Ll_transcript_295875

• Id Trinity: TRINITY_DN51721_c1_g1_i11
• Name Transcript: Ll_transcript_295875
• Sequence: AATAGTATTGCCTATTGGAGAAAATTTGTAACTGAGTATTACTCTCCCCGTGCAAAGAAGCGGTGGTGCTTGTCATTATATAATAACGTTGGGCAGCATG CACTCGGTGTTTTTCCCCAAGCTGCTATGGATGCATGGCATTGCGACATATGTGGCTCCAAATCTGGAAAGGGTTTTGAGGCAACTTTTGAAGTACTCCC TAGACTTAATGAAATCAAATTTGGCAGTGGAATGATCGATGAACTGTTGTTTTTGGACATGCCGCGTGAATATAGATTTCAGTCTGGTATGATGATGTTA GAATATGCTAAAGCAGTTCAAGAGAGCGTATACGAGCAGCTTCGTGTTAGTCGCGAGGGTCATCTTCGTATCATATTTACTCAAGACCTGAAGATATTTT CTTGGGAGTTCTGCGCACGGCGTCATGAAGAACTTCTTCCTCGTAGGTCGGTTGTACCACAGGTATTATTCTGCACACTTTTGCAAGGCTTTCCTCCATC TTAGCAACCAGTCTTTAATCTTTATATGCTTGGGACCCCGGAGTGGTCTACTTTGCATGTTGAGGATACTTTTTTAAACAAACTCGTCATGTGTTTACTG CATTTGTTGTGTCTATTTTATTTAACTAAATATATAATAACTCCTTGCTTCATTATATGCATGCTGCATTGCTGTGTTATTTCTCTTATGTTTGTGTATA CTACTTTGTTTTGGAGAGCACAGTCAGGACAGTGATGTGGATAATTTAATTAATAAAGCATGGGAGAAGCTTTCTTCTTCTATGAAGTTGACTTCTTGGT AGCTAAAGGCAGAAGGTAACCCGTGTGGCATTCAGACATGACAAAGTGCTCGTTGATAGGTGTTAAAATTACAAAAATGACATTACAATGTTTATGTGTG TTTTAGCCTAATGTTAATTTGTAAGCTAACTACTTAGCATGTGATTCATATCGAAAGATATTGTTAAAATGTTCAATTTCTAAATCATGATAGGAAGTTC ATAACAGTGCTTTGAAGATTAAACTCCTAGAAACAAATTGATGGGGGACCTAGTGCACGAGGCTCCCATGTAGTGGACTCTGGGACTGGTAGATGCACGC AAAATTACCCTTACAAGCAAAGAGACTGTTTCGATGAAGAACCGAATTGATACCTCAAACCAAAAAATTAAAACTCAAACAGAGTGATAAGCAGTCTGAA GTTCATAACCTATAATTGAAAAATAGAAATCAGCCTAATCATCAGAAGATTTAGTTTCACAGCTGTCACCACTTTCTTCATCACTTCCAGTAAATTGTAT AATTGTTGAAACCCTGAGCTTACAAGACCTATTCTTTATTATTCTGAATAAGTTACCCTGCTCACGTCACTGTTAGCAAATTAGATGGGTGGGCTTTTGA GGTGTTCACTTTTATCAGCCATTTAAAACAGTTCTAGAAATTTCACTAAAGCGTAGAAAACACTACAAGGCAGCTGGTGAATGCCTCCTAATAATATTTA TTTGTTTTTGGAGAGAGAGATGTGCTAAATATAGGAGCCTCACCTGGAATACCAATTGGCGCAGGCCCCTCTTGTTGTCTAGCACTCTAGCTTCCTCTTA GAACCTCTAACTACATTGAAGATAGTGAACTCTATAATTATGAATTTAATGGGTGTGCACTGACAGTATAAAATACTTTACATTGTTTACACTGTCAACT CACCATCCATCATTCATTGTCCAATGTAGCATGGGGACTTGAAAAATGGTGACATATCTGTATCGGGTATGTACTGGGTACTGTCACTCTTGTGCACTAC TTTGTCAGTTTGTTGTGAATTGTTCCAAAGTTGTCATTTTGGGCTGGAGACTTTGGATTTTCCCCTTTTTTTTCTTCTAAACCATGCCATAATACTGAAC GCTGTATCTCATACTGGGTACCGGTATTGTAACGTATTTATGCAACATAGCTGAAACCAGCAATAGTTAACAAATGAATAACGGGTGATGTGCAGTGTAA AAAATCTTTACATTGTTAATGCACAACTTTTTTTCTCATTTAGTGGTATGAAAAGAGGCTTTAGTTTTTGAGCTAGTTCTTATAATTTACTACTTTGCAG GTCAACCAGTTGGTTCAAGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGGTCAGATGGGGTTTCTCAGCGAGACCTGCAAGCAAACAGCGATA TGGTATTGACAGCTGGGCGTCAGCTCGCTAAGAGTTTGGAATTACAATCGCTAAACGAGTTGGGTCTTTCCAAAAGATATGTGAGATTCTTGCAGATTTC TGAGGTTGTCAATAGCATGAAAGATCTGATTGACATATGTAAAGAGCACAAAGTTGGGCCAACTGAGAGCTTGAAAAATTATCCTCAATTTGCAACTGCA GCCAAGCTCCAGATGCATGGGATAGAACAGCTAGCAAATGTTCAAGGTTTGCCAACTGATCGAAATACACTTAATAAGCTGATGACATTGAATCCAGGAT TGAACAACCAAGTAAACAATAATCATAATATGGTTAATTGTGGTGCTTTGAGTGGGTCAGCACAAGCTGCTTTGGAACTGTCCAACTATCAGAATATTCT CATGAGGCAAAACTCCACGAATTCAAGCCCTGGCCCAATTCAGAGAGAAGGGTCGTCTTTCAATCAAGTGAGCCAGAGTCCCTCTTCATCATTGCAAGGC ACTGCTACTGCTTTAATTCCAGGGTCAATGCAAAATTCTACCAGTAGGGGTTTCCCAAGTCCCAATCATCTACCACCCAGGCTGCAACACCCGCAGCTTC AACAGCGCTCACTTAGTGCAAATAGTTTGCCCATACAAAATTATTCACAGGGATCCCAAGGAAACCAAGCTATACAACAGCAGTTTATCCAGCAACTGCT GCAGGATATGTCAAATAACAACAATGGGGGAGTTCAACCGCAATCTGTTGTTGGTGGACCCAATGCAAATGGGAATAACATGTCCAAAAATGGGTTAGGT TTTGGAGGCCACACTCCATCCATGTCCGGATCTTCTGCCCTTGTTTCCGGAAATAGTGAGCCTGTTTCTATGAGTAACAGCTTCAAGGCAGTTTCAAACA GTGGTTCTTCAGCAGCAGCTGATGGCAACAATGGGTTCTACCAGAGAACATCTGATATGCCGCAAAATCAGCAGATACAGGATATAGCCCATGATTTCAC TGAAAATTCTTTCTTTAACAATGATCTAGATGATAACATGGGTTTTGGCTGGAAGCCATAAACTAACAAAACTTGAGCATGTAGTAATTGGTATATCTTG TTCAACCCTTCATCTTATAATTATTATCCGTGTACAGGATTTACTTCAAATGGCTTCGGCCTCTCCTTTGTGTCAATCTTTTGTGCTTCCAATATGCTTA ATTCATAACATTGATATTAGTGTCTCATGTTATATGCATAAATTCCTTGTCTCCCCACGTGTGGTTCAGATTAGAACACATGGTTGAGTAAATTCTCCAG CAGCTTTATTCAAAACTGTCAAATATTAACATTTGTTTGTGGG
• Tissue: pods
• Gene name: LI_gene_187130;
• Additional information: details;

Expression of Ll_transcript_295875

FPKM

• PAB: 1.7
• PNAB: 1.6
• PS1: 2.6
• PS2: 1.1
• PS3: 1.8
• PW1: 1.8
• PW2: 1.5
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_295875

• Blastp: Probable transcriptional regulator SLK2 from Arabidopsis with 42.03% of identity
• Blastx: Probable transcriptional regulator SLK2 from Arabidopsis with 76.77% of identity
• Eggnog: NA(ENOG41126CV)
• Kegg: Link to kegg annotations (AT5G62090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431317.1)
• Pfam: LIM-domain binding protein (PF01803.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;