| Id Trinity | TRINITY_DN51729_c2_g1_i22 |
|---|---|
| Name Transcript | Ll_transcript_297569 |
| Sequence | ACAAAGAAGATTCTCGCTTTTTGGAATCGGAGATTCTTCTTCTTCTTCTTCATCATCCAATTTGGTAGGTAACAATAACAACAACAATTCATCATCAAAG GGTGTTGCAGAAAAAGTGATTCCATCACTGAAACTTGAAACTGATAGAGAGGTTTATAGACCTTGTGATCCACTTCTTGTGACCATTCAGATCTCAATTC CATCAAATGGGTATTCTTTTTTGGTGGAAAGACTCAGTTTTGAGATCAAAGGGATTCAGAAATTGGATACTCACTGGTTTGCTACACACAAACCTGTACT TGCTTCTAACCAAAAGAGAGGTGAACATGTATTTTTAGAGTTCTCGACACCAATCCTGATTGCAAACCAGATCGTTAATGCTGGCACCAGCAAATCATAT GTGGTGCGAACTGTACTGCCTAACATCATTCCGCCATCTTACAAGGGTTCAAACATTCGCTATTTGTACTACGTTAAAAGTGCATTAACTGGAGGGTGGC TAATTCTGGAAAATGGGCAATCTCGTCTAGAGTCCATAAAGCATGTAAATGATTTTGTTGGTTTTGCATTGATTTGCTCTGATTTATGCTGAAATGAAGC ATCAACTTATTTGCATGCTATGAGTCTTGGTTCTAATGATGGTTTTTTTTATTTATAAATCTTGCTTAAAAATGTGTTTTCTTGGGAAGAAGAGTTCTGA GAAGGAAAAAGAAAAAATTGCTTTCGGAGAAGCCTAAATCTCAACACGTTAAACCCGATGATGAGTTTTCCACACTAATGAAAATGGAATATTTTAGAGT AATTAGCCCGAGTGTAGTAGGATTACTAAACTTGAAATGTATATACGCTACTTTCAGTTTGTTGCTGCTATTTGCTTCAATTCTTGAAGTTTGGAGTGGG ATAGTCCTTACAAGTAAAACGCTTTTGCTTTTTCTGTTGTCTATTTGGGCTCATTCATAGACTTGCTTTATTGCCGGATTTCTTTAGTTTATTTTGCTAA GTGGCAACAAGAACAGAAGTCTTTTCCCAGTAGTTGAAGGTGCCTACATGAAGCAAATATTTCCGTTGTGTTTTGTCGTAAACTAATTCTTTAGACAGGC CATACAGATCTAAGAGTCCTTTTTAACTGTTTCACCTAGAGTTTTTATTGGTCTCCGTCTACATTTATGGTTGGTCAAAACAAATTTGCAGTTTAGTCAG GTTACAAATAGGAGAAGTAAAATATTCTAGGCTTTCACATGTTCTTAGGAATCAGGATTAGGATTTTATTGCATCATATGGTAAACAGACCTACACCTAA CTGAAAATATTGTAAAAACTGCTTTCTTTTCGAACACCTTGTGCTGCAGTACCAATCCTCCCGAAACATCTTGGAATCCAAAAACACAAGGCAAAATAAA TTCCAAGAAACATAGCAAGGTATTGAATGCTATAAACTGCACCATTTTCTGGGATGAGTTATAAAAAGACTATAAATGGCAGAAATCCTATCCTATGAAG TTTTAATAAATGAATTACTCTTTTTATGTGATATTAAATATGAATAACTTAAATTTGAAGTTTAATGAATCTTAAATTTGGACTTATGAATCATGTGCTG AATTTGTTCATAGGCTGGTGGGTTTTGCCTACTTACGAATTTCAATAACTGTTGCTAGAATCCTTTATCAACATGATGGAGTTTTTTACATTTGCAATAT GCACTGCATAAAAGAATTTGCAATGGGCATGAAGACGTTATATGCCACGAAAAGTCGTGTAGAAACCCATTTTTGTGGACATTTAATTTGAACTTTTTAA TAAGTTTTGATGTGTCTTTTTTTGTAAGATTTCAAAGCTTGTTTACTAAATCTTTTACCGGAAGTTCGTATTCCAATACAAATATGGATAAACCAGAAAA ACACTGGCATTCTAATGGATGAAGGTTAGCTTGGAAACGATGTATGATAAGATCAAAATTACGTTGTTTGGTCCAGGTAACCGACCCAACTTTGTGTAAT TATAGTTTGCATGTGAGAACCAAATGATAGCAGTGTGAATGCTGCTAGGGAATAGCTCTCATGGGCATTATGTGTTATTGGGTTGGACCTATTTAGCTAT CATGAGTCATGGCAACATTGGTAGTATTGCAACTCAAACGTGGGAGATGTTGTGTCATGACGATGTTGTGTAGTTGTGGGAGATTCTGTTAATACAAAAC