Ll_transcript_296365

• Id Trinity: TRINITY_DN51746_c1_g1_i9
• Name Transcript: Ll_transcript_296365
• Sequence: CGCCATTCCTTAGATCCAATCTAAACTTATTTTGGCATCTAATGAAACATTATTATATTTTTATTTTGCAAACCCTAACTAGTGCTTTTTCTTGAGCCTT TTTTTCTTCGTATGTTACTATTATTACTGTTAATCTACTATCATTGAACGACATGCATAATTGAGGAGAGAAGAAAAAAAGATAGAAGACCCAAAAACAT GGGACAGTTGATGGCGAGGAAATAGTTATATAAATGGTTGAGCTATGTTTAGTTTAACCTCACAAACATAACCATTCCTCACTTATTGCATGGTTCTCTT CATTCTCTCGCTCTCATCACACCCTTATTACCCTCTTCTTATTCTTTCAACTTTCAACTTTCAACTTCCAACTTTCAACCACATTCATACAGATTAAGGG TACGTACCCTCTCTAAGTCTCTTTGTTCCTATCTTACTTTTTTGCTTGCTTCTACCAGGTCCTTTTGGATTTGTTTTGCTTCATAGATCTTATTCTTGCT TCTGTGTTTTTGGTTTCTATTTGTTGTTTTTGGATGCCCTCAAAAGCTTGTTATGATGACTGTGAAGTGCTCATTCGGTGTGTTATCTTGCAAGCTTTTC ACTTTTTACCATTTTACATTCAAACTCAATATGGGGTTTCAAGTTTATTAAAAAAAATCTTCCCTTTTTCTGTTGAAAAAAATGGTTTGTTGACTTTGTT CTATGATATATTCATGCTTTGAATCACGTTTCTATGGTATTGTCTTGTATTTGCTCCTTTGATCAATGTAAAACATAGACACATGCAGCTTCACAGCCAT TGGTTAGTAATGAGAGGTGAGAACAAAAGACAGCTAAGTTGATTTGAAATCACTGTCAAAAGAATAATGAGTACTTTTCTTACATGTCAAGAAACCAGAT CACATTACTAACTACTAAGTGATGCACTTTCCCTTCTTCATCAATGGCAAATATGCCATGGCTGTGAGATCCAGCATTTCCTTTTGCCTTTTTTAGTCAA TAATGGGGTTGGAATGGTCCTCACTAGGATGGCTAGGAGGACCAATTTTTGTTGGGTCCCAGTATCATGTGAAGATCATAAATGCTGTCTCTCAAAAAAT GTAAAGTAGCTACCAAGTGATGTTAGTATTAGATTCTTTTCTATTTTATTTATGAGCATCACACACTCATATCTATTTACTTTTAACTTTTTGATATATA AAAAACATTATTCTCTATATATATATATATATATATATAAACCATCAATCTCTTTTTCTATTTACCAATTTTTAACTTCTCATAATTGGATCTGTCATTG GAATTTGTGTCTTGTCAGGTAGATCTGCTTGGGGAACTGTGTTAATAGTTTTCACTATTGATGTGTGATGTGTTGCAATTAATAATCAATACTGTTTCTT GTCTTTTCTTGGTTATTGATTGCTAATAATGCTAACAATAACATTCTAAATTTCTAACACACAACTCATCTTAACACATACTTCATATGAGGTGATCTGA ATCTTGGTGATGATTATCAGACATATTCCTTGATTTTTGCTTGTTCTTGTTCTTGTAGGCAATATGAATTATGTGATCTGAAAATGTGGTGATCCTAATC CTTGGTTTGCTTCTTTAGTTAGCTGGTTGAACTGGAACTAGGAGGGTATGATAATTCAGATTAAGTAATTTTCTTAAGTTGAATGAGGTGGTTAGAGACT TAGAATGGCTCTTGTACAAGGTGTCATTTTTCTTGAGGATTACTTATGACTGAAGAGTAATGATAACATGTTACACTTAAATATTAGATACTACTGTTTT TTTTGGTGAAGATTTATAGGCTTATTTTCAAAACTACAAAAGTTTTGTATATGAGTTGGTAAAGGAAGTGGCATAGTTGCATGCACTGAAATTGAGTATG CTGCAATTTTGCAGATAGCTAGTTAATATTTCTTGAACCATGAAGCATAAAGATGGAAAACCAATCAACCTTCCGAACAGGAAGAGGAATGTAACTTTGG CAATCACAGTTATTGCTCTATGTGGTTTAGCCTTCTATCTGGGAGGAATGCAATGTAATTCTCAAAATGGTGGGTTTGTGACAAATACCGTTGAGAAGGC CCTTGATCTTCCGAAGCAATCAGGTTCTCTGCAAGTTAGACCCATCAATTTCCCTGAATGCAGCACTGACTTACAAGATTACACCCCATGCACGGATCCG AAGAGATGGAGAAAGTACGGAACTTATCGGCTTACTTTGTTAGAAAGGCATTGCCCTCCACTTTCTGAAAAGAAAGAATGCTTAGTTCCTCCACCAGATG GATATAAGCCTCCAATCAGATGGCCAAAGAGTAGAGATGAATGTTGGTACAGGAATGTGCCATATGATTGGATCAACAATGAGAAGTCTAATCAGCATTG GTTGAGAAAGGAAGGGGAGAAGTTCCTCTTTCCTGGTGGAGGTACTATGTTCCCCAATGGTGTTGGTGAATATGTTGATCTAATGGTAGATTTGATCCCA GAAATGAAAGATGGGACTGTGAGAACTGCCATTGATACTGGTTGTGGGGTTGCTAGCTGGGGCGGCGACTTGTTGGATCGTGGGATTCTAACAATTTCAC TTGCTCCAAGAGATAACCATGAAGCTCAGGTTCAATTTGCTCTGGAGCGTGGTATCCCGGCAATGCTTGGAGTTATTTCTACTCAGAGACTTCCATACCC ATCAAACTCCTTTGATATGGCTCATTGCTCTAGATGCCTTATCCCATGGACAGAATTCGGTGGAATTTATCTTCTTGAAATACACCGTATTCTGCGTCCT GGAGGATTTTGGATTTTGTCCGGTCCACCTGTCAACTACGAGCGTAGGTGGCGTGGATGGAACACGACTGTTCAAGAGCAAAGATCGGATTATGAGAAGT TACAGGACTTACTCACTTCAATGTGCTTCAAATTGTACAATAAAAAGGATGACATTGCTGTATGGCAGAAGTCTAAAGATAACAATTGCTATGATAAACT TCCTAGTGAAACCTATCCACCAAAATGTGATGACAGTTTTGAACCAGATGATGGATGGTACATTCCACTTCGAACTTGTGTTGTGGTTCCCGAATCCAAA TATAAGAGATCCGCGCTCACATACATGTCTAAGTGGCCGGAACGATTGCACGCTACCCCTGAACGGATTGCAGCCATTCATGGTGCTAGTGCTAGTACCT TTACTCATGATAACAGCAAGTGGAAAAAGCGTGTTCAACATTACAAGAAGTTGTTTCCTGAACTTGGAACTGAAAAGGTAAGAAATGTGATGGATATGAA TACACTGTATGGAGGCTTTGCTGCATCCTTGGTTGATGATCCTTTGTGGGTCATGAATGTGGTATCAGCCTATGGAACTAATTCACTCCCTGTGGTTTAT GATCGAGGACTTATTGGAACCTATCATGACTGGTGTGAAGCTTTTTCAACATATCCTAGAACATATGACCTCCTTCATCTTGATGCACTTTTCACTGATG AAAGTCACAGGTGTGAAATGAAGTATGTGTTGCTGGAAATGGACAGAATATTAAGACCTGGTGGGCATGCTATAATTCGAGAATCCACTTATTTCATTGA TGCCATTGCAACCATTGGCAAGGGTATGAAATGGGCATGCCGTAAAGAAAACACTGAGTATGGTGTTGAGAAAGAAAGGATATTGATATGCCAGAAAAAG CTATTGCACTAATCTAACATTGGTTCGAGACAACAAATTGTAATCATAATTCCAAATGATTCCATAGCCACTCTCATCAACAAAGAATGCTTCATCATTC TATAATATATAGACACCAAAAATATATTCTATAGCATGGGTAGTGCAATAATCTGATTTTGTTACTTCATATAGAAGATTTTCTTATAGATATTCTTTAT AAGGCATCAATTGTATCAGGTATGTTTTTTATCTATTTTTTTTTCGCTGTGTAAATTCCTGGTGAATTCATGGGAAGGAAAGAAAGTTCCTAGTCCCACA GAATTCTTTACAAGAGAATATTACAAGTTTTTGTATTCATATTGGGCACTGTTACATTAATACTCTCATAATTTGTAATTCAATGTCTTGGACCGATGTT ATGCATTTTATTTTTATGGCAAATTAGTGGCTGAAGTCCAATTCAAATGAAT
• Tissue: pods
• Gene name: LI_gene_187319;
• Additional information: details;

Expression of Ll_transcript_296365

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.1
• PS2: 0.1
• PS3: 0.1
• PW1: 0.5
• PW2: 1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296365

• Blastp: Probable methyltransferase PMT20 from Arabidopsis with 72.05% of identity
• Blastx: Probable methyltransferase PMT20 from Arabidopsis with 71.79% of identity
• Eggnog: Methyltransferase(ENOG4111CGI)
• Kegg: Link to kegg annotations (AT1G31850)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421310.1)
• Pfam: Putative S-adenosyl-L-methionine-dependent methyltransferase (PF03141.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;