Ll_transcript_296571

• Id Trinity: TRINITY_DN51719_c0_g1_i24
• Name Transcript: Ll_transcript_296571
• Sequence: CATCACTCATCACTCATCACTCATATATAGTTAGAGAAGAAAATGAAGTATGTGTTGGTGAGTGGTGGAGTAGTTAGTGGACTTGGTAAAGGAGTTACAG CTAGTAGTATTGGTTTGCTTCTCAAAGCTAGTGGTCTTAGAGTCACTGCCATCAAAATTGATCCTTACTTCAACACTGATGCTGGAACAATGTCCCCTTT TGAGCATGGAGAAGTTTTTGTGTTGGATGATGGTGCTGAGGTGGACTTGGATCTTGGAAACTATGAGCGCTTTATGGATATCAAGTTGACCCGTGATAAT AATATAACTACTGGCAAGATTTATCAGTTTGTAATTGATAAGGAGAGAAGAGGAGACTATTTAGGAAAAACTGTTCAGGTTGTTCCTCACATTACTGATG CTATTCAAGAATGGATAGAGAGAGTGGCTCACATACCAGTTGATGGAAAACCAGGTTCAGCTGATGTATGTGTAATAGAATTGGGTGGAACTATAGGAGA TATCGAATCTATGCCGTTTATTCAGGCATTAGGACAATTCTCTTACAGAGTAGGTTCTGGCAACTTTTGCTTAGTTCATGTTAGTCTTGTTCCGGTTGTA AATGTTGTTGGTGAACAGAAAACAAAACCAACTCAACATAGTGTTCGCCGACTGCGAGGCCAGGGTCTTACTCCTCATATCTTAGCATGCCGCAGCACAA CGGCACTGGATGAGAATGCAAAGCGAAAACTCTCTCAATTTTGCCTGATTCAGGCAGAAAACATTGTTACTCTTTATGATGTTCCCAACATCTGGCACAT TCCGTTGCTTTTACGAGATCAGAAGGCTCATGAAGCAATATTTAAAGTGCTGAACCTTACTGGTGTAGCTCGAGAGCCGAGTTTAGAGGAATGGACTTGT AGAGCTGAAGCTTGTGATTTGCTTCATGAACCAGTTCGTATTGCCTTGGTGGGAAAATACACAGGTCTTTCGGATGCGTACCTCTCTATTCTAAAGGCCT TAGTGCATGCTTCGGTTGATTGCCGAAAGAAACTTTTTGTGGACTGGATTTCAGCGACCAATCTCGAAGATTCCACCGCAAAAGAGAATCCTGATGCTTA TAAGGCAGCATGGAAGTTATTGAAGGGTGCTGATGGTGTTCTTATTCCTGGAGGGTTTGGGGATAGAGGAGTGCAGGGAAAAATTATTGCTGCTAAGTAT GCTCGCGAAAACAGAATTCCGTTCCTTGGCATTTGTCTTGGAATGCAAATCGCTGTCGTAGAATTTACACGATCTGTTCTTGGTGTACATGATGCTAATA GCACCGAATTTGATCCGAACGTGAAAAGCCCCGTTGTTATATTCATGCCTGAGGGATCAAAAACACATATGGGAGGCACCATGCGCCTCGGTTCGAGGAG GACATTTTTCCAGACCAAGGATTGCAAATCTGCAAAATTGTATGGCTGCAAAAGCTTCATCGATGAGAGACATCGGCATAGATATGAGGTGAACCCGGAT TTTGTGGTTCGGCTAGAAAATGCTGGACTTTCTTTTACAGGGAAGGATGAAACTGGTAAACGCATGGAGATTGTTGAGCTACCTAATCATCCTTATTTTA TTGGTGTTCAATTCCATCCTGAATTTAAATCAAAACCAGGAAAACCTTCTCCATTGTTCTTAGGGTTAATTGCTGCAGCATGTGGACAACTGGATACTGT CTTACAACACTCTTCCAATGTTGACAGTTGTGGTCTCTCAAAAGCAGTAGGCACCGATGTCTTGGCGATCAAAGCATACAATAAGAAAGCTGTAATCAAG GCAGCTTATATGCCAGAATATGTTTATGGCAGCCTCAATGGATACCATTTCTAAATGTTGCTGGTTTTTCTTCATCTTAGAAATTTCAACTTAAATGGTT ATATATGTGTTGTGGTTTGATTTCAGTTGTCTATGACAACATTTGTGTACAGTGAATTGAACCTTGGTAGGATATAGTTTTCTGAGAATATAGAAAAGTG CTTGGTCCCTCTTTTTTAATGAGGGCAAGCTCATTTAAGTTTGTAATGGTATAAGAGTGGATAACTGTTAAGCTTTCTTTGTTTTATGTTTCAGTGAAAT AGAAACTCTTGGTTTTGGAAAGATGTCTTTGGAGAAATTCTTATAGATTCCTACTATTTCCTTTTTAAAAAAAAC
• Tissue: pods
• Gene name: LI_gene_187122;
• Additional information: details;

Expression of Ll_transcript_296571

FPKM

• PAB: 0.3
• PNAB: 5.7
• PS1: 1.8
• PS2: 1
• PS3: 1.1
• PW1: 21.1
• PW2: 125.6
• PW3: 127.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296571

• Blastp: CTP synthase from Dictyostelium with 58.27% of identity
• Blastx: CTP synthase from Dictyostelium with 58.27% of identity
• Eggnog: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (By similarity)(COG0504)
• Kegg: Link to kegg annotations (DDB_G0280567)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422180.1)
• Pfam: CTP synthase N-terminus (PF06418.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;