CAGGTGGTTTACTTTGATTTTAAGAACACTGATCATAGTGGAGATCTTAAACGTTATATTTATCTTGAAATTTATTTCTTAGCTTTTTAAATTACTGGCT AATGTTTATTCATTCATTTGGTTTGTGGCTTGGCATTTGAATTTTGGATGGGCTGTTTGCATTTTATTAAGAGTAGCCATGTTCATAACGCTTGGAGAAG CTATTGACTTATTCATTGATTTCAGGAAGGGAAAATGTTCGAATGGCAACTCACTATTGTAGTTTCTATTCATGTCTATTAGCATTGATCTTCTGCATTT TGGCTTTCCTAATAACTAGTGGTACCGAAGTTAATGATTTGGCTAGGGCACATATTTAATATGGTTATTGATATTATCACGGTTGTTGCTGCTATTCAAG AAAAGAACACACTTCGGTTAGACACTTAGACTATTGAGCTGATACTCCACTAGTCCACTTGAGCAGCACTATCTTATGTGTTTGGTGTCCTTGTTTTCGG ACTCGTACTTGAGTAGGAGAACATTAGAAGGTTATGTGAGTGATGAAGCCCCTCGGGAGTAAGGAATGGTTTAATTGAGGACCACATAAGTTAGAAGATC CATAGACTTAATGCTTTAAAATTTTGATTCTAGATATAGTGCCAGGCTCGGTTTTGGTTTCTCGCTTAGTCCATTGATGGAGGTCTTCCCAGATTTTGGC CTCCTCCTGACCTCCTATCAATATCGGCCTTAGTTAAACTTCACTTTCCCCCTATCAACCCAGATTTCTTTATTGAAATTAGGTATTTCTCTGCTTATGG TTTCTTTCGATGCAGTAACTTTTACTTACCGCATGCTATCCTTGGACCCTTGATATAACATAGAATCATTTTGTTACAGGTTAGAGCAGATGATATGTAT GATGGTGTTGATGAGGGATATGACAGCTCAAGAGATGATATCTCCTCTGTTTCTTCATATAATCACTTGAAAGGAAACCTACTCAGAGGCTTTGGAAGTT CACCATCATTGCGATCTTCTTCCACAAGATCATTGAACAGGGATACTTCTGCTTTAGAAGGTCGTCGAACAAGTTTATCTTCAAATATGGCGCTTCCCCG ACTATCAGCTGCTGAGGTGTTATCTGATTCCGGTCCCGAAGTCATTTGGCATTGTCTCCCCAAGTGAGCAACAGAAGCTCAGAAAACCGTTTTCTCCAGA TGGTGCAGGAGGATCGTCTTCGCCAGAAGCTGGAGCCATTGAATCTTTAGCATCAGAAGGCTTCATTAGAGGAAGGTCTTATAACATCAGACTTGACGAT CAAGTTTTGCTTAAATATTCCCCTAGAAATTCTGACTCAACTTATTACTTCAGTGATATGATAGGAGGGACTCTTACATTTTTTCACGAAGAAGGAGCTA GGAGATGCCTTGAGATCTCAATAACATTGGAAACTTCGGAAACTATAAATCGGCGATTTGTCCACCCTTCTCGGAGGAATTCACCTACAATCACCAAGGT TCTGAGTGACCATCACGAGGTTGTTGCAGATTTGGTGCAGACAAGCTTTCTATTTTCTATCCCCATGGATGGCCCAATGTCCTTCTCCACTGCACATGTA TCCGTGCAATGGGTTCTCCGCTTCGAATTTTTCACCACTCCGAAGCATGTGGATTGGAAAAAATATGAGCATCCTCTTCTGATTGAGGGAAGGGACAAAA CCGAATGGGTTCTTCCAATTACTGTGCATGCCCTGCCACCAAGAACTCCTGCTTCTGGCACAAGAAATGAGAAGCTCTTCTCTCTGGATCCTATGTGGGT GCACAATTGAAGGTTAGAGCAGATGATATGTATGATGGTGTTGATGAGGGATATGACAGCTCAAGAGATGATATCTCCTCTGTTTCTTCATATAATCACT TGAAAGGAAACCTACTCAGAGGCTTTGGAAGTTCACCATCATTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_187193; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_297569
| Blastp | - |
|---|---|
| Blastx | RAB6A-GEF complex partner protein 2 from Homo with 30.41% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449621.1) |
| Pfam | - |
| Rfam | - |
| GO | - |