| Id Trinity | TRINITY_DN51747_c1_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_294915 |
| Sequence | ATTTTATGCCTGTTGCTGAATTGAGTGATTCTAGTAGAGGTTATGTTGTGAATGATACATGTATAGTTGAGGCTGATATTGCTGTACGTAAGGCTAGTGA TTACTGGTCAAATGACTCAAAAAAGGAAACTGGTTATGTTGGACTGAAAAACCAAGGAGCTACTTGTTACATGAATTCTCTCCTTCAGACATTGTACCAC ATTCCTTATTTTAGAAAGGCTGTGTACCATATGCCTACAACCGAGAATGATATGCCATCGGGGAGCATTCCTTTGGCATTACAGAGTTTATTCTACAAGC TGCAGTACAGTGACAGTAGTGTAGCAACTAAAGAGTTGACCAAGTCTTTTGGATGGGATTCATATGATTCATTTACGCAGCATGATGTCCAAGAGCTTAA TAGGGTTCTTAGTGAAAAGCTGGAGGACAAAATGAAGGGAACTGTTGTGGAAGGCACCATACAACATTTGTTTGAAGGCCACCATATGAACTATATTGAA TGCATCAATGTAGACTATAAATCGACAAGAAGGGAGTCATTTTATGATCTGCAGCTTGATGTCAAAGGATGTAGAGATGTGTATAATTCTTTTGACAAGT ATGTGGAAGTCGAGCGACTTGAGGGTGATAACAAGTATCATGCTGAGCAGTACGGTTTACAGGAGGCTAGGAAGGGTGTCTTGTTCATTGATTTCCCACC TGTCCTCCAGCTTCAATTAAAACGGTTTGAATATGATTTCATGCGTGACACTATGGTAAAGATCAATGACCGCTACGAGTTCCCCTTGCAATTAGATCTT GATAGGGACAATGGCAAGTATCTATCTCCTGAAGCAGATAGAAGTGTTCGCAATCTGTATACACTTCACAGTGTCTTGGTTCATAGTGGTGGGGTTAATG GCGGACACTACTATGCTTATATAAGGCCAATTCTATCAAATCAGTGGTTTAAATTTGATGATGATCGAGTAACGAAAGAAGATGCAAAGAGGGCCTTAGA AGAACAGTATGGTGGCGAGGAAGAGTTACCTCATACCAACCCTGGGTTCAACAACTCTCCCTTTAAATTTACAAGGCACTCAAATGCATATATGCTTGTG TATATACGTGACAGTGACAAGGACAATATAATTTGTAGTGTGGATGAGAAAGACATTGCCCAACACCTCATAGTAAGGTTAAAGAAAGAACAAGAAGAAA AAGAGCTGAAGAGGAAGGAGAAGGAAGAGGCTCACTTGTACACTATCTTAAAGGTTGCACGTGATGCAGATCTGCACCAACAGATTGGAAAGGATATATT TTTTGATCTAGTGGATCATGATAAAGTACGGACTTTTCGCATTCGAAAACAAACTCCCTTCATCACTTTTAAGGAAGAAGTTGCTAGAGAGTTTGGTATA CCTATCATGTCCCAACGATTTTGGTTGTGGGCAAAGCGCCAAAATCATACTTACCGGCCAAACAGACCACTGACTCCTCAGGAAGAAACACAAACTGTTG GACATTTAAGAGATGTTTATAATAAGGCAAATAATGCAGAGCTGAAGTTATTTTTGGAAGATGGACAGGACTTTGGGCTTATTCGTCTTCCCGAGAAGCG AAAAGAAGATTTGTTGCTATTCTTTAAACTTTATGATACTTCAAATGAGACACTCCGGTATATTGGGAGGTTGCATGTGACAGGTAGTGGGAAGCCCATG GACATATTGACAAAACTAAATGAAATGGCAGGATTTGCTCTTGATGAAGAAATTGAACTTTTTGAGGAAATAAAATATGAACCTCGTGTCATGTGCGAAC ATGTTGACAAGAATGTCACATTCCATGCCAATCAGCTCGAGGATGGAGATATTATTTGCATCCAGAAGGCTCTTGTTGGAAGTGGTGAGCAATTTCGCTA TCCGGATGTTCCTTCATTTTTGGAATATGTTCATAATCGTCAGGTCGTACGCTTCCGGTACTTGGAGAAACCAAAAGAGGATGAATTCAGTCTTGAGTTG TCAAAGATTCACACATATGATGATGTTGTAGTAAGAGTTGCTGAATATCTTGGTTTGGATGATCCTTCTAAAATTAGACTCACATCTCATAACTGCTACT CCCAGCAACCTAAACCACAGCCTATCAAGTACCAAGGAGTAGAACATTTGTTTGACATGCTGACTAACTGCAATCAGACTTCTGATATTCTGTACTATGA AGTATTGGATATCCCACTGCCGGAATTGCAATGCCTTAAAACACTTAAAATTTCTTTCCACCATGCTACCAAGGATGAAGTTGTGATTCATACTATCAGA TTACCGAGGCAGAGTGCAGTGGAAGATGTAATTAATGATCTCAAATCAAAGGTGGATTTATCACATCCTGGTGCAGAACTTAGGTTGCTCGAAATTTTGT ATCACAGGATCTATAAGATTTTCCCACCCAGTGAAATGATTGATAATATCAATGATCAGTATTGGATCTTAAGAGCAGAAGAGGTAAATTTTTGTATGAC ACATTTATATTATGGAGAACTTTGTTTGACAGTTATGGGGATGCATTGTTTCATATTAGTATTCAAATGCCAGGACGGTTTCTTATTAATAGTTTAGATT CAAGATTTTGTTTGACAAATTCGCTACTTATTTTGGACCTGATAGGCATGACTTTAGTTTCTATCATCTTCAGTTGTTTGACAAAAAATGGGTTATAACA ATGTTTCAAAACCAGAGAAGGAGAGGAGCCAGAGCGTGGAAAGTTTTTGCTTGAACCAGATGATGTTATAGATACATTTAAAATATAAATGAATGGGGAG GGATCAAGTTACTCCAAGAGTAAGTCTAAGAGACTTACTCCTCATCCTAACCATCAATTCTAGAGAAATCCAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_187324; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_294915
| Blastp | Ubiquitin carboxyl-terminal hydrolase 12 from Arabidopsis with 80.6% of identity |
|---|---|
| Blastx | Ubiquitin carboxyl-terminal hydrolase 12 from Arabidopsis with 80.6% of identity |
| Eggnog | ubiquitin carboxyl-terminal hydrolase(COG5077) |
| Kegg | Link to kegg annotations (AT5G06600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461344.1) |
| Pfam | Ubiquitin carboxyl-terminal hydrolase (PF00443.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |