Ll_transcript_294917

• Id Trinity: TRINITY_DN51747_c1_g1_i13
• Name Transcript: Ll_transcript_294917
• Sequence: ATTTTATGCCTGTTGCTGAATTGAGTGATTCTAGTAGAGGTTATGTTGTGAATGATACATGTATAGTTGAGGCTGATATTGCTGTACGTAAGGCTAGTGA TTACTGGTCAAATGACTCAAAAAAGGAAACTGGTTATGTTGGACTGAAAAACCAAGGAGCTACTTGTTACATGAATTCTCTCCTTCAGACATTGTACCAC ATTCCTTATTTTAGAAAGGCTGTGTACCATATGCCTACAACCGAGAATGATATGCCATCGGGGAGCATTCCTTTGGCATTACAGAGTTTATTCTACAAGC TGCAGTACAGTGACAGTAGTGTAGCAACTAAAGAGTTGACCAAGTCTTTTGGATGGGATTCATATGATTCATTTACGCAGCATGATGTCCAAGAGCTTAA TAGGGTTCTTAGTGAAAAGCTGGAGGACAAAATGAAGGGAACTGTTGTGGAAGGCACCATACAACATTTGTTTGAAGGCCACCATATGAACTATATTGAA TGCATCAATGTAGACTATAAATCGACAAGAAGAGAATCATTTTATGATCTTCAGCTTGATGTCAAAGGATGTCGGGATGTGTATGATTCGTTCGACAAGT ATGTAGAAGTGGAACGGCTTGAGGATGATAACAAATATCATGCGGAGCATTATGGTTTACAGGAGGCTAGGAAGGGCGTGTTGTTCCTTGATTTTCCACC TGTCCTTCAGCTTCAATTAAAACGATTTGAATATGATTTCATGCGTGACACTATGGTAAAGATCAATGACCGCTACGAGTTCCCCTTGCAATTAGATCTT GATAGGGACGATGGCAAGTATCTATCTCCCGAAGCAGATAAAAGTGTTCGCAATCTTTATACACTTCACAGTGTTTTGGTTCACAGTGGTGGGGTTCATG GTGGACACTACTATGCTTATATAAGGCCAATTCTATCAAATCAGTGGTTTAAATTTGATGATGATCGAGTAACGAAAGAAGATGCAAAGAGAGCCTTAGA AGAACAGTATGGTGGTGAAGAAGAGTTGCCCCATACAAACCCTGGGTTCAACAACTCTCCCTTTAAATTTACAAGGCACTCAAATGCATATATGCTTGTC TATATACGTGACAGTGACAAGGAGAAGATAATTTGTAGTGTGGATGAGAAGGATGTTGCCCAACATGTCAGAGTAAGATTACAGAAAGAACAAGAAGAAA AAGAGCAGAAGAGGAAAGAGAAGGAAGAGGCTCACTTGTACACTGTTATAAAGGTTGCACGTGATGCAGATCTTCACAAACAGATTGGAAAGGATATATT TTTTGATCTAGTGGATCATGATAAAGTGCAGAGTTTTCGTATTCGGAAACAAACTCCATTTATCACTTTTAAGGAAGAAGTTGCTAGAGAGTTTGGTGTA CCTGTCATATACCAGCGATTTTGGCTGTGGGCAAAGCGCCAAAATAATACTTACCGGCCAAACAGACCACTGACACCTCAGGAAGAATCACAATCTGTTG GACAGTTGAGAGATGTTTACAATAAGGCAAATAATGCAGAGCTGAAGTTATTTATGGAAGTGGAGCAGGATTTTGGGCCTATTCCTCTTCCTGGGAAGCG AAAAGAAGATTTGCTGCTATTCTTTAAGCTTTATGATCCTTCAAATGAGACACTTCGGTATATTGGGAGGTTGCATGTGACAAGCAGTGGGAAACCCGTG GACATTTTGACAAAACTAAATGAAATGGCTGGATTTGCTCTTGATGAAGAAATTGAACTTTTTGAGGAAATCAAATCTGAACCTCATGTCATGTGCGAAC ATGTTGACAATAATGTCACATTCCATGCAAATCAGCTTGAGGATGGTGATATTATTTGCATCCAGAAGACACAGGTTGGAAGTGATGAGCAAATTCGCTA TCCAGATGTTCCTTCGTTTTTGGAATATGTGCATAATCGTCAGGTAGTGCGCTTTCGGTACTTGGAGAAACCAAAAGAGGATGTATTCAGTCTTGAGCTG TCAAAGATTCACACATATGACGACGTTGTAATAGGAGTTGCTGAGCATCTTGGTTTGGATGATCCTTCTAAAATTAGACTCACATCTCATAACTGCTACT CCCAGCAACCTAGACCACAACCTATTAAGTACCGAGGAGTAGAACATTTGTCTGACATGCTGACTAACTGCAACCAGACCTCTGATATTTTGTACTATGA AGCATTGGATATCCCTCTGCCGGAATTGCAATGCCTTAAAACGCTTAAAATTGCTTTCCATAATGCTACCAAGGATGAAGTGGTGATTCATACTATCAGA TTACCAAAACAGAGTGCAGTGGAAGATGTAATTAATGATCTCAAATCAAAGGTGGATTTATCACATCCAGGTGCAGAACTTAGATTGCTCGAAATTTTGT ATCACAAGATCTATAAGGTTTTCTCTCTTAACGACATGATTGATAATATCAATGATCAGTATTGGACCTTAAGAGCAGAAGAGGTTCCCGCAGACGAGAT AAATCTAAGCCCCCGTGATCGGTTGATCCATGTTTATCATTTCATGAAAGACACTGCACAAAATCAGGTGCAAGTTCAGAATTTTGGAGATCCGTTTTTC CTGGTTATTCATGAAGGTGAGACGCTAGCTGATATTAAATTGCGGATACAGAAAAAGTTGCAAGTTCCAGATGAGGACTTTTCAAAGGTACAGATGCATG CCTAAATTCAATTTTCAGCATTTTAAGGCATTTTCATTCTTGGTTAGTTGATTTCCTATGGTACATTGAGGTAAATTGCTAATTGTGTTCAAAATTTGTT TATTTTCTCTCTAGTATTTAAACTACCATGTTTGAATTTTATTCATTTTTTAGTGGATAGCTAACAGTTTTTTTCTGCATAAGTGAATGTGTACGTCTAT TTTTTGTCTTATCAGTGGAAGTTTGCATTTGTGTCACTTGGTCGTCCTGAATACCTTCAAGATTTGGATATTGTTTCTACTCGGTTCCAGAGAAGAGATA TTTATGGTGCTTGGGAGCAATATCTTGGACTGGAACATGCTGACAGTTCCCCAAAACGGTCCTATGCTAACCAGAACCGCCACTCATTGGAGAAGGCAGT AAAAATCTACAACTAGGAAGGATACTCATCTTCTCAACCAGTCAATACAATAATGCTTCATGCTAGTGGGCACTGGCAGCTTTCTGAAGGTGGCTGAAGA AGTTCAGAAACGATGTCAATATTCTCTCATTTTCAAGAAATACTCATCTGTTTAAACTCATAATTTTGTAGCTTAGGGGACAGGTGCATAGCCTGGAACA GTGCTTAGAGATGCTTGAGAACTCATTCTCTCAAGCACTCATTTCTTTGCTGCTTAGGAGATGCACATTATAATTACCCTGTATTTTAGTACATAAGATT TTGGGTTGGGTTTTGTATAGAACTTAAGGGCATACTTAACTGTTGCCTATGTCTGGTTCTTCCACTCTAAGCAGTTTCCTTTGCTTGGAGATGTGGGAAG ATTGGGATTGTGTATATGCTTTTTTGCAGGATTGTCAGTGTAATTTTTTAATATGCCATTTTTGACTTTGAATTTTGATTGATTAAAAAGGGCCTAATGA TTTGTTTTAAAAGAAACACTAGACTACCCTTACCTTGTTTCTCATCCTCACACTCTTCCTCGAGTTTCTGCAATATTGCCGGAAGTACTTGTATATAAAA TGACTGGCACTTGTATAATTATATGACAAAAAGAT
• Tissue: pods
• Gene name: LI_gene_187324;
• Additional information: details;

Expression of Ll_transcript_294917

FPKM

• PAB: 0.3
• PNAB: 0.3
• PS1: 0.6
• PS2: 0.3
• PS3: 0.5
• PW1: 0.8
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_294917

• Blastp: Ubiquitin carboxyl-terminal hydrolase 12 from Arabidopsis with 79.93% of identity
• Blastx: Ubiquitin carboxyl-terminal hydrolase 12 from Arabidopsis with 79.93% of identity
• Eggnog: ubiquitin carboxyl-terminal hydrolase(COG5077)
• Kegg: Link to kegg annotations (AT5G06600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427986.1)
• Pfam: Ubiquitin carboxyl-terminal hydrolase (PF00443.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;