| Id Trinity | TRINITY_DN51754_c0_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_297435 |
| Sequence | TTGCTGCTATAGAAAGGTCATCCACCCTTTTTATCTGTGAAAAGTTGTCCGTCTCATGTGAATTTGGTCATGATAGGTATTTTTTATTCTCTCTAAATTT CTTATATTTTAATATTGCACTTGTTGGAATGATGGTTAGAGAAGTGGAGGTAGACTGTTTGCAAGATGATCTAAGCTGAGGCAATGGGAGTTTTCAAGGG AGTAACTTCAACTATCAGCGGGATTCCGGGGAGTGGGTATAATTATCAAGGACGTGGACATTTCTAGCGGAGAGGTCACTGTGAGCTTGAATGATGGGTT GTTTTTGAAAAGCAAAAGTTCATCAGAATCTTCTTCTGGCTCCGGCAGAATTTTAGAGTCCAGTGCTGATTCTGTGAGCACAAAAAAGACATCCAAGCAG CAGCAATCACTTGCAGCCTTCTCTAAGTACAGTTCTATGTTTCCTGAAAAGGTCAGCTTCAATCTACCAAAGTTGGATGTGAGTTTTGTGCATCGTGAAC ATGGTCTTTCCATTGAAAATAACATCATGGGCATCCAATTGAAAAGCACCAAATCACGATCCACTGAGGATGTTGGGGAGAGTACACGCCTTGATTTTCA ACTGGAGTTTAGTGAAATTCATCTTATTAGAGAAGCAGGTTCTTCCATCCTAGAGATATTGAAGTTGGATTGGGTTTCTTTTGTGTATATTCCAGTACAC CCAATCTCACCTGTTAGAGCTGAAACTGAAATCAAGCTCGGAGGTACTCAGTGCAACATCATAATGAGCAGGTTAAAGCCTTGGTTGCTCCTCCATTTGT CTAAGAAGAAAAAATTGGTACTTCGTGAAGAAGCTTCTGTTGTTGTAAAGCCCCAATCAACTGATAGCAAGACCATCATGTGGACATGCAATGTCTCAGC TCCTGAGATGACGATAGTGCTTTTTAATATGGTTGGTTCTCCAGTATATCATGGCTGCTCACAATCATCACACCTGTTTGCAAACAACATTTCAAATATG GGGACTACAGTACACGTTGAACTTGGCGAGTTAAATCTCTACTTGGCTGATGAGTATCAAGAATGCTTGAAAGAAAGTGTTTTTGGTGTGGAATCAAATT CTGGCTCCATAATGCACATTGCAAAGGTTAGTTTGGATTGGGGGAAGAAGGATGTGGAGTCCTCTGAAGAAGACGGTCCTAGGTGTAGGCTAGGTTTATC AGTTGATGTGACTGGCATGGGAGTGTATCTGACTTCCAAGCGTGTAGAATCACTCATATCAACAGCCATATCATTTCAAGCTGTATTGAAAAGCTTATCT GCTTCAAAGAAAAAACTGACTCAGAGCCAAGGGCGTTCAACAAAATCTTCAGGGAAAGGAACCCAGTTATTGAAATTAAATCTTGAAAGGTGTTCAGTAT ATGTATGGGGTGAGACAGGCTTGGAAAATACAGTTGTCCCAGATCCCAAACGAGTTAATTATGGTTCACAGGGTGGTAAAGTTATAATAAATGTGTCAGC AAATGGTACCCCGCGCAATGCAGATATAAAATCCTCTCTGTCTGATGAGTACCGGAAGTTGAAGTACTCTGTCTCTCTCGAAATCTTTCAACTTAATTTG TGTGTGAATAAAGAGAAACGGTCCACACAGGTAGAGCTTGAGAGAGCCAAATCTATCTATCAGGAATATATTGAGGAAAATAAGCCGGTAACAAAGGTGG CATTGTTTGATATGCAAAATGCTAAATTTGTACGGCGTTCAGCTGGCCTTAAAGAGATTGCTGTTTGTTCTCTTTTCAGTGCTACTGATATTACAGTAAG GTGGGAGCCTGATGTACATCTATCACTAGTTGAACTTGTTCTCCAGTTGAAGTTACTTGTACACAATTGCAAGATTCAGGAGCGCGGTAATGAACACATG GAAGACATGTCTCATGTGCAAGATGGTAATGAGAAAAATGAAGCTACTGTTGAATCAGGGCATCTTGAAAAGCAGAAGAAGAAAGAATCTATTATTGCTG TTGATGTGGAAATGTTAAGTATATCAGCCGAGCTGGGAGATGGAGTTGATTCTATGGTTCAGGTGCAGTCAATTTTCTCTGAGAATGCTCGTATAGGAGT TCTCCTTGAAGGACTTATATTTAGTTTCAATGGGGCCAGAATCTTGAAAAGTAGCAGGATGCAAATTTCACGAATTCCTAGTGTCTCTGCTGTTGCATCT GATGCAAAAGGATATGTAGGCACAATATGGGACTGGGTAATCCAAGGTCTTGATGTTCACATTTGCATGCCATACAGATTGCAATTGCGTGCCATCGATG ATGTCATTGAAGATATGTTACGAGGTTTGAAGCTCATAATTGCTGCAAAGACTAATCTTATTTTTCCTGTGAAGAAAGAGAGCTCTAAAGTTAAAAAGGC TAGTTCAGTACAATTTGGATGCATAAAGTTTTGCATACGCAAGTTGACTGCTGACATTGAAGAGGAACCAATCCAGGGATGGCTTGATGAACACTATCAG CTGCTGAAAAAGGAGGCAAGTGAGTTAGCTGTCCGGTTGAACTTTCTAGATGAATTTGTTTCAAAGGCCAAACAAGGACCGAAATCTAGTGACACCAATA ATTCTTCTCAAGAAAGAAAGAAATATTTTAATGATGTTGAGGTTGATGTAAATGATTCTGTTACTACTGAATCCATGAGAGATGAAATTTATAAACGATC ATTCCGATCATATTACCAGGCATGCCAGAATCTAGTGTTATCTGAAGGGTCAGGTGCTTGTGGAAAAGGTTTCCAAGCTGGTTTCAGACCTAGTACTTCA AGGACTTCTCTTCTTTCAATATCTGCATCAGACTTAGATGTAAGCTTGAAAAAAATTGATGGTGGAGAGGCCGGGATGATTGAGTTTCTGAAGAAGCTTG ATCCTGTCTGTCTTGAAAATGATATACCATTTTCCCGCCTGTATGGGGCAAATATTATCTTAAATATAGGTTCTCTTGTAGTCAGACTTCGGGATTACAC ATTTCCTCTTCTCTCTGGAAACTATGGTAAATGTGAAGGTCATCTTGTGTTGGCTCAACAGGCAACTAGCTTTCAACCTCAAATATATCAAGATGTTTAT GTTGGGAGGTGGAGAAAGGTTCGCATGCTTCGATCAGCTAGTGGTACTACTCCACCAATAAAGACATACTCAGATTTGCCAATTCATTTCCAGAAAGGTG AGGTGTCATTTGGGGTAGGTTATGAACCAGCTTTTGCGGATGTTAGTTATGCTTTCACTGTGGCACTTCGGAGGGCTAATCTAAGTGTTAGGCATCCTGG CCCACTCATTGTGCCACCAAAAAAAGAGCGGAGTTTGCCATGGTGGGATGACATGAGAAATTACATACATGGAAAAATTTCATTACACTTTTCGGAATCA AGGTGGAATATTTTGGCAACTACTGATCCTTATGAAAAGGTTGACAAACTTCAACTTGTGAGTAGCTCTATGGAACTTCACCAGTCTGATGGTCGTGTTT TTGTTACTGCCAAAGATTTTAAGATTTTATTGAGTAGTTTGGAGAGTTTGGCAAACAAGCGTGGTTTTAAAATTCCAGCAGGTGTCTCTGGTGCATTTCT AGAAGCCCCAATCTTTACTCTTGAAGTTACAATGGACTGGGATTGTGAATCTGGAGATCCCATGAATCATTATTTATTTGCACTTCCAGTTGAGGGCAAA CCTCGTGAAAAAGTATTTGATCCCTTTAGATCCACTAATCTTTCCCTTCGATGGAACTTCTCTCTTAGACCCTTTCCTCTTTCATCAGAAAAACAGACCC CATCTTCCATTGCTAGAGATAATATTGAAGGAGATGCTACTGTATATGATCCTCCTTGCATATCCCAAAATGTTTCACATGCTTCCCCAACATTTAACTT TGGTGCTCATGATCTTGCATGGATTCTAAGATTCTGGAACTTGAATTACATTCCTCCACATAAACTGCGCAGCTTCTCTCGCTGGCCTCGCTTTGGAATT CCAAGAGTTGCCAGGTCAGGCAATCTCTCACTAGACAAAGTGATGACCGAATTTATGATCCGTATAGATGCGACACCAGCCTGTATAAAGAACATGCCTT TAGATGATGATGATCCAGCCAAAGGACTGACTTTCACAATGACAAAACTGAAGTATGAACTATGTTATAGTAGGGGTAAGCAAAAGTATACTTTTGAAAG CAAGCGTGACATTCTTGATCTTGCTTACCAAGGTCTTGACCTTCATATGCCCAACGCTTTCCTGAATAAACAAGAGTGCGCTACTGTTGCCAAAGTAGTT AACATGATACGAAAAAGTTCACAGTCTGTATCCATAGACAAAGTCCCCACTGAAAAACGTTACATGTCAGAGAAAAATCGTGATGATGGATTTCTGCTGT CCTCTGATTACTTCACTATCAGAAAACAATCCCCAAAAGCTGATCCTGCTAGGTTACTAGCATGGCAAGAAGCGGGAAGAAGAAATGTTGAGATGACGTA CGTGCGGTCTGAGTTTGAAAATGGGAGTGAAACTGATGAACATTTGCGTTCTGACCCAAGTGATGATGATGGTTACAATGTGGTAATAGCTGACAATTGC CAGCGTGTGTTTGTCTATGGTCTCAAGCTTCTGTGGACTATTGAAAACCGAGATGCTGTTTGGGCCTGGGTTGGTGCTCTATCCAAAGCCTTTGAGGCTC CCAAGCCTTCTCCTTCTCGGCAGTATGCACAGAGAAAATTACTTGAGGAAAGCAAACAGTGTGATGGAGCTGAAAAAAATCAGGATGATGGCTCAAATTG CCCTCCCACTGGTCACATTTCCAATTCTCCCTCATCTCAGACTGTAGGTACTTCTGGATCACATTCATCTCCACCAAATTCAGTTAAGGTGGACTACTTG CCATCTGCGAGAAACGGGAACACAGATGATTCGGATGGGACTCGACACTTCATGGTGAATGTTATTGAGCCTCAGTTTAATCTTCACTCAGAGGATGCGA GTGGTAGATTTTTGCTTGCTGCTGTAAGTGGCCGTGTTCTAGCCCGGTCATTTCATTCAGTCCTTCAGGTTGGTTTTGAGATGATTGAGCAGGCACTTGG TACTAAAGATGTACATATTAATGAATACCAACCTGAAATGACATGGAAAAAAATGGAGTTCTCTGTTATGTTGGAGCATGTACAGGCTCATGTTGCCCCA ACAGATGTTGATCCAGGAGCTGGATTGCAGTGGCTCCCGAAAATTCTGAGAAGCTCTCCAAAAGTAATGCGTACAGGTGCTCTTCTTGAGAGAGTTTTTA TGCCTTGTGATATGTATTTTCGGTATACAAGGCACAAAGGGGGCACTCCAGGACTGAAGGTGAAGCCCTTGAAGGAGCTCACATTTAATTCACATAATAT AACAGCAACAATGACATCTCGCCAGTTCCAGGTCATGCTAGATGTGTTGACCAATCTTCTATTTGCACGGCTTCCGAAGCCTCGAAAAAGTAGCCTGTCC TTTTCTGCCGAAGATGATGAAGATATTGAAGAGGAAGCAGATGAGGTAGTTCCTGATGGTGTTGAAGAGGTGGAACTTGCAAAAATCAACCTTGAACAAA AAGAGAGGGAACAGAAGTTGCTTCTTGATGATATTCGAAAGTTGTCTCTTTGGTGTGACAATTCTGGAGATCTGCATCCGGAAAAGGAAAATGATGTATG GATGATAGCTGGTGGGAGATCAATGCTGGTCCAAGGACTGAAAAGAGAACTTGTAAGTGCCCAAAAATCTAGAAAGGCAGCATCTGCATCATTAAGGCTG GCTCTACAAAAAGCTGCACATCTACGGCTAATGGAGAAGGAGAAGAACAAAAGCCCCTCCTATGCTATGCGCATATCATTGCAAATTAATAAAGTGGTTT GGAGTATGCTTGTTGATGGTAAATCATTCGCTGAAGCTGAAATTAATGACATGATTTATGACTTTGACCGAGATTACAAGGATGTGGGTGTTGCTCAGTT TACAACAAAATATTTTGTTGTCAGAAACTGCCTTCCTAATGCCAAGTCTGACATGCTCTTGTCAGCATGGAATCCTCCTCCTGAATGGGGAAAAAAAGTG ATGCTTCGAGTAGATGCAAAACAGGGAGCTCCAAAGGATGGAAATTCTCCCCTTGAACTTTTCCAGGTAGAGATTTATCCCCTTAAGATCCATTTAACAG AGACGATGTACAGAATGATGTGGGAGTATTTCTTCCCAGAAGAAGAACAAGATTCCCAACGCCGACAGGAGGTTTGGAAGGTTTCAACCACTGCTGGTGC AAGGCGTGTAAAGAAAGGGTCATCAATCCATGAAGCTCCTGCTTCAACCAGTCATTCAACAAAAGAGTCTGAGGCCTCATCCAAATCTGGTATCTCTGCA ATGCTATTTCCTGCAACAAGTCAACCTTCTGTCCATGTTGATTCGGCTCAAGCATCCAAAACACAAAGTGTCAAGGCAAACCCTGGTACTAGTACAACCC CTGAGTTGAGAAGGACATCGTCTTTTGACAGAAGTTGGGAAGAGACTGTGGCAGAATCTGTAGCTAATGAACTTGTCTTACAAAGTTTCTCTTCCTCTAA AAATGACCAATTTGATTCTAATGAGCAACAAGATGAAGCCTCTAAGAATAAATCAAAAGATTCCAAAGGTGTCAAAGCTGGTCGCTCATCTCATGAAGAA AAAAAGGTGGCTAAGTCACATGAAGAGAAGAGATCTAGGCCACGAAAAATGATGGAGTTTTACAACATCAAAATTAGCCAGGTTGAGTTATTGGTAACAT ATGAAGGGCAAAGATTTGTCGTAAATGATCTGAAATTACTGATGGATCAATTTCACCGAGTTGAGTTTACTGGGACTTGGCGAAGACTCTTCTCACGAGT TAAGAAGCACATCATCTGGGGAGTCCTAAAGTCTGTGACTGGAATGCAGGGAAAGAAATTTAAAGACAAAGGACAAAGTCAGCCCAGTGGATCCAGTGTT CCTGAAATTGACCTTAATTTTAGTGACAATGAAGGCCAGGCAGGAAAATCTGATCAGTATCCAGCATCTTGGCCTAAGCGGCCAGGTGATGGTGCAGGTG ATGGATTTGTAACATCCATTAGAGGACTTTTTAATACCCAACGCCGCAAGGCAAAGGCATTTGTTCTCCGAACTATGAGAGGTGAAGCGGAGAATGATTT TCAAGGTGATTGGAGTGAAAGTGATGTCGAGTTTTCTCCTTTTGCTAGGCAGCTCACGATTACGAAAGCTAAAAAGCTTATTAGGCGGCACACTAAGAAA TTCCGCTCCAGAGGACATAAAGGCTCATCCTCTCAACAAAGAGAATCGCTACCATCATCTCCGAGAGAGAGAATTTCATTTGACAGTGATTCTTCAAGTG GGTCCTCGCCATATGAAGATTTTCATGAATAGAAATGTTTATAGTTATGAATTTCGTAATTTTCAGCTCATCACGATACACTTTTTCGGATCTTAAGTTA CTCTAAAGGATGAAAAAACGTGTCGGCTGACCTCTAAATCAAGAGGTACCTCAGTTGTAGACTTGTGAAAAGGCATCTGGAGAAGAATGTGCTGTCTGGA GAGGAAGATAAACTGAGGGATTCAGTGCAATGCATGGTTGATGTTGCTTGCTTGCTATTCAATGTGTATATTCCCAGGTAATCTGAGTAATCAGTGATAA AGAGCCTTATTTTGTTCTATGTTCCAACATTTTATATTATCTGTCAACCACATAGATGTAACATTTTCTATTACCTATCAAACCACACAGATCTAACATT TTCTATTACCTATCAAAACCACACAGATGTAACATTTTCTATTCCTTTACAACTTCTGTCACCAGTGATGAAAGAGCCTTACGTTAATCTCCTCAAAACT CATTCCGGTTGTATATTTTTGTAGCTTTTGTTCAATGTACATTTTTGGGTTCCTTAATTTATTGGAAAATATGAACCTACAAGGTTGCCATGATTATGTA CAGACATTTCGATTATATTTTGGAAAATAGAATAAAAGCAATATCCTCTCCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_187360; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_297435
| Blastp | Protein SABRE from Arabidopsis with 69.88% of identity |
|---|---|
| Blastx | Protein SABRE from Arabidopsis with 68.65% of identity |
| Eggnog | UPF0378 protein(ENOG410XSYR) |
| Kegg | Link to kegg annotations (AT1G58250) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416692.1) |
| Pfam | RNA pol II promoter Fmp27 protein domain (PF10347.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |