Id Trinity | TRINITY_DN51753_c4_g3_i4 |
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Name Transcript | Ll_transcript_296820 |
Sequence | TTTCAATAATCAGTTTGCTTTTCTCTTTTTTTCCCTCTTTTTGTCTTTCTCTTTGTGACTTTCGGATACTAGAACGTATCATAATCACTAAAAATGATAA AAAAAAAATAAGGCAAAAAGAAACATAAAATCTTAGTTGATTTTCTTTTTTTCCTGGATGACGATTTATTCTTAAGCATGTAAAAAATGTACCTATTCTT AAATTTATAACAGGGTTCCAAGATAGGTGATCTATATGTCACCATTGCGCTGGAGGAAAACTACCAACTGCCTCCTGAAGCTCTTCCAAGAAGTCCGGCA AACCAAACTGCTGTTGCAGTACAAAAGGCTGAAGATGTAATGAGTACCATGCTTGCCAAGGGTTTCATTTTAGGAAAGGATGCAGTCAACAAGGCGAAAA CCTTTGATGAACGCCATCACTTGAGCTTAAATGCTTCTTCCACAGTCGCTTCCATTGATCAAAAAATTGGTTTAAGTGATAAACTAAGCATTGGAACAGC TATTGTCAATGAAAAGGTGAGAGAGATGGATGAAAAGTTTCAGGTTTTTGAAAGGACGAAGTCTGCTATTGCTGTTGCTGAGCAAAAGGCAAGTATTGCT GGATCTGCTATCATGAGCAACCCTTACGTATTAACCGGAGCTTCATGGATGTCAAGTGCCTTTAGTGCTATAGCAAAGGCAGCTGGAGATGTCAGCATGA AGACTAAGGAGAAGGTTGAACAAGCTGAGTTGGAAAAGAAAGAGATCATTTACAATGAAAGGAAAGAGACCATTGATGAATTTGGACGAATACACTTCGA ATCTTCGGATGTTGGACCTGCAGTAGTTCCTGTCAACTCAGGCGATGATAAGAAGCTGGAAATTATATAACATGAAGTGACTCAAAATGCTATACATCGT CATCAGCATAGTTGGATTGATTTAGTTAGCATAGTTATTTTGGTCTTGGGTTGCTGCAGGTTTGTTGTACAACACTACAGTGACAATTCTTCTTGATTGT TATAGTGATGTTAAGATTTGTCTGACATGTGATTCTTAAATATAGCAAACATTCTTTAAAAAAAGATTGTTATTTGTATATTATCTTACTACTTTTGAGT TTTTAAATCATTCACTTGACCCTG BLAST |
Tissue | pods |
Gene name | LI_gene_187357; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_296820
Blastp | Binding partner of ACD11 1 from Arabidopsis with 63.78% of identity |
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Blastx | Binding partner of ACD11 1 from Arabidopsis with 58.05% of identity |
Eggnog | actin cytoskeleton protein(ENOG4111ICI) |
Kegg | Link to kegg annotations (AT5G16840) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420198.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |