Ll_transcript_296554

• Id Trinity: TRINITY_DN51719_c0_g1_i7
• Name Transcript: Ll_transcript_296554
• Sequence: CTTCTTCTTTCTCCCAAACTCACCATCATAACATTATTTTCACTACACACATAGTGAAGAAGAAAGAAGAAGAAGAAAAAAACACTTGCTTTATATAGTA GAGTGTGTTTTTGTGAAGAAGAAAAAGCATAATTGAGAGAGAAAATGAAGTATGTGTTGGTAACTGGTGGAGTAGTTAGTGGACTTGGTAAAGGAGTTAC AGCTAGTAGTATTGGTTTGCTTCTCAAAGCATGTGGACTTAGAGTTACTGCTATTAAAATTGATCCTTACTTAAACACAGATGCTGGAACAATGTCCCCT TTTGAGCATGGAGAAGTGTTTGTGTTGGATGATGGTGGTGAGGTGGACCTGGATCTTGGAAACTATGAGCGCTTTATGGATATCAAGTTGACCCGTGATA ATAACATAACTACTGGCAAGATTTACCAGGCAAGTTCTTTACCCTTTATTGTTTACCATACCATGCTGCTTTTTCCATAAAGATACTTTTGGATAACCTT TAGTTGATGTGTTAAAATCATAGTCACATCTTTCCGTTTTACGTATCGCATACAAGATTCGGCATACTGCATATCACATACGGGGTCTTACAAAAAAATC TTGTGTTAATCGAGTATCGCATACTAGAACCGACTACCATGAATCATGTAACTATGGTTAAAACAACAATAACCAAGCCTTAATCTACTGGAAGGTATGG AACCAAAACATAAGAACAACAATCTTGTTCAGTTCATGTGTTTGTGTGGCAAATGTTATCAAAATTTGCAGAAAAACTGTTCCTTGATGTCATGCTTCGC CTTTCATATTTCGTAATTTCGTGGCAGTTTGTAATTGATAAGGAGAGAAGAGGAGACTACTTAGGAAAAACTGTTCAGGTAAGTCCTGCTTAATCAATCT GATAATGTTTTTGTTATGAACTTCTGATGATAAAGAAAAGGAAAAAAAAACATTATGTTTAGTCTTTAATGTTGTTATGTTTTTTACACTTTTAGGTTGT CCCTCACATCACTGATGCTATTCAAGAGTGGATAGAGAGGGTGGCCCACATACCAGTAGATGGAAAAACAGGTTCAGCTGATGTGTGTGTAATTGAGTTA GGTGGAACTATAGGAGATATTGAGTCTATGCCATTTATTCAGGCATTAGGACAATTCTCATACAGAGTAGGTGCTGGCAACTTTTGCTTAGTTCATGTTA GCCTTGTTCCGGTTTTAAACGTTGTTGGTGAACAGAAAACAAAACCAACTCAACATAGTGTTCGTGGGTTACGCGGCCAAGGTCTGACTCCTCATATCTT AGCGTGCCGAAGCACAACGGTGCTGGATGAGAATGCAAAGAGAAAACTCTCGCAATTTTGCCTGATTCAGGAAGAAAACATTGTTACTCTTTATGATGTT CCCAACATTTGGCACATTCCCTTGCTTTTAAGAGACCAGAAGGCTCATGAAGCAATATTTAAAGTTCTGAACCTTTATGGTGTAGTTGAGCCTAATTTAG AGGAATGGACTCGTAGGGCTGAAGCTTGCGATTTGCTTCACGAACAGGTACATATCGCCTTGGTGGGGAAATATACAGGCCTTTCCGATGCGTATCTCTC TATTCTAAAGGCCTTAGTGCATGCTTCTGTTGATTGCCACAAGAAACTTTTTGTGGACTGGATCTCTGCTACCAACCTTGAAGATGCAACTGCAAAAGAG GTTACATCAACTTTGATTTATCGTAATTTCTTTTGTTTTCCGTATTCCTCAACTTCGTCTTTATGATCTTTGTTTAATGTTGCAGAATCCTGATGCTTAT AAGACAGCATGGAAGTTATTGAAGGTTTCATTTACAATCTCGAGATGAACCATTTGTTACTTTAGCTATAAATTTCCCTCTCTTTAGTTCCGAGAACTCT ATGATTATTATCTAAGTGGTGTTTGCCTTCAGGGTGCAGATGGTGTTCTTGTTCCCGGAGGGTTTGGGGATAGAGGAGTGCAGGGAAAAATTCTCGCCGC TAAGTATGCCCGTGAAAACAGAATTCCCTACCTTGGCATATGTCTTGGAATGCAAATTGCCGTAATAGAGTTCGCACGATCTGTTCTTGGTGTACATGAT GCTAATAGCACTGAATTTGATCCGAATGCCAAAAACCCGGTTATCATATTTATGCCTGAGGTGTAGATATCTGCCATTATATCCGCACTGAATTATCTCG CTCTAATGCTAAGTATAAGGTTAAAGAAGAAAGTTCGTTTTTCCTATTTGTGATTTCTTTGAAATATTTTGTGTAGGGATCGAAAACACATATGGGAGGC ACCATGCGTCTTGGATCTCGGAGGACCTTTTTCCAGACCAAGGAATGCAAATCCGCAAAATTGTGAGTATTATTAGCGCTTTCAATTTTTTATTTTCTAT TTGAAGAAACATTTCCGGTGTGCTTATGAGAATAATATTTGTGTTTCAGTATGACTGAACAATAAATGACTTCATAAATTATTTGGCATGACAATATATA GAAGTATACTTTTAATGGATGACCGTGCCTCTTAGGTATGGCTGTAAAGGCTTCATTGAGGAGAGACATCGACATAGATATGAGGTATCGCATCATCGTG CATGAAATGATCTTGTCGGTTTTGTATAGGACAGAAAATGATCCTTCTCATATGCAGGTGAACCCTGATTTAGTTGCTTGCCTCGAAAATGCCGGTCTTT CTTTTACAGGGAAGGATGAAACGGGTAAACGCATGGAGATTGTTGAGGTACCTAATCATCCTTATTTTATTGGTGTTCAATTCCATCCTGAATTTAAATC AAGACCAGGAAAACCCTCTCCATTGTTCTTAGGTACTTCTCTCGGAACTAGATACAGCTTATAATGTAACTCATTTTCCGAGTTATTATGCATCAATGCA ACTCGTTGTTCCGGCTTTATCCACATGCACTTCCCCCTTTTTTATAACACTTGTTGCTCTCAGTAGCTACATCCTTTTAAACATGTAGAAAAGAGCTATA CCCGTATAGTGTTGCGGATGCATTTTCTAGTCCGAGCGACACAAGTATCGACGCTTATTCTCTTAGAAATGTATTTCATGAATTCGCATGCCTGTGTTTT CTGCAGTGTCCTATTTGATATGATACTTTCTTCATTCTAAATGACATACCTACAGCAAAATTTTGATTGCATTATTTTCATACAGAGAGATCAGTAGTAG TCACGAAAACAACGATAGACATGAGCAAGAAGTATGTCAGAACCAACCATCGTTTAGCGTCAATACGATATTTGAACATTCTATTTGACATTGCTTGCAT TCATTTATATGATTAAAAACAGCACATCGAAAATACGATATTTCAAAAGTACATCATTTATTTGATGTTGAAGAAGCATAAGGAAAGGGATCTAACTTCT AACTAAAATCTTTTCTGCAAATGCATAACAAACAGTGTTCTTAATCATGCCGTAGATTTTGAAATACGATTTATTGATTGCTTGATGATGATGTTGAATG CAGGGTTCATTGCAGCAGCATGTGGAAAACTGGATAATATGTTACAACACCCTTCAAGTGTTGAAAGCAATGGTCTCTCAAAAGCAGTAGGCA
• Tissue: pods
• Gene name: LI_gene_187122;
• Additional information: details;

Expression of Ll_transcript_296554

FPKM

• PAB: 0.7
• PNAB: 1.6
• PS1: 1
• PS2: 0.3
• PS3: 0.3
• PW1: 2.9
• PW2: 0
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296554

• Blastp: CTP synthase from Dictyostelium with 46.5% of identity
• Blastx: CTP synthase from Dictyostelium with 45.77% of identity
• Eggnog: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (By similarity)(COG0504)
• Kegg: Link to kegg annotations (DDB_G0280567)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446966.1)
• Pfam: CTP synthase N-terminus (PF06418.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;