Id Trinity | TRINITY_DN51751_c0_g1_i1 |
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Name Transcript | Ll_transcript_295278 |
Sequence | AACAAAACAATTTTTATTTTTTTCTCTCTTTCTCTTTACCAATTTCCTGTACCCACATAATTATTTCTCTTCATTCTTCTCCCTCCAAAATCGCTTCAAT CTCTTCCCAATTTTCCCCCATTTCATTTTCCATCCATTCCACCCTCACATCACCGCCACCGTTAACTTAATTTATATTTATATATCTCACTAATTCATTC ATTCTAAAGATCTAGGGTTTCGGAACCTCAATATCTGAACCGCATTAATCTAATTGTTATACGCTACTTCGATTCAAAGCCATTCATAATTCGTATTTTT GCTTGATCTGTTATTGTGAATGAGAGATAATATATTCGTTTAATTGAAGAACATGGAGGTCATTACTGATGCGGCGTCGTTTGATGCCGAATTGTTGCAG CTCCCGGAGTTTTCATCTCCGGCTCTTAAGTCTAACCTCAATTTCGTTGATAAGATCTTCGATCAGTGGTTGTCGCTTCCCGAAACTGTTCGATCGGTAA CCTCATTGCTCAATGAGGCAAAGTCGGGTGCTCCCTTGAATGTCCCGGGGAACTGTTCTAGCCCAAATGCTGCAAGTAGTTCTTTGCCTTCCATGTTTCC TGCTGGCACTGCTCCACCTCTTTCCCCGAGAAGTACATCTGGTTCCCCTCGCATAGTGAAACAGAGAGCTGGCCTATCTAACTTGAGTTCCCCCTTGAAA GTTGTCAGTGAGCCAGTTAAAGAAGTTATACCTCAGTTCTATTTTCAACATGGACGTCCACCTCCAAATGACCTGAAGGAACAATGTTTGTTTAAAATCG ATCATTTGTTCCATGATCACTTGGATGGGATGCGGATTCATGAACTCAAATCAGTTACGAGGGAAGTATGCAAGCTACCATCTTTTTTCTCCACCTCTCT TTTCCGAAAGATTGACAATGGAACTGGTATTGTAACAAGGAAAGCATTTATTGATTATTGGATTAATGGCAACATGTTGACGATGGATATAGCAACTCAA ATATACACAATTTTAAAACAACCACAGCTGAAGTATCTTACTCAGGATGATTTTAAACCCGTCCTACGTGAGCTTTTAGCAACACATCCTGGGCTGGAGT TCCTGCAGAGCACACCTGAGTTTCAAGAGAGATACGCTGAAACTGTAATATACAGAATATATTATTAC BLAST |
Tissue | pods |
Gene name | LI_gene_187345; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_295278
Blastp | Probable serine/threonine protein phosphatase 2A regulatory subunit B''gamma from Arabidopsis with 68.28% of identity |
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Blastx | Probable serine/threonine protein phosphatase 2A regulatory subunit B''delta from Arabidopsis with 66.3% of identity |
Eggnog | Protein phosphatase 2, regulatory subunit B(ENOG410XRBK) |
Kegg | Link to kegg annotations (AT5G28900) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439906.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |