| Id Trinity | TRINITY_DN51754_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_297431 |
| Sequence | CTTGCAAGCTTCAGTTCTATGTTTCCTGAAAAGCTTCTATCTGCCAAAGCTGGACGTGAGTTTTTTGCATCGTGAATATGGTCTTTCTGTTGAAAATGAT ATCGCAGGCATTCAATTGAAAAGCTTCAAATCACGATCTATTGGGGATGTTGGGGAGAGTGCACGACTTGATTTTCAACTGGAGCTTAATGAAATTCATC TTCTTAGAGAAGCTGGTTCTTCCATCCTAGAGATATTGAAGTTGGATTTGGTCTCTTTTGTGCGTGTCTCAGTACAGCCAACCTCGCCTGTTAGAGCTGA AACTGAAATCAAGTTTGGAGGTTTACAGTGCAACATCATAATGAGCAGGTTAAAGCCTTGGTTGCTCCTCCATGGGTCCAAGAAGAAAAAAGTGGTACTT CGGGAAGAAGCTCCTGCTGTTGTAAAACCACAATCAACTGAAAGCAAGCCCATCATGTGGACATGCAACGTGTCAGCGCCTGAGATGACAATGATGCTTT TCAATTTGGCTGGTACTCAAGTGTATCATGGTTGCTTACAGTCGTCACATGTGTTTGCAAACAATGTTTCAAATATGGGGACTACAGTACATGTTGAAGT TGGTGAATTAAATCTCCGTTCGGCTGATGAATATCAAGAATCCTTGAAGGAAAGCGTTTTTGGTGTGGAATCAAATTCGGCCTCCATTATTCACATAAAA AAAGTTAGTTTGGATTGGGGCAAAAAGGACGTCAAATCCTCTCCAGAAGATGGTCCTAGGTGTATGCTAGGTTTATCAATTGATGTGACTGGCATGGGAG TTTATCTAACTTTCAAACGTGTAGAATCATTCATATCAACAGTGATACCCTTTCAAGCTCTATTGAAAAAACTATCTGCTTCAAAGAAAAAATCAACTCA GAGCCAGGGGCGTTTATCAAAAACTTCAGGGAAAGGAACTAAAATTTTGAAATGCAATCTTGAACTGTGTTCTGTATATGTATTGGGGGAGACAGGACTG GAAAACACAGATGTTGCAGATCCCAAGCGAGTTAATTATGGTTCACAGGGTGGTAGAGTTATAATAGATTTGTCAGCAGATGGTACCCCGCGCACTGCAA GCATAGTATCCACTGTCTCTAATGAATACCAGAAGTTGAAGTACTCTATCTCTCTTGAACTCTGCCATTTTAAGTTGTGTGTGAACAAGGAGAAACAGTC CACTCAGATGGAACTAGAAAGGGCCAGATCTGTCTATCAGGAATATATGGAAGAAAGTAGGCCTGTAACAAAGGTGGATTTATTTGATATTCAAAATGCT AAGTTTGTCCAGCGCTCAGGTGGTCGTGGAGAAAATGCTGCCTGCTCTCTTTTCAGTTCCACTGACATTAATGTGAGGTGGGAGCCTGATGTACATCTAT CACTAATTGAACTTGTCCTCCAGCTGAAGCTAGCGGTACACAGTAAGAAGCTTGAGGAGTGTGGTAATGAACAGATGGGAGATCTGTCTAATATGAGAGA TGCTAATAGGAAAAACGAAGCTACTGTGGAATCAGGGCATCTGGAAAAGAAGAAAAAGAAAGCATCTATTTTTGCTATTGATGTGGAAATGTTAACCTTG TCGGCTGAACTCGGAGATGGAGTTGATGCTATGGTTCAGGTGCAGTCAATTTTCTCTGAGAATGCTTCTATAGGATTGCTCTTCGAAGGACTCACGTTTA GTTTTAATGGAGCCAGAATCTTCAAGAGTAGTCGGATGCAAATTTCACGAATTCCTAGTAAATCTACTTGTGCATCGGATGCAAAGGGACCTGTAGCGAC TACATGGGATTGGGTAATTCAAGGTCTTAATGTCCACATTTGCTTGCCATACAGATTGGAATTGCGTGCTATTGATGATGCTCTTGAGGACATGTTGCGA GCTTTGAAGCTCATTATTGCTGCTAAGACTAATTTGATTTTTCCTGTGAAGAAAGAGACTTCTAAGGTTAAAAAACCCAGTTCTGTAAAATTTGGATGCG TAAAGTTTTTCATACGCAAATTAGCTTTTGATATTGAAGAGGAACCAATCCAGGGATGGCTTGATGAACACTATCAGCTGCTGAAGAAGGAAGCTGGTGA GTTGGTTGTCAGGTTGAACTTTCTAGATGAATTTATATCAAAGGCCAATCAAGGTACAAAATCTACTGATGACACCAATAATTCTTCTCAAGAAAGGAAG GTTATTTTTAATGATGTTGAGGTTGATATAAGTAATTCTTCAACTATTGAATCCATGAGAGAAGAAATTTATAGACGTTCATTCCGGTCATATTACCAGG CATGCCAGAACCTAGTGTTATGTGAAGGGTCAGGTGCTTGTAAAGATGGTTTTCAAGCTGGTTTCAAACCTAGTGCTTCAAGGTCTTCTGTTCTTTCAGT ATATGCATTAGACTTAGATGTAACCTTGACAAAAATTGACGGTGGAGATGATGGGATGATTGAAGTTATTAAGAAGCTTGATCCTGTCTGTCTTGAAAAT GATATACCATTTTCCCGACTGTACGGGTCAAACATTCTCTTAAATACAAGTTCTCTTGTGATCCAGCTTCGGGATTACACATTTCCTCTTTTATCTGCAA GTTCTGGTAAATGTGAAGGTCGTATTGTGTTGGCTCAGCAGGCAACTAGTTTTCAACCTCAAATGCGCCAAGATGTCTATGTTGGGAGATGGAGAAAGGT GGACATGCTTCGATCAGCTAGCGGTACCACTCCTCCAATGAAAACATACTCAGATTTGCCATTACATTTTCAGAAAGGCGAAGTGTCATTTGGGGTGGGT TATGAACCAGTTTTTGCTGATATCAGTTATGCCTTCACTGTGGTGCTACGTAGGGCTAATCTAAGTGTTAAGAAACCTGGCCTACTTATTCTTCCACCGA AAAATGAGCGGAGTTTGCCATGGTGGGATGACATGAGAAATTACATCCATGGAAAAATTTCCTTATTATTTTCTGAAACTAGATGGTATATATTGGCAAG TACTGATCCTTATGAGCAGCTTGATAAACTTCAAATCACGAGTAGTTCTATGGAAATTCACCAGTCAGATGGCCGTGTTATACTTTCTTCCAAAGATTTC AAGATTTTCTTGAGTAGTTTGGAGAGTATGGCAAATAAATGTGGTTCCAAAATTCCAACAGGTTTTTCTAGTGCATTTCTGGAAGTCCCAGAATTTACTG TCGATGTTACAATGGACTGGGATAGTGACTCTGGCAATCCATTGAATCATTTTTTATTTGCACTTCCAATTGAGGGGAAACCACGTGAGAAAATATTTGA TCCCTTCAGATCCACTTCTCTGTCCCTTCGATGGAACATATCTCTTAGTTCCTTTCTTCCTTCATTTGAAAAACAGTCCCCGTCCTTCATTGCAAGAGAT AGCATTGAAGGGGATGCTACTGCACAGCATTCTACTCGCATTTCTCATGATGTTTCATCTGCTTCCCCTACAGTGAAACTTGGTGCTCATGATCTAGCAT GGATTGTAAAATTCTCGACCTTGAACTACCTTCCTCCACATAAATTGCGCTTTTTCTCCCGCTGGCCTCGTTTTGGAGTTCCACGAATTGTCAGATCAGG CAATCTTTCCCTAGATAAAGTGATGACCGAATTTATGATCCGTATAGATTCGACACCAACCTGTATAAAGAATATGCCCTTACATGATGATGATCCAGCA AAAGGACTGACATTCATGATGGCAAAGCTGAAGTTTGAATTATGTTTTGGCAGGGGAAAGCAAAAGTTTACTTTTGAAAGCAAGCGTGACCTTCTTGATC TTGTATACCTAGGTATTGACCTTCACACGCCCAAGGTTTTCTTAAATAAAGAGGACTGCACTAGTGTTGCTAAATTAGTTGGCATGACACCGAAACTCTC ACAACCTGTATCTGAAGACAAAATCATCCCTGAAAAAGGTTCCATAACACAGAAAAGTCGTGATGATGGGTTTCTGTTATCCTGTGATTACTTTACTATA AGAAGACAGTCCCCCAAGGCTGATCCTGCTACGTTATTAGCCTGGCAAGAAGCAGGAAGACGAAATGTTGAGATGACCTGTGCGCGGTCAGAGTTTGGAA ATAAGAGCGAAGCTGATGAGAATATGCAGTCTGACCCAAGTGATGATGATGGGTACAATGTGGTAATAGCTGACAATTGCCAGCGTGTGTTTGTCTATGG TCTCAAGCTTTTGTGGTCTATTGAAAACAGAGATGGTATTTGTTCCTGGATTCTTGGTCTGTCCAAAGCCGCCGCACCTCCCAAGCCTTCCCCTTCCCGG CAGTATGCACAGAGAAAATTAGTTGAGGAAAATAAACAGCATGATGGAGTTGAAACCCATCAAGATGATGCCACTGAAGTGACTCAAGATGATGGAGCTG AAACCCATCAAGATGATAAAGCTGAAACCCATGAAGATGATGGAGCTAAAACCCATCAAGATGGTGGAGCTGAAATCAATCAAGATGGCGGAGCTGAAAT CAATCAAGATAGTGGACCTGAAATCCACCAAGATGATGTTTCTAAGCGCCCTCTCACTGGCAACAGCTCAGATTCTCCCCCTTCTCAGCCTGTCGGAACT TCTGGATCATTTTCATCCCCACCATGTTTGGTTAAGGCAGATAACTCACCACCTGATAAAAATGATAATACAGATGATTTGATGGAGGGGACTCGACACT TCATGGTGAATGTTATTGAACCACAGTTTAATCTTCACTCTGAAGATGCAAATGGTCGGTTTTTGCTTGCTGCTGCAAGTGGACGTGCTTTAGCCCAGTC GTTTCATTCAGTTCTTCGTGTTGGTTATGAGATGATTGAACAAGCAGTTGGCACTAAAGATGTACATAGTGGTGGATACGAACCTGAAATTGCATGGAAA AGAATGGAGTTGTCTGTTATGCTGGAGCATGTTCAGGCCCATGTTGCACCGACTGATGTTGATCCTGGGGCTGGAGTGCAGTGGCTTCCCAAAATTCGCA GAGGCTCTCCAAAAGTAATGCGTACTGGTGCTCTTCTTGAGAGAGTTTTTATGCCATGTGATATGTACTTTCGGTACACAAGGCACAAAGGGGGTACTCC AGAACTGAAGGTGAAGCCCTTGAAGGAGCTCACATTCAATTCTCATAATATAACGGCAACAATGACATCTCGTCAGTTTCAGGTCATGCTGGATGTTTTG AGCAATCTTCTCTTTGCACGCCTTCCAAAGGCTCGAAAAAATAGCCTGTCACTTTCTGTTGAAGATGAGGAAGTCGAAGAGGAAGCAGATGAGGTGGTTC CTGATGGTGTTGAAGAGGTGGAAATTGCAAAAATCAACCTCGAAAAGAAAGAGAGGAATCAAAAGCTGATTCTTAATGATATAATAAAATTATCTCTTCG GAATGACACTTCTGGAGATATATTTCCAGAAAAGGAAGATGACTTGTGGATGATATTTGGTGGAAGAGCCCTTCTGGTCCAAGGACTAAAGAGAGAACTT GTAAGTGCAAAAATATCTAAGAAGGAAGCATATGCAGCATTAAGGGTGGAAATGCATAAAGCTGCACAGCAACGGCTAATGGAGAAAGAGAAGAACAAAA GTCCTTCCTATGCTATGCGCATATCATTGCAAATTAACAAAGTTGTTTGGAGCATGCTTCTTGATGGTAAATCGTTTGCTGAAGCAGAGATTAATGACAT GATCTACGACTTCGACCGAGATTACAAGGATGTAGGCATTTCTCAGTTTACAACAAAATATCTTGTTTTCAAGAACTGCCTGCCTAACGCCAAGTCTGAT ACAATTTTGTCAGCATGGAATCCCCCACCTGAATGGGGAAAGTATGTAATATTTTCTGGTCTTTTCTTGAACTTATTGGTGCTTCCAAGTTGATTTTCTG GTATTTATTGCTTTGCTGTCATTGTCTTAATTGTTGGAGCTAGGTTATATGTTGATTAGTTTTTAAGTCCGAGTTGATCATCACCCCCCCCCCCCTAGGT TTCCACAATACTCTCAGCCACTCTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_187360; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_297431
| Blastp | Protein SABRE from Arabidopsis with 62.15% of identity |
|---|---|
| Blastx | Protein SABRE from Arabidopsis with 61.82% of identity |
| Eggnog | UPF0378 protein(ENOG410XSYR) |
| Kegg | Link to kegg annotations (AT1G58250) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460715.1) |
| Pfam | RNA pol II promoter Fmp27 protein domain (PF10347.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |