Ll_transcript_297552

• Id Trinity: TRINITY_DN51729_c2_g1_i5
• Name Transcript: Ll_transcript_297552
• Sequence: AAAAGAAAAGAAGAAAACAAAATATTCATTTCAATGTGATAATTGAATCAACCCTCTCAATAATATATCATCACTCAGATCAGATCCAACACCCTTTTCC TCTGATCATTGTTGGAAAAATTTTAAGCAATGTTGCAGAGGAGATTCTCGTTATTTGGAGGTAGAGATTCTTCTTCTTCTTCATCAAATTTGGTTGGTAA CAATTTATCATCAAAGGGTATTGAAGAAGAAGTAGTAGTTCCAATTTTGAAACTTGAAACTGATAGAGAAGTTTATAGACCCGGTGATCCAGTTATTGTG ACCATTCATATCTCAAATCCATCAAATGGGTATTCATTTTTGGTTCAAAGACTCAGTTTTGAGATCAAAGGGATTGAGAAATTGGATACTCAGTGGTTTG CTACACAGAAACCTTTGCCTGGTTCTAAACAAAGGAGAGGTGAACATGTATTTTTAGAGTGCTCAACACCAATCATGATTGCGAATCAGATCGTTAATGC TGGCAGCAGCAAATCATATGTGGTGCGAACTCTACTGCCTAACATCATTCCACCATCTTACAAGGGTTCAAACATTCGCTATTTGTATTACGTTAAAAGT GCATTAACAGGAGGGTGGCTAATTATGGAAAACGGGCAATCTCGTCTGGAGAACATAAAGAATATAAATGATTTGGAAGTTCGTATTCCATTACAAATAT GGGTAAACCAGAAAAGCACTGGCATTCTAATGGATGAAGATATTGTTCCCCCAACTACTGTCCAACTCGATATATTTTGGAAAGAGATGAATGGAGATGC CGATTGGGTTCGAGCAAATGATATGTACGATGGTGTTGATGAGGAATATGACAGCTCAAGAGATGATGCCTCCTCTGTTTCCTCATATAACTTGAAAGAA AATCTACACATAGGCTTTGGAAGTTCACTATCATTGCGATCTTCTGCAAGATCATTGAACAGAGATAGTTCTGCTTTTGAAGGTCAACGAACAAGTTTAT CATCAAATATGGCACTTCCCCGATTATCAGTTGCTGAAGTGTTATCTGATTCAGGTCCTGATGCCTTATCAACCCAGAAGTCATTTGGCATTGTCTCCCC AAGTGAGCAACAGAAGTTCAGAAAGCCATATTCGCCAGTTGATGCAGGAGTATCGTCTTCTCCCGACGCAGGACCCGTTGAATCTTTAGCATCAGAAGGC TTCATTAGAGGAAGGTCTTATAACATCAGACTTGATGATCAAGTTTTGCTTAAATTTTCCCCGAAAAATTCGGATTCAACATATTACTTCAGTGATATGA TCGGTGGGACTCTTACTTTCTTTCACGATGACGGAGCTAGGAGATGCCTTGAGATCTCAGTAACATTGGAAACTTCGGAAACTATAAATCGGCGATTTGT TCACCCTTCTAGGAGGAATTCCCCTACAATCACCAAGGTTCAGAGTGATCATCACGAGGTTGTTGCAGATTTGGTGCAGACAAGCTTCCTTTTTTCTGTC CCCATGGATGGTCCAATGTCCTTCTCCACTGCACATGTATCTGTACAATGGGTTCTCCGGTTTGAATTTTTCAACACTCCAAAGCATGTGGATTGGAGAA AATATGAGCATCCTCTTCTGATTGAGGGAAGGGACAAAATTGAATGGGTTCTTCCGATTACGGTACATGCTCCGCCGCCTAGAACTCCTGCTTCCGGAAC AAGAAATGAAAAGCTCTTCTCTTTGGATCCTATGTGGGTGCACAATTGAAGTTTACATAATAATGCCTCAAGCTGATTAGTATCACTCAAGCCTTCATCC TTCATGTACAAAATTTTCAAGACAGCGGGCGGGTGAAATGCCGGAATGATCAGTTCTAGCAAGCCGAAATCGCGATAATTTACAAGCTTAATCCTTCTGC CTTTTGTTTCTCGTTTTCCGTATTCGCCTTTGGTGGTGATTCTGTCTGGTAGTTCATCTAGTTCTTGATTTTGTTTTCATTTTCAGACTAGAGTTTGTTG CTGAAATTGTTGATAATTTTTGCTTTAGTTATTAAATTTTCAGTTAAGGATTGAAAGTGTTATAACTTATAATTATGGTTTTGAGTCTGGACATGACACC TTGGATGAACACTTATAATTATAATTGTAGCACAATTCTTTCATTTCAAA
• Tissue: pods
• Gene name: LI_gene_187193;
• Additional information: details;

Expression of Ll_transcript_297552

FPKM

• PAB: 2
• PNAB: 4.6
• PS1: 5.2
• PS2: 3.5
• PS3: 7
• PW1: 3.6
• PW2: 3.9
• PW3: 5.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_297552

• Blastp: RAB6A-GEF complex partner protein 2 from Homo with 29.05% of identity
• Blastx: RAB6A-GEF complex partner protein 2 from Homo with 29.05% of identity
• Eggnog: RGP1 retrograde golgi transport homolog (S. cerevisiae)(ENOG410YESN)
• Kegg: Link to kegg annotations (9827)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019465438.1)
• Pfam: Rgp1 (PF08737.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;