Ll_transcript_294899

• Id Trinity: TRINITY_DN51747_c1_g1_i1
• Name Transcript: Ll_transcript_294899
• Sequence: ATTTTATGCCTGTTGCTGAATTGAGTGATTCTAGTAGAGGTTATGTTGTGAATGATACATGTATAGTTGAGGCTGATATTGCTGTACGTAAGGCTAGTGA TTACTGGTCAAATGACTCAAAAAAGGAAACTGGTTATGTTGGACTGAAAAACCAAGGAGCTACTTGTTACATGAATTCTCTCCTTCAGACATTGTACCAC ATTCCTTATTTTAGAAAGGCTGTGTACCATATGCCTACAACCGAGAATGATATGCCATCGGGGAGCATTCCTTTGGCATTACAGAGTTTATTCTACAAGC TGCAGTACAGTGACAGTAGTGTAGCAACTAAAGAGTTGACCAAGTCTTTTGGATGGGATTCATATGATTCATTTACGCAGCATGATGTCCAAGAGCTTAA TAGGGTTCTTAGTGAAAAGCTGGAGGACAAAATGAAGGGAACTGTTGTGGAAGGCACCATACAACATTTGTTTGAAGGCCACCATATGAACTATATTGAA TGCATCAATGTAGACTATAAATCGACAAGAAGGGAGTCATTTTATGATCTGCAGCTTGATGTCAAAGGATGTAGAGATGTGTATAATTCTTTTGACAAGT ATGTGGAAGTCGAGCGACTTGAGGGTGATAACAAGTATCATGCTGAGCAGTACGGTTTACAGGAGGCTAGGAAGGGTGTCTTGTTCATTGATTTCCCACC TGTCCTCCAGCTTCAATTAAAACGGTTTGAATATGATTTCATGCGTGACACTATGGTAAAGAAAAAAGAGAGACCAGAAACCAATGTCTAGTGTCTATGG CCAGACGGAAGCTGGCAGCATGCCGGAGAAGAGGACCGAGAGAAAGAAAGGGGATTGTGGCTTGAACTTGCCTTGCCTCCATATGCAACACACGATCGGG AAAGAAACTGTGAAGGCATCATATCCGATGGCTTTCACTGCCGTGCTTTGGGTTTTTGGCTGGTCTCTGGATCAATGACCGCTACGAGTTCCCCTTGCAA TTAGATCTTGATAGGGACAATGGCAAGTATCTATCTCCTGAAGCAGATAGAAGTGTTCGCAATCTGTATACACTTCACAGTGTCTTGGTTCATAGTGGTG GGGTTAATGGCGGACACTACTATGCTTATATAAGGCCAATTCTATCAAATCAGTGGTTTAAATTTGATGATGATCGAGTAACGAAAGAAGATGCAAAGAG GGCCTTAGAAGAACAGTATGGTGGCGAGGAAGAGTTACCTCATACCAACCCTGGGTTCAACAACTCTCCCTTTAAATTTACAAGGCACTCAAATGCATAT ATGCTTGTGTATATACGTGACAGTGACAAGGACAATATAATTTGTAGTGTGGATGAGAAAGACATTGCCCAACACCTCATAGTAAGGTTAAAGAAAGAAC AAGAAGAAAAAGAGCTGAAGAGGAAGGAGAAGGAAGAGGCTCACTTGTACACTATCTTAAAGGTTGCACGTGATGCAGATCTGCACCAACAGATTGGAAA GGATATATTTTTTGATCTAGTGGATCATGATAAAGTACGGACTTTTCGCATTCGAAAACAAACTCCCTTCATCACTTTTAAGGAAGAAGTTGCTAGAGAG TTTGGTATACCTATCATGTCCCAACGATTTTGGTTGTGGGCAAAGCGCCAAAATCATACTTACCGGCCAAACAGACCACTGACTCCTCAGGAAGAAACAC AAACTGTTGGACATTTAAGAGATGTTTATAATAAGGCAAATAATGCAGAGCTGAAGTTATTTTTGGAAGATGGACAGGACTTTGGGCTTATTCGTCTTCC CGAGAAGCGAAAAGAAGATTTGTTGCTATTCTTTAAACTTTATGATACTTCAAATGAGACACTCCGGTATATTGGGAGGTTGCATGTGACAGGTAGTGGG AAGCCCATGGACATATTGACAAAACTAAATGAAATGGCAGGATTTGCTCTTGATGAAGAAATTGAACTTTTTGAGGAAATAAAATATGAACCTCGTGTCA TGTGCGAACATGTTGACAAGAATGTCACATTCCATGCCAATCAGCTCGAGGATGGAGATATTATTTGCATCCAGAAGGCTCTTGTTGGAAGTGGTGAGCA