| Id Trinity | TRINITY_DN51728_c0_g2_i10 |
|---|---|
| Name Transcript | Ll_transcript_295117 |
| Sequence | ATGAATTGTTATTAGAGTTTCCTTAAAAAAAACGATATACATCTCCTCCAAGCAAAGCTTATCATAGTGACTTAAGTGATAGAGTGGTATACATGAAGTG CCTTTACCCGCAACCTTTGATGACACTGATTCTTGAATAATAATCATATCACCAAACTCATAAAGATGAAGGCTTTTCTGTATCTGCTAGTGTCCTTAGT TCTGTGTGGTTATGGTGTGAGTAAAGAGTGCACAAACATTCCAACCCAATCACACACATTCCGGTATGAGTTGTTAACATCAAATAATGAAACATGGAAG CAAGAGGTTATGTCTCATTACCATTTGACACCAACTGATGATTCAGCTTGGGAGGATATGCTACCAAGGAGGTTCCTGAGAGAGGATCATCAACATGAAT GGTCAATGATGTATAGGAAAATCAAGAACTTGGGTGTGTTCAATCCACCTAAGGGGTTTCTAAAAGAGGTTCCTTTGCAGGATGTGAGATTGCAAGAGGG TTCAATTCATGGTCAAGCACAGAAAACAAACTTGGAGTATTTGTTAGTGTTGGATGTGGATAGGTTGATTTGGAGCTTCAGGAAAAATGCTGGTCTACCT AATCCTTCTACACCTTATGGAGGTTGGGAAGGTGCTGCGGTTGAGCTCAGGGGACATTTTGTTGGCCATTACTTGAGCGCATCGGCTCTAATGTGGGCGA GCACACAAAATAGTAGCCTGAGGGAGAAAATGTCAGCTCTTGTTGCTGGCCTATCTGCTTGTCAAGAGAAAATTGGAACAGGATATCTCTCAGCATTTCC GTCTGAGTTTTTCGATCGATTTGAATCCATTCAGCCTGTTTGGGCTCCCTATTACACCATTCACAAGATCATGGCCGGCTTGTTGGATCAACATACTGTA GCTGGAAACGCTCAGGCTCTAAAAATGGTGACATGGATGGTTGATTACTTTTATAACCGTGTGCTGAACGTAGTAACACGGCTCAGTATAAATAGACACT ATCAATCACTAAACGAGGAAACAGGAGGAATGAATGATGTCCTTTACAGATTATATAGCTTAACCGGAGATCCAAAGCATCTAGTGTTAGCTCACCTTTT TGACAAGCCATGCTTTCTGGGATTGCTTGCAGTTCAGGCTAATGATATAGCTGATTTTCATGCTAATACGCATATCCCAGTTGTTGTTGGATCTCAAATG CGGTACGAAGTCACAGGAGATCCACTTTATAAGGAAATTGGGACATTCTTTATGGACCTTATTAACTCTTCTCACAGCTATGCAACTGGAGGGACATCAG TCAGTGAGTTCTGGCATGATCCAATGAGAATAGCAGACAACCTAAAAACAACAGAAAATGAAGAGTCATGCACAACTTATAATATGCTGAAGGTTTCGCG CCACCTCTTTAGATGGACCAAAGAAGTCTCTTATGCAGATTATTACGAGCGTGCCTTAACCAATGGTGTACTCAGCATTCAAAGAGGAACAGATCCTGGA GTGATGATTTATATGCTTCCACTAGGACGTGGGGTTTCCAAGGCTAGAACTGGACATAGCTGGGGAACACCGTTTGATTCTTTCTGGTGCTGCTATGGAA CTGGAATCGAATCATTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGGAAGGAAATGACCCGACTCTTTACGTCATTCAGTACATATCAAGCTCATT TAATTGGAGATCTGGAAAGGTTACTGTTAATCAGGCCGTTGTTCCGGCTGCTTCATGGGATCCTTACCTAAGAGTGACATTTACATTTTCTCCTACTGAG GTACCTGTTACATTTGTTTATTCTTATAGCAGAGCTCATTTTGCAAATATTCATTTTAGATACCTCTGAAAGTAAACATCACCCTTATGCTTAATCTGGG ATAAACATGGTCTTTTTTGTCCTTAATCCCCTCTCCACTAAGGCTTTACTTTCAAGTTTCAACAGCATTGATCCTTTTCGTACTTCTTTTGGTGTCTTTA TGATAATTACTTTGTGGTCAATATTTCATGGTCACCTGAGATGTGAAAATGAAATGGAATATAAATTTTGGGAATAGTCTAGTACTAATGTATTAGTGCT AGTAACTTAGGTAAAGAAAAAATGATACACATGATGCTTGCTTTTCTCAAATCTATCTTTCAAATCTTACATTTGTAGAAAATTGGTACTTCATCCACAT TGAACTTTCGAATACCATCTTGGACTCAAACAAATGGCGCCAAGGGGATATTGAATGGTGAAACTTTATCTCTGCCAGCTCCAGGTATGAATCTCTTTTA AGTTCCCTTTTATCAGTTAAAAGTAGATATTCCATTAGTTATCTTAACTGCATGCATGCACACACCACAAGCAAAGAAACTGAGTCCATTCAAGTTAGGA AGCATGCATACCAGATGCTAAAAAACTTATGAGTCCACTAAAGTTAGGATACACTCATACAAACACAAAGGCACTAAATCCTAGTGCTTTCACACTGAAA AAGTTAACAATTGAAACATGGAAATCATATTTTATGTGTTGGACATGTAGGAAATTTTTTATCAGTCACACGACAGTGGAGTGCCGGTGACAAACTGACT CTTCAATTGCCTATTACCCTCAGAACAGAGGCCATAAAAGATGACAGGTCTGAATATGCATCCCTTCAAGCAATTCTTTATGGTCCTTACCTACTTGCCG GTCATACTACCGGAGATTGGGACATTAAAGCTGGGACTAACACAGCTATTTCAGAATGGATCACACCCATTCCTGCCAGCTACAATACTCAACTGATTTC TTTTTCCCAAGACTATTCAAAATCAAGTTTTGTTTTAACAAACTCAAACCAATCACTTACAATGCAAAAGTTACCTGCCCCCGGCACAGATTTGGCTCCT CATGCAACATTTCGCCTTATACTAAAAGATTCTTCCATAAAGCTTTCAACTTTGGAAAATGCTGTTGGTGAATCAGTGATATTAGAACCATTTGATCTTC CAGGAATGAATGTGATTCACCAAGGAGCAGATCAACCTCTTGTGATTTCTTCACAAGTTGAGCCATCTTCTATTTTTCTTGTGGTACCAGGATTGGATGG AAGAAATGAAACCATATCTTTAGAATCTCAAAGCAACAATGGTTGCTATGTGTGCAGTGGTGTAATAAGCTCTAGTGCAGAAGTGAAACTCAGTTGCAAA TCTGATTCTGATGCTACTTTTAACCAAGCAGCAAGCTTTGTTGGATGGAAAGGAATAAGACAATATAATCCTATCAGCTTTGTGGCTAAAGGGACAAACA GGAATTTTCTTTTGGAGCCATTACTCACCTTCAGAGATGAGTATTATACTGTGTATTTCAACATTCAAGACTAATTGGTTAAAGTTTCTATATTTCCCAC AACATCAAGTATGGGGTACTATAAGTTTCATGTACAAATGTTCAAATAATCATTATTCAATTTCATAATGAATAGTTGATAAGTTTCTTGTATCTTCTTG TGCTTGGTTATTAAAGTGGTTGCTATGATTTTCAGAATAAGTAAATAGTTACTCAGCTAAGGTATGGTGACCTTTTTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_187189; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_295117
| Blastp | - |
|---|---|
| Blastx | - |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000361) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413303.1) |
| Pfam | Beta-L-arabinofuranosidase, GH127 (PF07944.11) |
| Rfam | - |
| GO | - |