| Id Trinity | TRINITY_DN51751_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_295281 |
| Sequence | CATCGTTATATGTCATAATTTTCTGCTCCTATAACATTTTTTCTCATTGCAAAAATAAATACTACAAGCAAACGCAATTTTCTATCTCTCTCTTTCTCTT ACAATTCCCCTTACCCACACAATTACTTCTCTTCATTCTTCTCCCTCCAAAATCGCTTCAATCTCTTCACAAATTTTCCTTCATTTCACGTTCCTCTCAT TTTCTATTCAGATCACCGCCACCGTTAACTTAATTTTATATTATTTATTATTTCGCTAATTGATTCATTCTAAAGATCTAGGGTTTCGGAAGCTCGATAT CTCAACCACATTAATCTAATTGTTTTATACTTCGCTACGATTCAAATTCATTGAAATTCGTGTTTTCCTTGATCTGTTATTTGGTGTGTTGTGAATGAGA GATAAGAGATTGGTTGTTTAATTGAAGAAGATGGATTTCGTTACTGATGCGGCGTCGTTTGACGCCGAATTGTTGCAGCTCCCTGAGTTTTCCTCTTCGG CTCTCAAGTCTAACATCGATTTCGCCGAGAAGGTCTTCGACCAATGGTTGTCGCTTCCAGAAAGTGTTCGATCGGTAACCTCACTTCTCAATGAGGCAAA GTCAGGTGCTCCCTTGAATGTCCCGGGGAATTGCTCTAGTCCAAATGCTGCAAGTAATTCTTTGCCTTCCATGTTTCCTGCTGGAACTGCTCCACCTCTT TCACCGAGAAGTACATCTGGTTCTCCTCGCATAGTAAAACAGAGAGCTGGCCTATCTAACTTGGGTTCCCCTTTGAAAGTTGTCAGTGAGCCAGTTAAAG AAGTTATACCTCAGTTCTACTTTCAACATGGACGCCCACCTCCAAATGACCTGAAAGAAAAATGTTTGTTTAAAATTGATCATTTATTCCATGATCACTT GGATGGCCTACAGATACATGAATTCAAATCAGTTACTAAGGAACTATGCAAGCTGCCATCTTTTTTCTCCACTTCTCTTTTCCGAAAGATTGACAATGGA ACCGGTCTTGTAACAAGGAAAGCATTTATTGACTATTGGATTAACGGGAAAATGTTGACGATGGATATAGCAACTCAAATATACACAATTTTAAAACAAC CACAGCTGAAGTACCTAACTCAGGATGATTTTAAACCTGTGCTACGTGAGCTTTTATCAACTCATCCTGGCCTGGAGTTTCTGCAAAGCACACCTGAGTT TCAAGAGCGATATGGTTTGCATTTTCTTGATATAACCTTGTGTTTTAGAGGTTCATGTAATCGTAAATTGAGGAAATGAGTTTAAGATTCTGGTAATGCT TAGTTCTGGAATGATCGGACCCAGGAGAATGAGAGTTTGGAGGGTAGAGATTCGTAAGAAATAAAGGGAAGCCAAAAGAAGGGAGATAAGGAGTTTGATT AGTTAGATGGGATTAGAAATAGGAGTGGGAGCCTAGCTGAAATTTGGGGAGAAGGGCAGAAGGTGCGGTATGAAGATTTTTTAGCTTTCGGAACTGAGCT AATAAAGAGGAATCCCTTTGTGTAAATGAGAACAAGGGAAGAACAGGGGAAGTAGAAACTGCTTGAAGCGGAGAAGCAGCGCTGCAGAGGAGGGAGAAAA CGGTGAAGGAAAGGTCCAAGTGTTCGTGGCGGCAGCCATGGCTTGATATCATGTAAATGAGAATAAACAAGACGAAGGAGAGAGAGAGAGAACAAAGTTG AACAGTAACTCTGAAATGTATTAATGAATCAGTTAGTTACAATGAGTAAGTTGAGTTACTTATCTAGAGGCTACAAACTAACACTGAGTATAGGCTAACA ATCTAGTGTACTCTCTAACAGCATTCAGAACTAACTAACAATATTAGTTAACTAAGTAACAACAATATAACAACTAATACAATATTCTAATACTTTGTCA GAGGGGAAGGGGAACCTTGGAATGAGCATTTTCTCCTATTCCTGCTCAGATCCAATCAGCCACAGTAGATTTTTTCTTTCTGTTTTCTGGCTTCTCAAGC TCTCTTGTTGGTTCATAAACACTTCCAAACTTTATTTGCTCTGAGGAATTTGTATTTCACTCGCTCATCATCAATTTTCTTTAAGAGACATACCTAGGAT GTGGTCACTTTGTGATTCTTGATGGTATGTTTTTTATATATTCTTATTTGCTGATACTAGATAAGTGATTAACTCTATGTTTAGAAGTAAGAAGGAAACA TAGCTGTGGTCTGTAGGCAATAAAATAAGTTGGACTAGGAGTAAGGACACACACAGAGTAAGTTAACATATAAATAAGGAGGAAACATATAGCTGAGGAG CATAAGCTTATCTAAAGTAGAAGTGGAGAAAATACATATCTAATATAAAGGGATAAATGTCACCCAAAAGTGAGCTTTAAATAATATTGACACATGTCAC TGAATCAAAACATTGGTGTATTTGGGTCTGGGGGGTGCATATCATATCTAGAGGTAGTTGATCAAAATAAACTTCATTCTTGAGGGGTCCTAAAGGCTAA AGTAGTGCATAAATTTTTATCGTGGGCTTTTGAACTCTAGCTGTGAGATTGATCCATTGATTTTCTTGCTTACATTTGTAGATTTTCTTCAGAAAGAGCA TTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_187345; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_295281
| Blastp | Serine/threonine protein phosphatase 2A regulatory subunit B''beta from Arabidopsis with 67.44% of identity |
|---|---|
| Blastx | Serine/threonine protein phosphatase 2A regulatory subunit B''beta from Arabidopsis with 66.67% of identity |
| Eggnog | Protein phosphatase 2, regulatory subunit B(ENOG410XRBK) |
| Kegg | Link to kegg annotations (AT5G28850) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428390.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |