Ll_transcript_297568

• Id Trinity: TRINITY_DN51729_c2_g1_i21
• Name Transcript: Ll_transcript_297568
• Sequence: CCCTTCTCCACTTTTTTTTCTTTGATTATTTTCTCATACCAATTCGCTTAAATTTTTCCTACCCATTAATCACTTTTACAGGAAAAATTTTAAGCAATGT TGCAGAGGAGATTCTCGTTATTTGGAGGTAGAGATTCTTCTTCTTCTTCATCAAATTTGGTTGGTAACAATTTATCATCAAAGGGTATTGAAGAAGAAGT AGTAGTTCCAATTTTGAAACTTGAAACTGATAGAGAAGTTTATAGACCCGGTGATCCAGTTATTGTGACCATTCATATCTCAAATCCATCAAATGGGTAT TCATTTTTGGTTCAAAGACTCAGTTTTGAGATCAAAGGGATTGAGAAATTGGATACTCAGTGGTTTGCTACACAGAAACCTTTGCCTGGTTCTAAACAAA GGAGAGGTGAACATGTATTTTTAGAGTGCTCAACACCAATCATGATTGCGAATCAGATCGTTAATGCTGGCAGCAGCAAATCATATGTGGTGCGAACTCT ACTGCCTAACATCATTCCACCATCTTACAAGGGTTCAAACATTCGCTATTTGTATTACGTTAAAAGTGCATTAACAGGAGGGTGGCTAATTATGGAAAAC GGGCAATCTCGTCTGGAGAACATAAAGAATATAAATGATTTGGAAGTTCGTATTCCATTACAAATATGGGTAAACCAGAAAAGCACTGGCATTCTAATGG ATGAAGATATTGTTCCCCCAACTACTGTCCAACTCGATATATTTTGGAAAGAGATGAATGGAGATGCCGATTGGGTTCGAGCAAATGATATGTACGATGG TGTTGATGAGGAATATGACAGCTCAAGAGATGATGCCTCCTCTGTTTCCTCATATAACTTGAAAGAAAATCTACACATAGGCTTTGGAAGTTCACTATCA TTGCGATCTTCTGCAAGATCATTGAACAGAGATAGTTCTGCTTTTGAAGGTCAACGAACAAGTTTATCATCAAATATGGCACTTCCCCGATTATCAGTTG CTGAAGTGTTATCTGATTCAGGTCCTGATGCCTTATCAACCCAGAAGTCATTTGGCATTGTCTCCCCAAGTGAGCAACAGAAGTTCAGAAAGCCATATTC GCCAGTTGATGCAGGAGTATCGTCTTCTCCCGACGCAGGACCCGTTGAATCTTTAGCATCAGAAGGCTTCATTAGAGGAAGGTCTTATAACATCAGACTT GATGATCAAGTTTTGCTTAAATTTTCCCCGAAAAATTCGGATTCAACATATTACTTCAGTGATATGATCGGTGGGACTCTTACTTTCTTTCACGATGACG GAGCTAGGAGATGCCTTGAGATCTCAGTAACATTGGAAACTTCGGAAACTATAAATCGGCGATTTGTTCACCCTTCTAGGAGGAATTCCCCTACAATCAC CAAGGTTCAGAGTGATCATCACGAGGTTGTTGCAGATTTGGTGCAGACAAGCTTCCTTTTTTCTGTCCCCATGGATGGTCCAATGTCCTTCTCCACTGCA CATGTATCTGTACAATGGGTTCTCCGGTTTGAATTTTTCAACACTCCAAAGCATGTGGATTGGAGAAAATATGAGCATCCTCTTCTGATTGAGGGAAGGG ACAAAATTGAATGGGTTCTTCCGATTACGGTACATGCTCCGCCGCCTAGAACTCCTGCTTCCGGAACAAGAAATGAAAAGCTCTTCTCTTTGGATCCTAT GTGGGTGCACAATTGAAGTTTACATAATAATGCCTCAAGCTGATTAGTATCACTCAAGCCTTCATCCTTCATGTACAAAATTTTCAAGACAGCGGGCGGG TGAAATGCCGGAATGATCAGTTCTAGCAAGCCGAAATCGCGATAATTTACAAGCTTAATCCTTCTGCCTTTTGTTTCTCGTTTTCCGTATTCGCCTTTGG TGGTGATTCTGTCTGGTAGTTCATCTAGTTCTTGATTTTGTTTTCATTTTCAGACTAGAGTTTGTTGCTGAAATTGTTGATAATTTTTGCTTTAGTTATT AAATTTTCAGTTAAGGATTGAAAGTGTTATAACTTATAATTATGGTTTTGAGTCTGGACATGACACCTTGGATGAACACTTATAATTATAATTGTAGCAC AATTCTTTCATTTCAAA
• Tissue: pods
• Gene name: LI_gene_187193;
• Additional information: details;

Expression of Ll_transcript_297568

FPKM

• PAB: 1.6
• PNAB: 2.4
• PS1: 1.4
• PS2: 1
• PS3: 0
• PW1: 3
• PW2: 2.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_297568

• Blastp: RAB6A-GEF complex partner protein 2 from Homo with 29.05% of identity
• Blastx: RAB6A-GEF complex partner protein 2 from Homo with 29.05% of identity
• Eggnog: RGP1 retrograde golgi transport homolog (S. cerevisiae)(ENOG410YESN)
• Kegg: Link to kegg annotations (9827)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019465438.1)
• Pfam: Rgp1 (PF08737.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;