| Id Trinity | TRINITY_DN51761_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_296234 |
| Sequence | AAGTAACCCGCGGGTGAGATAGAGAGTGGGAAAAGAGAGTGTGTTGGTGCTATTTGAATCACCGCTTTTGGATCAGCAAAACCCTTTCTGCCTTAAAACC CAAACCCTTAGCGGCTGCAAGAACCGTTTCTCTTTCTCTCTCTCTGGTTTTGATTCTCTCTCCAATTAGGGTTTCGATTTGGGGCTAAAACCCTTCGATT CAGAGTTGCTCTATTCGGATTTGGATTTTTGAGGTTGTTCCATTTTTCTTCTTGAAGAGGAGAACAAGATCTCGTTATTGATTTCAACATGGCTACTGTT GCTAGTCCCGCTGATCGTATCCTTTGTTTGATTTTGCGCTTCTGCTGTTAAATTTCAGCTTTGATTTATTTGTTTCTTGATTTCTTTTAATAAACCTCTG ATTGGATCGATATGATTTTTGTTTTGTTTTGATATTTGGTTTAGGGTTGGCTCTATTTTTGTTGTTGTTAATTTCGGGATTTAAGATATCCCCGTTTTGA TATTCTTTTATTTTTTTGTTTGTATATTAAGATTGTATTTTTTATTTTTGTTTGGGATTGACTTTCTGATTAGAAATTCACTGTGAATTAATTCGTTTGA GTTTTTGGGTATTTGAGGTTATTTGTATATGGTCATTTTCTGGATTTTTTGTGTTCAGGTTTATGCTTTCTGAAAACTTCGATTTTGTGAGAGTTGTGTT CCTTAATTCTCTTGTTTCTACAGAAGCAACTGATTTACAACAAACGTTGTCATTAGAAACCAAGCCCAAGCCTCTGGAAATTCCTGAGCCTACCGAGAAG GCCTCTGGCAATCAATATGGAACAGTTGATTCTGTAAATGCTCTGAATGGCCAGATCCCTCCTTATGATCGGTCTGTAACACCTCAGTCACAAGAATTTA CAGATCCCTCTCTGTGTTACCTTCACCATGGTGGTTACCCGTCTCCTGCCTATTATTATGGTGGCTACGATGGGACTGGCAATGAGTGGGAAGATTATTC TAGACATTTGAATCATGAAGGAATTGATATGTCTTCTGGAGTTTATGGAGATAGTGGGTCTCTGTTGTATCACCATGGGTATGGATATGCACCCTATGCC CCTTATTCACCAGCAGGGTCTCCAGTTCCAACCATCGGAAATGATGGTCAGCTGTATGGGCCTCAACACTATCAGTATCCTCCATATTTCCCACCGTTGA CCCCAACTAGTGGTGGGTCATTTGCACCAACTGCAACTATTCCTCCGCAGGGCGGGATTACCACCTCTGTAGCTGTTGATCAGAAGCCTCTCCCCGTAGA AACAGCTAATGGAAACTCAAATGGTGCCACAAATGGCAGAAATGCCAAAGGTAATAATGGTTCTGCCCCTGTCAAGCCGGCCTATCAAAACTCATTTAGT TCCAATGCTTCATATGAAAGGGGTGCTGTGCCAAGTCGTGGTCCTAATTCGGGTTATCAGGATCCTAGATTTGGTTTTGATGGAGTACATTCACCTGTCA CTTGGTTAGATGCCCCACTATTTTCAGATGGGCAACAAAGACCAGCAAATAGCACAATAATTAGCTCCTCGGTATCAGGTGGCAATAACAGTACTGCATC AAGGAACCAGACCTTCCGCCCTAATTCTCAATTTATGGGTTTACAACACCCAAGACCAATTCCTGCCCTGGGAGCAAACCCTGGCTTCATAAACAGGATG TATCCTAATAAGTTGTATGGTCAGTATGGGAACCCAATTAGATCGGGCATGGGTTATGGAGCACATGGATATGATTCTCGCACAAATGGACGGGCTTGGT TAGCTGTTGACAATAAATACAAAACTAGAGGACGTAGTGGTGGTTACTTTGGCTATGGCAATGATAACGTGGATGGTTTGAATGAACTGAACAGGGGACC TAGAGCCAAAGGCAATAAGAACCAAAAAGGGTTTACTCCAACTACTATTGCAGTCAAAGGGCAGAATTTGCCTGCAATTCTAAGCATTGGTGAGGAGAAA GATAAGACCATTTCCACTCCAGACCTCAATCAATATAACAAAGCTGAGTTTCCTGAAGAATACACTGATGCCAAATTTTTTATCATCAAGTCTTATAGCG AGGATGATATCCATAAAAGCATCAAGTATAATGTGTGGGCTAGTACACAAAATGGTAACAAGAAACTGGATGCTGCATATCAGGATGCCCAGCAGAAACC TGGTGGCAGCCCTGTGTTCCTGTTTTTCTCGGTTAATACTAGTGGACAATTTGTTGGTGTCGCCGAGATGATTGGTCCAGTTGATTTTAACAAGAGTCTT GAGTACTGGCAGCAAGACAAGTGGAATGGTTGCTTTCCTCTTAAATGGCACATTGTTAAGGATGTTCCTAACAATCTGTTGAGGCACATAACATTGGAAA ACAATGAGAATAAGCCGGTCACTAACAGCAGGGATACCCAAGAGGTATTGTTGGAGCCTGGTCTGAAGCTGATCAAAATTTTTAAAGAGTATACCAGCAA GACATGCATCTTAGATGATTTTGGGTTCTACGAGTCTCGACAGAAGACAATTTTGGAGAAAAAAGTGAAGCAACAACACCCGAAGCAGGTATGGGAGGGA AAGTCCACTGATGAGAAGACAGAGATAAATGGTGAACTTAAAGCTCAAAATCTGGGAGTGGCATCAGAATTGCTCAAAGACTTGACTCTAGCTAAGAAGG ATACTGATGACCACAAACTTTCTGAGAATGGATCTGTTGCTAAAACTGGAGATGCCCCAAAGGGTGCTAAGCCAGTTGTATCTGAGACCAAGATTGCAGC AAATGGTACTGCTAATGGTTACTAAGCCCTGTTCAGTGATGGCGGTGCCAATCTTGTATCAGTGGATTATATATTGCTCCTTAGAGAATGGAATACCTTA GCTATTGGCTCCGCCTCATTGAATCTGTCTGGCCTTCTCTTTCTCTGAAGATGATAGGGGGACTGGTGATGATAAAGATCTGTATATTTGAGATTGGCTG GGAGGAGGTAGTTCATAGAATGTTAGTACCAACACCCTTTTCTTTGGGTTTTGTTTTACAGTGGTTAGCTCCAAATAGGTTTTGTTTACTGCCCTAGGTT TTGGGTTTTTTTAGTTTTTCTGCTTAAAAGATCTGCTTACATATTGTTTTTTTCGTTTGGACTTCATCCTTTCGTTTTCCTTTATTTTCTTCCCGTCTAT TTCCTTTACTTGTTGGTGGTCGTTTCCTGTCTTGTAAATCTTGATCTACTTGGTTGTTACTTCCAACATAGGTAGATACAAGATGGGAAATAGTGAAAAA ATATACTGGCTTTTTATGTTTTTGGTCTCCCTAGTTTTTATTTATTGTATGATGATTGATTGAGCATATTGGAGAATGCATGTTTGGACAATCTATTATG TTGTAATAGGGTGTTTTCTGTCTATAAAGGCCACCGGTATGATTACTTCACGTCCTCTTGTCCTTATTTTCAACTTTATAGTTTTCTTCCCTGCAATGTT GAATGATGCTTATTTCTTATATATATATGTTAACAGATCTTCGTGTCTTTAAAGCAAGTTTAGTAGTTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_187425; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_296234
| Blastp | YTH domain-containing family protein 2 from Mus with 56.22% of identity |
|---|---|
| Blastx | YTH domain-containing family protein 2 from Macaca with 56.52% of identity |
| Eggnog | YTH domain family(ENOG410YABQ) |
| Kegg | Link to kegg annotations (213541) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444219.1) |
| Pfam | YT521-B-like domain (PF04146.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |