Ll_transcript_294620

• Id Trinity: TRINITY_DN51750_c1_g2_i7
• Name Transcript: Ll_transcript_294620
• Sequence: CACTAAATTCGCTCTTTTTTTTCCTTGTGGGAGTGTGAAATCCTTCTGATCCTCAACTCAAGTGGGTCATTCTGTGTGGTCCCCACACTTCCCACTTGTT GTCTTTGTCTCTCTGCTTAGCTGCCACCCTTTAATGTTATGTTCAAAACCCCTTGTCTCTTCCATTTTTGTGCTTCTGCATCATTCAACTCAAACAAAGC TTCATTTTTTTCTCTATATGGGTCCTCACTGATCTTGGTTCCTCTGATTCCTTAAGGTTATGTATGGTTCAAAACTTCTGCTTGTGTTTTTTGGATCAGT GTTGTCTGGTCTATAAGGGACTACTACAATTCATTTCAAGCATCAGGGCCAGCTTGATTGAGAAAGTTTAATGTAAAGTTTTTTGCTTGTATCAGTTTTA TGTTGTTCTTTGGATTTGATTGTATTGGTTTCTGGAGTTTGGAGCTGTTTGCTATAAAAAGGGGTACTTTTTAATAACTTTGTTTTAGACTTAGATTGAT GCTTGGTGTAAGACAAGATTGGAAATGTTTCCACTTCTTTAGCATTCATTACTATAGCTTAGTAAAAAGATATGAAGAACATTCTTAAGAAGCTTCATAT CATGTCTAACCAATCAGAAGATGCAGCAGCACAAGGGTCTACTACTTCATCTAGGGGAAACAAGTCCAATGATGGTTCATCTACCCCGAAAAAGATTTCT AATTGGTTGCATTCAGTTTCCAATAGGCAGAGTCAAAGTCCTCCATCTCCTGACTTGGCTATAGGAGAAAGAGGGGAACTATTTGATTCAGTGAGCAGCG GTGTTGGTGTTGGTTTGGATATTGTTTCTGATTCGGCGAGGCACGATTCGGGGTCTAGCAGTTCAAGGGATCCTGAAGTGGAGGAAGAATATCAGATACA ATTGGCTTTGGAGATGAGTGCAAAAGAGGATCCTGAGGCTGTTCAGATTGAAGCTGTTAAGCAGATCAGTTTAGGATCTTGTGACCCTGATAATACACCA GCTGAAGTCGTGGCGTACCGATACTGGAATTACAATGCTCTTGGTTATGATGACAAGGTCTCGGATGGTTTCTATGACCTATACGGGATTTTAACTGAGT CAACCTCTGCAAGAATGCCTTCCCTAGTAGATCTACAAGGAACACCAACCTCAGATGGTGTCACATGGGAAGCAGTCTTGGTCAATAGGGCTGCAGATTC CAATCTGTTGAAACTTGAGCGAAAAGCGCTAGAACTGGCAGAGGAGTTAAAAACCGATTTTGAAGTAGTCATAAATAGTAATTTGGTGATCAAGATTGCA ATATTAGTGTCTGAGTATATGGGTGGACCTGTTGAAGATCCTGCAAGCATGACTAGAGCATGGCGGAGTCTTTGTTACAGTCTAAAAGCAACCCTTGGTA GCATGGTTTTGCCACTTGGTTCACTAACAATTGGATTGGCTCGACATCGTGCATTGTTATTCAAGGTATTAGCTGATAGATTGGGCATTCCGTGCCGGTT GGTGAAAGGACTGCAATATACTGGTTCAGATGATGTGGCAATGAACTTTGTCAGAATTAATGATGGAAGAGAGTACATTGTTGACCTAATGGCAGATCCT GGAACACTTATTCCGACTGATGCAACTGGGTCACATATCGAGTATGATGAGTCTTCTTATGTAGCCAGTCATTCATCAAGAGACTTTGATTCCTCCCATA TAGCATCGTTCAGCAGCGGAATTGGAAGTTTGTCTGAAGAAACTTCGGAATTTGGGACACCGGATAAAGGAAACAGACCAAAACATCTTGCATACACCGA GAAAGAATCTGAAGTAAGCAAGCCTGCTACAAGCAATGAAGAATTAAAGAAACCATCAATTGAATTAAAAAACACTACCAATGCAGAGAAGATCATAGTG GGTGAATCTCCTAGCAGACCTAATTATCCATATCTGCATGGAAGATCTCCATCTTGGACTGAAGGCATCAGTTCCCCCGCAGTACGTAGAATGAAAGTCA AAGATGTTTCACAATATATGATTGACGCTGCTAAGGAGAACCCAAACCTAGCTCAAAAACTTCATGATGTTTTACTCGAAAGTGGTGTTGTTGCTCCTGC AAACTTATTTTCTGAAATTTACCACATAGGTTCCTCATCCGAGGCCAGTTTTCCAACTGAAGAAAAGGATGAATATAAACAGGGAAGTGTTCATCAAGAA ACTAAAGCTTTATTTTTGCCTCCTTTGCCTCACCCCAGACTTCAACCCAAAGTAAGTCCAAGCATTCAGGTGGAGCATTCTAAGCCTGTAGAAGGTTTAG GAATCGGCCTTCCTCTTGAAGCAAAGGCAAGTTCCGGACAGCACATACCATCTCAGGAAGAAGCAACTCAGATAAAATATGGGAAAAATGTACCGGTTGC TGCTGCAGCAGCTGCTGCTGCTGTTGTTGCATCTTCTATGGTAGTTGCTGTGACTAAGTCAAGCACTGAATCAAATATTGAGATTCCAGTAGCAGCAGCT GCTACAGCTGCAGCTGTTGTAGCAACTACTGCTGCTGTCAGTAAACAGTATGAGCAGGGCAGCCAGAGTGATGGAGATACGGATGGTGCTGGTTATGAGC CGAAGGGTGGTGAAGGAGCAAACTCAGAAGGTGAGAGAATATCTGATAGATCAGTAGGTAATGAGAGCACAAGATCTGAATCCGCGCTAGATGATGTTGC TGAGTATGACATTCCATGGGAGGAAATCACGTTGGGCGAGCGTATTGGACTTGGATCATATGGGGAAGTGTACCGAGGTGAACGACATGGAACTGAAGTT GCTGTAAAGAGGTTTCTTGATCAAGATTTCTATGGTGAATCACTTGAAGAGTTCAAAAGTGAGGTCCAAATAATGAAAAGACTGAGGCATCCAAATGTTG TTCTCTTCATGGGAGCTGTAACTCGACCACCAAATCTTTCAATTGTTACTGAATTTCTTCCCAGAGGGAGTTTGTATAGATTAATTCACCGACCTAACAA TCAATTAGATGTTCGAAGGCGGTTGAGGATGGCCCTGGATGCTGTAGGGATCTTGTTGTGTTTTAATTGCAGTGAATCTTCATTCAGCCAATTATTGCGA TAATAAGCACTGAATCTAACATGATATAACCTTTCTCTTCTTATTATCCAGGCCAGAGGAATGAACTATTTGCACAATTGCACTCCAATGATAGTGCATC GTGATTTGAAGTCCCCGAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTTTGTGATTTTGGTCTATCGCGAATGAAGAATAGTACATTTCTTTCTTC CAGATCAACTGCAGGAACAGTAAGCTATCATGATTTTTATTTCCTTAGTACAACTTCTGTCTAAATCCGTCGCTTTTGATCTATTTATTCCTCCATCCTC TTATTTGGTTGTTCATTTTGTTACATATTTTAAATGAAATCTTTCTAAGTATACACACACAAACCCAGACATGTATATATGTTAACAAATTTTCTGCCCG ATAAATTTCGAAAGCACTTTTTCCTCCTAATTTTTGCATTGCTTATGACATTCATTTTCTTGTATTATCATTCTGTTGTCTTCATTGATGAAAGAAACTA AGAAAGCTTTGAACTCACTGCAATTGGATATATTAGTCACTTCATTATGTTTAATATATTTCAGGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAG CTTTCAGATGAAAAGTAATCTACATTGTTAAAAGCCTTACTCAAACCTATCTGCTCATTGGTTTGTGCCACTTTTTGAACCATATTTGTGATGATATAAT AAGCTGTTTCATTTTGTAGGTGTGATGTTTATAGCTATGGGGTCATATTATGGGAGCTCTCTACTTTGCAGCAACCATGGGGAGGAATGAATCCAATGCA AGTTGTTGGTGCTGTGGGTTTCCAACATCGCCGTCTCGACATTCCAGATGATATAGACCCTGCTGTTGCAGATATTATCAGGCAATGCTGGCAGACAGAT CCGAAGTTGAGACCAACATTTGCTGAAATCATGGCTGCTCTGAAGCCATTGCAGAAGCCAATTACTAGCTCTCAAGTGCCTAGACCAAGTGCTCAGTCAT CAAGAGCTGCCGAAGACGCTGCAGGATAGGAAACATTTATACAGCTAACCAAATCTTTTCATCTTTCTGCCAAAAACGTGAGAGCAAGTTGTAGAGTATA TGCCATTTAGGATGAGAAAAGGTGATTGGTTACCATTCTCATCTAAGGTTGTGATTCTTTTCACTCCTCCTTTTCCTTTCTTCTTTTCAATGCTTGTTTC CTTTTCTCCTCTGCGATCTTCAGTGCCACCATCGTCAGGTTGTGGCATTTGTTTGTACAAAATTCTTTGGAAAATGTTGTAAAAGGTGTCTAAATTTTGA TGTCCATAGCAGCTTTAACTTGAACAGGAAGAAAGGATTAAGAATGAGTGAAAATTGTTTGGTGCTTCAGTGACCTTGTAAATTGTGAAATTGTATTAAA TTTTGAGTCCATTTGCATTATATGGGAAAAGTTTTACCTGTCATATTGGGACTATATACTATATCTTCAGCTATTTGGGGCACCTTCCGGCTTTTAGCTT CTGCTGGTGGCAATTCTATTATGCTCCATCCCAGCATTTTTTGTTTTGTATAGCGTGTGACATTATATATAGGGAGAATGTAACTGTGAATCTCATGAAG GAATGATATAATGTTTCCATTCTTTTTTTCCTTTTATGCATACTACATTGGATATAAACACTTGGATTCAAAGCAGTCCTGTTGGTTCTACCTGCTATCT ACTTTGTATGAGAACAATTTTACCAGAAGTTTCTGATATTGACATCATGTAAAGTAATCATGCTTATACAACAAG
• Tissue: pods
• Gene name: LI_gene_187342;
• Additional information: details;

Expression of Ll_transcript_294620

FPKM

• PAB: 0.3
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.5
• PS3: 0.3
• PW1: 0
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_294620

• Blastp: Probable serine/threonine-protein kinase SIS8 from Arabidopsis with 57.29% of identity
• Blastx: Probable serine/threonine-protein kinase SIS8 from Arabidopsis with 55.39% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT1G73660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446148.1)
• Pfam: Ethylene-responsive protein kinase Le-CTR1 (PF14381.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;