Ll_transcript_296235

• Id Trinity: TRINITY_DN51761_c0_g1_i2
• Name Transcript: Ll_transcript_296235
• Sequence: CAAAAACTAAAACTAATGATAAAAAAACCAACACAACAGCAATCGAACACGTGTACAAATCCACCAATAGTAAGAGAGAAGTAGATGAGAGCGTGACCCG CGGGTGAGATAAAGAAGATAGAGAAAAGAGAGCGTGTTGGTGCTATTTGAATCACCGTTTGAGAATGAACAAAACCCTCTCTCCCTGAAAACCCAATCCC TTGGCGGCTGCGAGAACCTTTTTTTTCTCTCTCTCTCCTCTCTATTTATCTCTTTCTCGCTCCTATTAGGGTTTCGATTTGGGTCTAAAACCCTTTCGAT TTGTGGTTTTCGGATTTCGATTTTGGGCTCTGCTGTTTCTCTTATCTGAAGAATAAGATCTCGTGATTGATTTCAACATGACTACCGTTGCTACTGCCGC TGATCAAGCAACTGATTTGCTGCAAAACTTGACATTAGACACTAAGCCCAAGTCTCTGGAAATTCCTGAGCCAACCAAGAAGGTCTCTGGCAACCAACAT GGAACAGTTGATTCAGGAAATGCTCTGAATGGCCAGATCCCACCTTATGATCGGTCTCTAACACCTCTCTTACAAGATTTTATGGATCCTGCCATGTATT ACTTTCCAAGTGGATACCCATCTCCTGCCTATTATTATAGTGGTTATGATGGGACTGGTAATGAGTGGGAAGATTATTCTAGATTTATGAATCCTGAAGG AGTGGATGTGACTTCTGGACTTTATGGGGATAATGGATCTATGCTGTATCACCATGGATATGGATATGCACCCTATGCACCCTATTCTCCAGCTGGGTCT CCTGTTCCCACCATAGGAAATGATGGACAACTGTATGGGCCACAACACTATCAGTATCCTCAATATTTCCAGCCACTGACTCCAACTAGCGGTGGGTCAT TTGCACCAACTGCAACGGTTCCTCCTCCGGGGGAGATTACCTCATCTGTAGCAGCTGATCAGAAGCCTCTTCCTGTGGAAACAGCTAATGGAAATTCTAA TGGTGTCGCAAATAGTGGCAACACTAAAGGTCGTGGCCCTACTTCAGGTTATCAGGATCCTAGATTTGTTTTTGATGGAGTACACTCACCTATCCCTTGG TTAGATGCCCCACTATTTTCAGATGGGCAGCAAAGACCTGTAAGTAGCACAACAATTACATCCTCGGTTTCAGGTGGCATTAACAGCACTGCGTCGAGGA ACCAGAATTTCCGTCCTAATTCTCAATTTATGGGACTACAACATCACAGACCAATTCCATCCATAGGTGGGACCCCTGGCTTCATAAACAGGATGTATCC AAACAAGTTATATGGTCAGTATGGAAACACAGTGAGGTCTGGTATTGGTTATGGAACACATTATGATTCTCGTACAAATGGAAGAGCTTGGTTAGCTGTT GACAATAAATACAAAAATCGGGGACGTGGTGGTGGGTACTTTGGCTATGGCAATGAGAACGTGGATGGGTTGAATGAACTGAACCGGGGACCTAGAGCCA AAGGTAATAAGAACCAAAAGTGTTTTGCTCCAACAATACTGGCAGTCAAAGGGCAGAACCTGCCTGCAGCTGTAAGCTCCGGTGAGGAGAAAGATAAGAT TAGTGCTGTTCCAGACCTTGATCAGTATAACAAATCTGAGTTTCCTGAAGAATACACTGATGCCAAATTTTTCATCATCAAGTCTTATAGCGAGGATGAC ATCCACAAAAGCATTAAGTATAATGTGTGGGCTAGTACACAAAATGGCAACAAGAAACTTGATGCGGCTTATCAAGAGGCCCAGCAGAAACCTAGTGGTT GTCCTGTATTCCTTTTTTTCTCAGTTAATACCAGTGGGCAATTTGTTGGTGTTGCGGAAATGATTGGTCCAGTTGATTTTAATAGCAGTGTCGAATACTG GCAGCAAGATAAGTGGAATGGTTGCTTTCCTCTTAAGTGGCACATTGTTAAGGATGTTCCTCACAATTTATTGAGGCCCATTACCTTAGAAAACAATGAG A
• Tissue: pods
• Gene name: LI_gene_187425;
• Additional information: details;

Expression of Ll_transcript_296235

FPKM

• PAB: 0.5
• PNAB: 3
• PS1: 3.3
• PS2: 1.7
• PS3: 4.8
• PW1: 1.1
• PW2: 2.8
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296235

• Blastp: YTH domain-containing family protein 1 from Mus with 50% of identity
• Blastx: YTH domain-containing family protein 1 from Mus with 50% of identity
• Eggnog: YTH domain family(ENOG410YABQ)
• Kegg: Link to kegg annotations (228994)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461649.1)
• Pfam: YT521-B-like domain (PF04146.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;