTGTGTAATTGAGTTA GGTGGAACTATAGGAGATATTGAGTCTATGCCATTTATTCAGGCATTAGGACAATTCTCATACAGAGTAGGTGCTGGCAACTTTTGCTTAGTTCATGTTA GCCTTGTTCCGGTTTTAAACGTTGTTGGTGAACAGAAAACAAAACCAACTCAACATAGTGTTCGTGGGTTACGCGGCCAAGGTCTGACTCCTCATATCTT AGCGTGCCGAAGCACAACGGTGCTGGATGAGAATGCAAAGAGAAAACTCTCGCAATTTTGCCTGATTCAGGAAGAAAACATTGTTACTCTTTATGATGTT CCCAACATTTGGCACATTCCCTTGCTTTTAAGAGACCAGAAGGCTCATGAAGCAATATTTAAAGTTCTGAACCTTTATGGTGTAGTTGAGCCTAATTTAG AGGAATGGACTCGTAGGGCTGAAGCTTGCGATTTGCTTCACGAACAGGTACATATCGCCTTGGTGGGGAAATATACAGGCCTTTCCGATGCGTATCTCTC TATTCTAAAGGCCTTAGTGCATGCTTCTGTTGATTGCCACAAGAAACTTTTTGTGGACTGGATCTCTGCTACCAACCTTGAAGATGCAACTGCAAAAGAG AATCCTGATGCTTATAAGACAGCATGGAAGTTATTGAAGGGTGCAGATGGTGTTCTTGTTCCCGGAGGGTTTGGGGATAGAGGAGTGCAGGGAAAAATTC TCGCCGCTAAGTATGCCCGTGAAAACAGAATTCCCTACCTTGGCATATGTCTTGGAATGCAAATTGCCGTAATAGAGTTCGCACGATCTGTTCTTGGTGT ACATGATGCTAATAGCACTGAATTTGATCCGAATGCCAAAAACCCGGTTATCATATTTATGCCTGAGGGATCGAAAACACATATGGGAGGCACCATGCGT CTTGGATCTCGGAGGACCTTTTTCCAGACCAAGGAATGCAAATCCGCAAAATTGTATGGCTGTAAAGGCTTCATTGAGGAGAGACATCGACATAGATATG AGGTGAACCCTGATTTAGTTGCTTGCCTCGAAAATGCCGGTCTTTCTTTTACAGGGAAGGATGAAACGGGTAAACGCATGGAGATTGTTGAGGTACCTAA TCATCCTTATTTTATTGGTGTTCAATTCCATCCTGAATTTAAATCAAGACCAGGAAAACCCTCTCCATTGTTCTTAGGGTTCATTGCAGCAGCATGTGGA AAACTGGATAATATGTTACAACACCCTTCAAGTGTTGAAAGCAATGGTCTCTCAAAAGCAGTAGGCACCGGTGTCGTCTCGGCCGTAAAAGCACACAATA AGAAAACTGCAATGAAGCCAGCTTATAGGCCAGAATATGTTTATGGCAGCTGCAATGGATATCATTACTAAATGTTGCATGTTTTTGTTTATCTTAGAAT TTTAAGGTTAATTAGTTAAGTATATGTTGTTGTTTGCTTAAGTTGTCTATGACAACATGTTTGTACAGTGAATTGAAGCTTGGTAGGAATAGAGTTTTCT GAGAATAGAGAAGAGCTTGGTCCTGGTATTTTTAATGGAACATGCTCATTTAAGTTTATAATGGTGTTAGAGTGGAAAACTCTTGAGCTTTCTTTGTCTA ATGTTTCAGTGAAATGGAAAACTCTTTGTTTTGGAAAGATATAATGCTGTCTATAGAGAAGTTCTGATATATTTCTACTTTTTGGAGGACGTAGAGTCGA CTAATCATCTTCTTCTAGCTTGTCCGTTTACATATTCAGTATGGAAAAGTTTCTATTCTTGGTTACATATCCCAACTCTTCTGCCTAATTCTCTTTCAGA TTTATTGGTTATGCATGATTCTTTTTATAGAGCTTCAAAAGGTAGAAGTTATTGGAGAATGCTTTGGTTCACAGTGGTGTGGTCGATCTGACTCATGAGA AATGATATAATTTTCTCGGCTAAAGAGGTTAGCTTTACTGAGGTGATGGACTTGATTCAGATTCGGTCTTGGACTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_187122; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_296547
| Blastp | CTP synthase 2 from Xenopus with 51.62% of identity |
|---|---|
| Blastx | CTP synthase 1 from Mus with 49.9% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (444477) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446965.1) |
| Pfam | CTP synthase N-terminus (PF06418.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |