| Id Trinity | TRINITY_DN51758_c3_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_296736 |
| Sequence | CAACATGTTAGAGTTCATGCAGTCGATGCTGTCATGGCTTGCCGTGACATTGAAAATACTTTACAAGCTCTCACAGGAGCAAGTTTGGGAGAAGGAAGTG GTGCAACAATGTCAGATGATGAAGATGATATGCGAATGGATTTGTCATTAGATCAATCGAGTGGTGAAGGGCATGACATGATGGGATTTGGTCCCTTACT TCCTACTGAATCTGAAAGGTCACTCATGGAAAGAGTTCGTCAAGAACTCAAGATTGAGCTTAAGCAGGGTTTTAAGTCCAGAATTGAAGATGTTAGAGAA GAAATATTAAGGAAAAGAAGAGCTGGGAAATTACCTGGTGACACAACTTCGGTGTTAAAGAATTGGTGGCAGCAACATGCCAAGTGGCCCTACCCAACTG AAGATGACAAGGTAAAACTTGTAGAGGAGACAGGGTTGCAGTTGAAGCAAATCAATAATTGGTTCATCAACCAAAGGAAACGTAACTGGCATAGCAACTC TCAATCTGTTACTTCTTTGAAGTCCAAGCGCAAGAGGTAGACATATATATAGTTTTCCTAACTATGTGGGAGTGTGGATCATGTAAAAAACTTTACACTT AGGATACAAATATTAAATTCTATAAATACATGAATGTCCTACTTTATCCTTATTGCTGATTAAAGTCTATAGTAGATGGTTTAGTGATTCACTCTATATA TAATGCATGTAATCTGCAAAATAGATGGGTGTAAATTTGTGGAATTTAAAGTTTTTTGTGTTATTAGCTGTGCTTGTTTCCATTTCTTTGCTTTTAACTG GACATCTTTGTAAATGGTTTGTTACGTTTCTGACCAGCTGAAGAATATTATTATCATTATACAATTTGATTTGAAAGATTACAGGTTCTTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_187410; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_296736
| Blastp | Homeobox protein HD1 from Brassica with 84.21% of identity |
|---|---|
| Blastx | Homeobox protein HD1 from Brassica with 85.08% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (106394496) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424063.1) |
| Pfam | Homeobox KN domain (PF05920.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |