Id Trinity | TRINITY_DN51761_c0_g1_i13 |
---|---|
Name Transcript | Ll_transcript_296247 |
Sequence | CAAAAACTAAAACTAATGATAAAAAAACCAACACAACAGCAATCGAACACGTGTACAAATCCACCAATAGTAAGAGAGAAGTAGATGAGAGCGTGACCCG CGGGTGAGATAAAGAAGATAGAGAAAAGAGAGCGTGTTGGTGCTATTTGAATCACCGTTTGAGAATGAACAAAACCCTCTCTCCCTGAAAACCCAATCCC TTGGCGGCTGCGAGAACCTTTTTTTTCTCTCTCTCTCCTCTCTATTTATCTCTTTCTCGCTCCTATTAGGGTTTCGATTTGGGTCTAAAACCCTTTCGAT TTGTGGTTTTCGGATTTCGATTTTGGGCTCTGCTGTTTCTCTTATCTGAAGAATAAGATCTCGTGATTGATTTCAACATGACTACCGTTGCTACTGCCGC TGATCGTATCCTTATACACTGTTTGATTTGATTTTGCATATGTTTCGAAATTTATGTGTTTTGTTCTTTGTTTATTGATCTGTTTTCGTCAACGTATGGT TGGATGGAAATGATGTTGTTTCGTTTAGATCTTTGCTTTAGGGTTTACTTGGATGTTTTTACGGTTGATTTAGGGATTTTGCTATATGCGTCATGATTTT TTGGCTATGAATTTGAGTTTTTGATTTCGATTCATTTTCTGATTTTAAATAATATGCGAATTTCTCGTTTGAGATTTTGGGCATGTGGGGTTTACAGACT TTTGTGTTTGAAAGTTGAGGGGTTGGGAAGATTTTATGGATTTTTGTAGAAGCCTTTATACTTGCGCTGAAAATTTTGATTTTGTGGGAGTTTTGTGTTC CTTCACTCTTGTTTAACACAGAAGCAACTGATTTGCTGCAAACGTTGCCACTAGACTCTAAGCCCAAGCCTCTGGAAATTCCTGAGCCCACCAAGAAGCC CTCTGGCAACCAATACGGAACAGTTGATTCAGGAAATGCTCTGAATGGCCAGGTCGCACCCTATGATCGGGCCACAACACCTGTTATACAAGAATTTACG GATCCCAACTTGTGTTACCTTCCAAGTGGTTACCCGTCTACAGCCTATTATTATGGTGGCTACAATGGGACTGGTAACGAGTGGGAAGATTATTCAAGAT TTCTGAATCCTGAAGGAGTTGATATCACTTCTGGAATTTATGGGGATAATGGGTCAGTGGTATATCACCATGGATATGGATATGCACCATATGCCCCTTA TTCGCCAGCAGGGTCCCCAGTTCCAACCATTGGAAATGATGGGCAGCTGTATGGGCCTCAACACTATCAGTATCCTCCATATTTCCCACCGTTGACCCCA ACTAGTGGTGGGTCATTTGCACCAACTGCAACTATTCCTCCGCAGGGCGGGATTACCACCTCTGTAGCTGTTGATCAGAAGCCTCTCCCCGTAGAAACAG CTAATGGAAACTCAAATGGTGCCACAAATGGCAGAAATGCCAAAGGTAATAATGGTTCTGCCCCTGTCAAGCCGGCCTATCAAAACTCATTTAGTTCCAA TGCTTCATATGAAAGGGGTGCTGTGCCAAGTCGTGGTCCTAATTCGGGTTATCAGGATCCTAGATTTGGTTTTGATGGAGTACATTCACCTGTCACTTGG TTAGATGCCCCACTATTTTCAGATGGGCAACAAAGACCAGCAAATAGCACAATAATTAGCTCCTCGGTATCAGGTGGCAATAACAGTACTGCATCAAGGA ACCAGACCTTCCGCCCTAATTCTCAATTTATGGGCTTACAACATCCCAGACCAATTCCTGCACTGGGATCAGCCCCTGGTTACATAAATAGGATGTATTC AAACAAGTTATATAATCAGTATGGAAACACAGTGAGATCTAGTATTGGTTATGGAACACATGGATATGAATCTCGCACTAATGGACGAGGTTGGTTAGCT GTTGACAATAAATACAAAAGTAGGGGACGAAGTGGTGGGTACTTTGGCTATGGCAATGACAATACAGATGGTTTGAATGAACTGAACCGCGGACCTAGAG CCAAGAGCAATAAGAACCAAAAGGGTTTTGCTCCAACAATACTGGCAGTCAAAGGGCAGAACTTGCCTGCGGCTCTAAGCACAAGTGAGGAGAAAGATAA GACTATTTCTGTTCCAGACCTTGATCAGTATAACAATGTTGAGTTTCCTGAAGAATACACTGATGCCAAATTTTTTATCATCAAGTCTTACAGTGAGGAT GATGTCCACAAAAGCATAAAATATAATGTGTGGGCTAGTACACAAAATGGCAACAAGAAACTTGATGCTGCTTATCAGGAGGCCCAGCAGAAACCTGGCG GTTGCCCTGTATTCCTTTTTTTCTCGGTTAATACCAGTGGCCAATTTGTTGGTCTTGCGGAAATGATTGGTCCAGTTGATTTTAATAGCAGTGTCGAATA CTGGCAGCAAGATAAGTGGAATGGTTGCTTTCCTCTTAAGTGGCACATTGTTAAGGATGTTCCTAACAATTTATTGAGGCACATTACCTTAGAAAACAAT GAGAGCAAGCCAGTTACTAACAGTAGGGATACCCAAGAGGTATTGTTGGAGCCAGGTCTGAAGCTGATCAAAATTTTTAAGGAATTTAGCAGCAAGACAT GCATCTTGGATGACTTTGCGTTTTATGAGGCTCGCCAGAAGACAATTTTGGAGAAGAAAGCAAAGCAACAAGTCCCAAAGCAGGCATGGGAAGGGAAACC CACTGACGAAAAGGCAGAGTTAAATGAGGAAGTTAAAGCTCAAAACCCTGAAGTTGCCGCAGAATTGCTCAAGGACTTGACTCTATCTGAAAAGGATACT GATGACCACAAACTTTCTAAGAATGAATCTGATGCTAAAACTGGAGATGCCCCAAAGGGTGCTAAACCAGTTGTATCCGGGACCAAAATTGTAACAAATG TGGTTGCTAATGGTTCCTAAACTCTGTTCTATGATGGTGGTCCCAATTTTGTCAGTGGATATATTGCTCCTTAGGCAATTGAATACTGAGCAATTGGTTC CGCCATATTGAATCTGCCTGGCCTTCTCTCCTGTTTGAAGATGATAGATGGACCTGGTAATGATGAAGATCTGTTTGAGATTTGGCTAGGCAGAGTTAGA TCATAGAATGCTAGCACCAACCCCTTTTGGTTGGGTTTTGTTTACAATGGTTAGCTCCTAATAGGTTTTTCTCTCCTTCCTAGGATTCCTGTTCTTAGTT TTTCTGCTTAAAAATCCTTATATCTTGTTTTTTTATTTGGACTTCATCTGTCTTCCTTTGTTTCCTTTACTTTATTGGCTGTTTCCTGTCTTGTAAATCT ACTATGTTGTTTTAGACAGAAGTAGAAGCAAGGTAGGAAACAGTGAAGAAGATATACTGGTTTCAAGTTTTTGGTTTACCTAGTTTTTAAGCTTTATTTA TTTATTGTCTGATTGACTTGAGCGTACTGGAGAAAGAGTTTGGACAATCTATTATGTAATAGGGTGTTTTCTGGCTTATGAAGGTGCCCTTTTTGTTTCA TTTATATTATTAATATTTATTTCACCGTTTTTCTCTCCAGGGTTCATAATTTTGTAAACCTTTTCATAATGTAGGTTCTAGTATCTCAAGTTACTAAATA CTGTCTTTTGGAATTATCTTTTTTCATATTGTAGAAGTTTTATGTCAAATTTGTATCTTCTAAGTGGTTCTCTTGGATAAGATATTTTTCAATAAACAAC GTGGAATTTTAAATAGATAAGGGTGTTCCGTATGGTATCGTGGCTTGTTCATGTTTCAGTTGAAATAGTGTTTCCTTTGCATTCTTATGTTTGTTCTGAT GCAGGG BLAST |
Tissue | pods |
Gene name | LI_gene_187425; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_296247
Blastp | YTH domain-containing family protein 2 from Macaca with 51.27% of identity |
---|---|
Blastx | YTH domain-containing family protein 2 from Mus with 51.27% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444219.1) |
Pfam | YT521-B-like domain (PF04146.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |