Id Trinity | TRINITY_DN51719_c0_g1_i3 |
---|---|
Name Transcript | Ll_transcript_296549 |
Sequence | CTTCTTCTTTCTCCCAAACTCACCATCATAACATTATTTTCACTACACACATAGTGAAGAAGAAAGAAGAAGAAGAAAAAAACACTTGCTTTATATAGTA GAGTGTGTTTTTGTGAAGAAGAAAAAGCATAATTGAGAGAGAAAATGAAGTATGTGTTGGTAACTGGTGGAGTAGTTAGTGGACTTGGTAAAGGAGTTAC AGCTAGTAGTATTGGTTTGCTTCTCAAAGCATGTGGACTTAGAGTTACTGCTATTAAAATTGATCCTTACTTAAACACAGATGCTGGAACAATGTCCCCT TTTGAGCATGGAGAAGTGTTTGTGTTGGATGATGGTGGTGAGGTGGACCTGGATCTTGGAAACTATGAGCGCTTTATGGATATCAAGTTGACCCGTGATA ATAACATAACTACTGGCAAGATTTACCAGGCAAGTTCTTTACCCTTTATTGTTTACCATACCATGCTGCTTTTTCCATAAAGATACTTTTGGATAACCTT TAGTTGATGTGTTAAAATCATAGTCACATCTTTCCGTTTTACGTATCGCATACAAGATTCGGCATACTGCATATCACATACGGGGTCTTACAAAAAAATC TTGTGTTAATCGAGTATCGCATACTAGAACCGACTACCATGAATCATGTAACTATGGTTAAAACAACAATAACCAAGCCTTAATCTACTGGAAGGTATGG AACCAAAACATAAGAACAACAATCTTGTTCAGTTCATGTGTTTGTGTGGCAAATGTTATCAAAATTTGCAGAAAAACTGTTCCTTGATGTCATGCTTCGC CTTTCATATTTCGTAATTTCGTGGCAGTTTGTAATTGATAAGGAGAGAAGAGGAGACTACTTAGGAAAAACTGTTCAGGTAAGTCCTGCTTAATCAATCT GATAATGTTTTTGTTATGAACTTCTGATGATAAAGAAAAGGAAAAAAAAACATTATGTTTAGTCTTTAATGTTGTTATGTTTTTTACACTTTTAGGTTGT CCCTCACATCACTGATGCTATTCAAGAGTGGATAGAGAGGGTGGCCCACATACCAGTAGATGGAAAAACAGGTTCAGCTGATGTGTGTGTAATTGAGTTA GGTGGAACTATAGGAGATATTGAGTCTATGCCATTTATTCAGGCATTAGGACAATTCTCATACAGAGTAGGTGCTGGCAACTTTTGCTTAGTTCATGTTA GCCTTGTTCCGGTTTTAAACGTTGTTGGTGAACAGAAAACAAAACCAACTCAACATAGTGTTCGTGGGTTACGCGGCCAAGGTCTGACTCCTCATATCTT AGCGTGCCGAAGCACAACGGTGCTGGATGAGAATGCAAAGAGAAAACTCTCGCAATTTTGCCTGATTCAGGAAGAAAACATTGTTACTCTTTATGATGTT CCCAACATTTGGCACATTCCCTTGCTTTTAAGAGACCAGAAGGCTCATGAAGCAATATTTAAAGTTCTGAACCTTTATGGTGTAGTTGAGCCTAATTTAG AGGAATGGACTCGTAGGGCTGAAGCTTGCGATTTGCTTCACGAACAGGTACATATCGCCTTGGTGGGGAAATATACAGGCCTTTCCGATGCGTATCTCTC TATTCTAAAGGCCTTAGTGCATGCTTCTGTTGATTGCCACAAGAAACTTTTTGTGGACTGGATCTCTGCTACCAACCTTGAAGATGCAACTGCAAAAGAG GTTACATCAACTTTGATTTATCGTAATTTCTTTTGTTTTCCGTATTCCTCAACTTCGTCTTTATGATCTTTGTTTAATGTTGCAGAATCCTGATGCTTAT AAGACAGCATGGAAGTTATTGAAGGTTTCATTTACAATCTCGAGATGAACCATTTGTTACTTTAGCTATAAATTTCCCTCTCTTTAGTTCCGAGAACTCT ATGATTATTATCTAAGTGGTGTTTGCCTTCAGGGTGCAGATGGTGTTCTTGTTCCCGGAGGGTTTGGGGATAGAGGAGTGCAGGGAAAAATTCTCGCCGC TAAGTATGCCCGTGAAAACAGAATTCCCTACCTTGGCATATGTCTTGGAATGCAAATTGCCGTAATAGAGTTCGCACGATCTGTTCTTGGTGTACATGAT GCTAATAGCACTGAATTTGATCCGAATGCCAAAAACCCGGTTATCATATTTATGCCTGAGGGATCGAAAACACATATGGGAGGCACCATGCGTCTTGGAT CTCGGAGGACCTTTTTCCAGACCAAGGAATGCAAATCCGCAAAATTGTATGGCTGTAAAGGCTTCATTGAGGAGAGACATCGACATAGATATGAGGTGAA CCCTGATTTAGTTGCTTGCCTCGAAAATGCCGGTCTTTCTTTTACAGGGAAGGATGAAACGGGTAAACGCATGGAGATTGTTGAGGTACCTAATCATCCT TATTTTATTGGTGTTCAATTCCATCCTGAATTTAAATCAAGACCAGGAAAACCCTCTCCATTGTTCTTAGGGTTCATTGCAGCAGCATGTGGAAAACTGG ATAATATGTTACAACACCCTTCAAGTGTTGAAAGCAATGGTCTCTCAAAAGCAGTAGGCACCGGTGTCGTCTCGGCCGTAAAAGCACACAATAAGAAAAC TGCAATGAAGCCAGCTTATAGGCCAGAATATGTTTATGGCAGCTGCAATGGATATCATTACTAAATGTTGCATGTTTTTGTTTATCTTAGAATTTTAAGG TTAATTAGTTAAGTATATGTTGTTGTTTGCTTAAGTTGTCTATGACAACATGTTTGTACAGTGAATTGAAGCTTGGTAGGAATAGAGTTTTCTGAGAATA GAGAAGAGCTTGGTCCTGGTATTTTTAATGGAACATGCTCATTTAAGTTTATAATGGTGTTAGAGTGGAAAACTCTTGAGCTTTCTTTGTCTAATGTTTC AGTGAAATGGAAAACTCTTTGTTTTGGAAAGATATAATGCTGTCTATAGAGAAGTTCTGATATATTTCTACTTTTTGGAGGACGTAGAGTCGACTAATCA TCTTCTTCTAGCTTGTCCGTTTACATATTCAGTATGGAAAAGTTTCTATTCTTGGTTACATATCCCAACTCTTCTGCCTAATTCTCTTTCAGATTTATTG GTTATGCATGATTCTTTTTATAGAGCTTCAAAAGGTAGAAGTTATTGGAGAATGCTTTGGTTCACAGTGGTGTGGTCGATCTGACTCATGAGAAATGATA TAATTTTCTCGGCTAAAGAGGTTAGCTTTACTGAGGTGATGGACTTGATTCAGATTCGGTCTTGGACTT BLAST |
Tissue | pods |
Gene name | LI_gene_187122; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_296549
Blastp | CTP synthase 2 from Xenopus with 62.82% of identity |
---|---|
Blastx | CTP synthase 2 from Xenopus with 59.81% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (444477) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446965.1) |
Pfam | Glutamine amidotransferase class-I (PF00117.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |