Id Trinity | TRINITY_DN51721_c1_g1_i5 |
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Name Transcript | Ll_transcript_295867 |
Sequence | ACAGCATGCACTTGGTGTTTTTCCTCAAGCTGCTATGGATGCATGGCAGTGCGACATGTGTGGTTCCAAATCTGGAAAGGGATTTGAGGCAACTTTTGAA GTACTCCCTAGACTTAATGAAATCAAATTTGGCAGTGGAGTGATTGATGAACTGTTATTTTTGGACTTGCCACGTGAATATAGATTTCAGTCTGGTGTGA TGATGTTAGAATATGCTAAAGCAGTTCAAGAGACCGTATACGAGCAGCTTCGTGTTAGTCGTGAGGGTCATCTTCGTATCATATTTACTCAAGACCTGAA GATATTATCTTGGGAGTTCTGTGCAAGGCGTCATGAAGAACTTCTCCCTCGTAGGTTGGTTGTACCACAGGTAAACCAATTGGTTCAAGTAGCTCAAAAA TGGCAGAGTACAATTGCTGAAAGTGGGTCAGACGGGGTTTCTCAACAAGACCTGCAAGCAAACAGCAATATGGTATTGACAGCTGGGCGTCAGCTTGCGA AGAGTTTGGAATTACAATCGTTAAATGAGTTGGGTTTTCCCAAAAGATATGTGAGATTCTTGCAGATTTCTGAGGTTGTCAATAGCATGAAGGATCTGAT TGACATATGTAAAGAGTACAAAGTTGGGCCAATTGAGAGCTTGAAAAATTATCCTCAATTTCCGACTTCGGCCAAGCACCAGATGCATGAGACGGAACGG CTAGCAAATGTTCAAGCTCTTCCAACTGATCAAAATACACATAATAAGCTGATGGCATTGAATCCAGGATTTAACAACCAAGTAAACAATAATCATAATA TGGTTAATTGTGGTGCTTTGAGTGGGTCAACACAAACTGCTTTGGAACTGTCTAACTATCAGAATATTCTCATGAGGCAAAACTCGATGAATTCAAGCCC TGGCCCACTTCAGAGAGAAGGATCGTCTGTCAATAAATTGAACCAGAGTCCATCTTCATCTTTGCAAGGCACTGCTACTGCTTTAATTCCAGGGTCAATG CAAAATTCTACCAGTAGGGGTTTCCCAAGTCCCCATCATCTACCACCCCGGTTGCAACACCCGCAGCTGCAACAGCGCTCACTTAGTGCAAATAGTTTGC CCATACAAAATTATTCACAGGGATCCâBLAST |
Tissue | pods |
Gene name | LI_gene_187130; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_295867
Blastp | Probable transcriptional regulator SLK2 from Arabidopsis with 63.29% of identity |
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Blastx | Probable transcriptional regulator SLK2 from Arabidopsis with 65.36% of identity |
Eggnog | NA(ENOG41126CV) |
Kegg | Link to kegg annotations (AT5G62090) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431316.1) |
Pfam | LIM-domain binding protein (PF01803.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |