Ll_transcript_297478

• Id Trinity: TRINITY_DN51720_c0_g1_i2
• Name Transcript: Ll_transcript_297478
• Sequence: TATAAACAAATTTGAAATTAAAAAACTATAGGTTTGTGGAAAAAAATATCTAATTGCTCTAAGTATCGTAGTTGGAGTTGCAACGGAACAATATATAGTA ATCTTCTCCTTCCTGATTCTCCGTAATATCTGTTTCCTTCAATTCTTTCTCACTCTGTAACTTGCAAACGCCGCCGAACATGGCTCCGCCGGCGGTAGCT GCAGGCCAAGGAGGGCAACAACAACAACCACAACAAGGTGGCGGAGGTTTCGGGAAAACCATAACCGGAATAATACGCATGGCGGTGTTCTGGTACTTCG CCTCCAAATTCTTCTCTCCCAAACGTGCCCCTACCGATCCTTCTGGCGCTCCTGCTCCTCTCATCTCCAATCTCTTTCAAAAGAATCAGCCTCTCGATAT GTGGGTATATCTTTCCGAGCATGAGAAGTTTAATGACTTTGGTCGTGAAGAGTCTCTTGTATGGCATGAAACCAATATTCCATATGCTTCTTGGGGAGCT GAGAGTACCAGAAATCTTGCTTTGAAATATGACCCATCTGAGAATTTAAAACATAATGGGAGTCTATATGCTCATGTATTCTTTGCACAATCTGGATATT CGCCTGACCCAAATGACCCAGAATATCAGCCCCAGGCAGCATTTGGAAGGACATATGCTGTTGTGAAATACTTACCCAAGTCAAGAGCAGATAAAAGGAG AAGTTTGTTGGGAAGTTCACCAGATTCTAGCGAGGATCCAGTGGCCTCCAAGTGGCAGAGTTTGGACCCTCCCCTTAAATACCAAAGGCTGGGGTAGGGC ATCCCATCAAGACACATATGCCAGTAGGTGTGAAGGTTCCAATCAACTGTGGTTAAATTTAGAGGTTTAGAGCGTCAAGGACAGGCAACTCTGCATTCAG GAGGCCTTGCTTAGTATGAGATTACAAAATTTTCTGTTGAAGCATGGATCTGCATTAACTTAGTTTTTAATTATTTCTGTCAAATAACAACTTACAATTT ACAAGCGAAGTTCTCTTTCTAGAGAACATAAGAACCATGTCACAGATGCTGCACTTTCAGAAGACAGATAGAATTAGAGCTGAATCTCGTGGAGAAAAGA GAGAAAAGGATTTTATGGACGCCATCTATATCTATGCAGCGTAAATGTGGCTGATGATGCTCAAAATGATTCTGAGGACGATGGCCCTGTGGAGTGGGTT TCATACTTGAAACCGAATATAACAATAAACTTGGTTGCTGATTTCACACAGTACTCGAAAAACGGCATCCCACCAAACATTGCTCCATGTATCCTTGGCA TTTACTTCTTTTGCTTATTGGCATTTTGTTTATATTTTTTGGCCATTATATTTTCTTGGTTTCTGGATTCCATGTCTAGTATTAAAAAAGAATATTATTC CTACAATACTATGCAAAATTAATATACTCATTAAAACTAATGGACAATTTTTAGATAATGGAGGTTTATATAATGAAATACCTTTCCGTAACTTTCCTAT GTGTATGCTCTTTCTTTCCTTTTTTGTTTCTTATTTTAACCTCTTCTGTGACCTTATATTGTTGATGCATGTTCAAACTCTCCTTCCCTATTTGGGTGTT ATTATTATGTTGGCAAGTTAACTGATCATATGTCTGAGTTTCTTTAATTATGCATCCCAGACTTGAGTGTTGATCCTATCACAGGGAACTACTACCCGAC TGTTTTTTTCAATGAGTTCTGGTTGCTCAGGGATAAGCTGATACAATTGAATGAGACAGTAACCGAATTAGTGATCAATCTGGAGGTTGGTCCCATTAGT ATGACAAAGTGGCAACTATTCTTGCAGATTGATCAGTCCTTCCAGATTCACCGTAGTTATGGGAGCATGGTTGACGGAGAGGGTGATGAGCTGAAGGTAG TTTAAATTTTTTGTCACAACTTCTATGTAATTAATTCAATGATGCACAATGCCTAGTTGCTGTAGAATGAACTTGGTGGAAATGGATCTTGCATTGCATG TTGAATATTGAAATGACTTCTGACATTTGGGTTCTTAGGCTTTTGTTTTTCATTAAGCTGCCTCCCTTAACCAGTACATCCTTCTCTAAGAAGTTGGCTT CAGCTCCTAAGGGCTCTTGTATTAGGTGGATTAGAGATATAAAACCATTCCTAGACCTCTACCGAATAACCTAGGCTTTTAAGGGAACTAGTTTTGACAG TAACTTATATTAATGGTCCTACAAATTTATGATGGAATTTCAAATGGTCCTGTAACAAATTTCTATGTTGTGCACTTGTGGACCTGTTTCCCACTGAATT TATGAATGCCTTGTTTCTTGAAATGCCTGACTATGTGTTGTTTATATCAGAGGGTATTCTTGGAAGGAAATCCTTACCTCCTGGGAGTTACCATGACTGT TTCTCTACTTCACTCGGTTTTTGATTTCTTTGCTTTCAAGAACGACATCCAATTTTGGAACAAAAATAAATCTATGGAAGGACTCTCTGCAAAGTCTGTT GTTGTGAGCTTTATTTCACAACTTATTGTCTTCCTCTATTTACTTGACCATGATACCTCCTGGATGATTCTTGGTAGCTCTGGAATTGGATGTATTATTG AGTTCTGGAAAATTGGAAAAGCGATGCACATAGAGATTGATAGGACTGGTAGAATACCTATGTTAAGGTTCAGAGATCGAGACTCATATGCACAGAACAA GACAAAGGAATATGATGATAT
• Tissue: pods
• Gene name: LI_gene_187124;
• Additional information: details;

Expression of Ll_transcript_297478

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.2
• PS3: 0.4
• PW1: 0.1
• PW2: 0.1
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_297478

• Blastp: Cleft lip and palate transmembrane protein 1 homolog from Danio with 32.12% of identity
• Blastx: CLPTM1-like membrane protein cnrB from Dictyostelium with 50.78% of identity
• Eggnog: cleft lip and palate(ENOG410XPEV)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432410.1)
• Pfam: Cleft lip and palate transmembrane protein 1 (CLPTM1) (PF05602.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;