ATTTCGCTATCCGGATGTTCCTTCATTTTTGGAATATGTTCATAATCGTCAGGTCGTACGCTTCCGGTACTTGGAGAAACCAAAAGAGGATGAATTCAGT CTTGAGTTGTCAAAGATTCACACATATGATGATGTTGTAGTAAGAGTTGCTGAATATCTTGGTTTGGATGATCCTTCTAAAATTAGACTCACATCTCATA ACTGCTACTCCCAGCAACCTAAACCACAGCCTATCAAGTACCAAGGAGTAGAACATTTGTTTGACATGCTGACTAACTGCAATCAGACTTCTGATATTCT GTACTATGAAGTATTGGATATCCCACTGCCGGAATTGCAATGCCTTAAAACACTTAAAATTTCTTTCCACCATGCTACCAAGGATGAAGTTGTGATTCAT ACTATCAGATTACCGAGGCAGAGTGCAGTGGAAGATGTAATTAATGATCTCAAATCAAAGGTGGATTTATCACATCCTGGTGCAGAACTTAGGTTGCTCG AAATTTTGTATCACAGGATCTATAAGATTTTCCCACCCAGTGAAATGATTGATAATATCAATGATCAGTATTGGATCTTAAGAGCAGAAGAGATACCCAA AGAGGAGAAAAATCTAGGCCCTCATGACCGTTTGATCCATGTTTATCATTTCATGAAAGACACTGCACAAAATCAGCAACTTCAGAATTTTGGAGATCCT TTTTTCCTGGTTATTCATGAAGGTGAGACACTTGCTGATATTAAATTGCGGATACAGAAAAAGTTGCATGTTCCAGATGAGCACTTTTCAAAGTGGAAGT TTGCATTTGTGTCACTTGGTCGTCCTGAGTACCTTCAAGATTCAGATATCATTTCTACCCGGTTTCAGAGAAGAGATATCTATGGCGCTTGGGAGGAATA TCTTGGATTGGAACATGCTGACAATTCTCCAAAAAGGTCCTACGTTGCCAACCAGAACCGTCACTCATTTGAGAAGGCTGTAAAAATCTACAATTAGGAA GGATACACATCCTTCTAAATCAGTCAACATAATAATGTGTCATGCTAGTGGGAACTTGCACAGCTTTCTTAAGGTGGCAGAAGAAATGTAGAGATGCTGT CAATATTCTCATTCTCATTCACCTATTTAAATTCATAGTTTTGTAGCTTAGGGGACCGGTATAGCCTTGATCGGATCATTGGTTTGGTTCTTAGAGTTGC TTCTGAACTCATTCTCTCAAGCCCTCATTTCTTTGCTGCTTAGGAGATATACTTCTAATTCCCATGTTATGCTAGTACATAAGATTTTGGGTTGGGTTTT TGTATAGAAGTTATGGTCATATAATTTAACTGTTATCTATGTCTGGTTCTTCCTTTCTAGGCTTTTCGTTTGCTTTGCTTGGAGATGTGAGAAGATCAGG ATTGTGTACATGTTTTTGCAGGGTTGTTAATGTAATTTGTTCTTATGCCATTTTTGACCTAAGATTTTGATTAAAGGCCTACTGATTTGTGTTAAAAGGA AACACTGTACTACCCTTAGTCTCATTCTCACAAATGCTGTTTCTCTATTTTCTTCTATATTGCCAAAAGTGCCTTTGTTC
• Tissue: pods
• Gene name: LI_gene_187324;
• Additional information: details;

Expression of Ll_transcript_294899

FPKM

• PAB: 0.5
• PNAB: 2.2
• PS1: 1.4
• PS2: 2.1
• PS3: 3.3
• PW1: 1.6
• PW2: 1.8
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_294899

• Blastp: Ubiquitin carboxyl-terminal hydrolase 12 from Arabidopsis with 75.63% of identity
• Blastx: Ubiquitin carboxyl-terminal hydrolase 12 from Arabidopsis with 77.18% of identity
• Eggnog: ubiquitin carboxyl-terminal hydrolase(COG5077)
• Kegg: Link to kegg annotations (AT5G06600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461344.1)
• Pfam: ICP0-binding domain of Ubiquitin-specific protease 7 (PF12436.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;