Ll_transcript_296256

• Id Trinity: TRINITY_DN51761_c0_g1_i22
• Name Transcript: Ll_transcript_296256
• Sequence: CAAAAACTAAAACTAATGATAAAAAAACCAACACAACAGCAATCGAACACGTGTACAAATCCACCAATAGTAAGAGAGAAGTAGATGAGAGCGTGACCCG CGGGTGAGATAAAGAAGATAGAGAAAAGAGAGCGTGTTGGTGCTATTTGAATCACCGTTTGAGAATGAACAAAACCCTCTCTCCCTGAAAACCCAATCCC TTGGCGGCTGCGAGAACCTTTTTTTTCTCTCTCTCTCCTCTCTATTTATCTCTTTCTCGCTCCTATTAGGGTTTCGATTTGGGTCTAAAACCCTTTCGAT TTGTGGTTTTCGGATTTCGATTTTGGGCTCTGCTGTTTCTCTTATCTGAAGAATAAGATCTCGTGATTGATTTCAACATGACTACCGTTGCTACTGCCGC TGATCAAGCAACTGATTTGCTGCAAAACTTGACATTAGACACTAAGCCCAAGTCTCTGGAAATTCCTGAGCCAACCAAGAAGGTCTCTGGCAACCAACAT GGAACAGTTGATTCAGGAAATGCTCTGAATGGCCAGATCCCACCTTATGATCGGTCTCTAACACCTCTCTTACAAGATTTTATGGATCCTGCCATGTATT ACTTTCCAAGTGGATACCCATCTCCTGCCTATTATTATAGTGGTTATGATGGGACTGGTAATGAGTGGGAAGATTATTCTAGATTTATGAATCCTGAAGG AGTGGATGTGACTTCTGGACTTTATGGGGATAATGGATCTATGCTGTATCACCATGGATATGGATATGCACCCTATGCACCCTATTCTCCAGCTGGGTCT CCTGTTCCCACCATAGGAAATGATGGACAACTGTATGGGCCACAACACTATCAGTATCCTCAATATTTCCAGCCACTGACTCCAACTAGCGGTGGGTCAT TTGCACCAACTGCAACGGTTCCTCCTCCGGGGGAGATTACCTCATCTGTAGCAGCTGATCAGAAGCCTCTTCCTGTGGAAACAGCTAATGGAAATTCTAA TGGTGTCGCAAATAGTGGCAACACTAAAGGTAACAGTGGTGCTGCACCTGTTAAACCGGCCTATCAAAATTCTTTTACTTCCAATGCTTCAAATAAAAGG GGTGCTGTGCCAGGTCGTGGCCCTACTTCAGGTTATCAGGATCCTAGATTTGTTTTTGATGGAGTACACTCACCTATCCCTTGGTTAGATGCCCCACTAT TTTCAGATGGGCAGCAAAGACCTGTAAGTAGCACAACAATTACATCCTCGGTTTCAGGTGGCATTAACAGCACTGCGTCGAGGAACCAGAATTTCCGTCC TAATTCTCAATTTATGGGACTACAACATCACAGACCAATTCCATCCATAGGTGGGACCCCTGGCTTCATAAACAGGATGTATCCAAACAAGTTATATGGT CAGTATGGAAACACAGTGAGGTCTGGTATTGGTTATGGAACACATTATGATTCTCGTACAAATGGAAGAGCTTGGTTAGCTGTTGACAATAAATACAAAA ATCGGGGACGTGGTGGTGGGTACTTTGGCTATGGCAATGAGAACGTGGATGGGTTGAATGAACTGAACCGGGGACCTAGAGCCAAAGGTAATAAGAACCA AAAGTGTTTTGCTCCAACAATACTGGCAGTCAAAGGGCAGAACCTGCCTGCAGCTGTAAGCTCCGGTGAGGAGAAAGATAAGATTAGTGCTGTTCCAGAC CTTGATCAGTATAACAAATCTGAGTTTCCTGAAGAATACACTGATGCCAAATTTTTCATCATCAAGTCTTATAGCGAGGATGACATCCACAAAAGCATTA AGTATAATGTGTGGGCTAGTACACAAAATGGCAACAAGAAACTTGATGCGGCTTATCAAGAGGCCCAGCAGAAACCTAGTGGTTGTCCTGTATTCCTTTT TTTCTCAGTTAATACCAGTGGGCAATTTGTTGGTGTTGCGGAAATGATTGGTCCAGTTGATTTTAATAGCAGTGTCGAATACTGGCAGCAAGATAAGTGG AATGGTTGCTTTCCTCTTAAGTGGCACATTGTTAAGGATGTTCCTAACAATTTATTGAGGCACATTACCTTAGAAAACAATGAGAGCAAGCCAGTTACTA ACAGTAGGGATACCCAAGAGGTATTGTTGGAGCCAGGTCTGAAGCTGATCAAAATTTTTAAGGAATTTAGCAGCAAGACATGCATCTTGGATGACTTTGC GTTTTATGAGGCTCGCCAGAAGACAATTTTGGAGAAGAAAGCAAAGCAACAAGTCCCAAAGCAGGCATGGGAAGGGAAACCCACTGACGAAAAGGCAGAG TTAAATGAGGAAGTTAAAGCTCAAAACCCTGAAGTTGCCGCAGAATTGCTCAAGGACTTGACTCTATCTGAAAAGGATACTGATGACCACAAACTTTCTA AGAATGAATCTGATGCTAAAACTGGAGATGCCCCAAAGGGTGCTAAACCAGTTGTATCCGGGACCAAAATTGTAACAAATGTGGTTGCTAATGGTTCCTA AACTCTGTTCTATGATGGTGGTCCCAATTTTGTCAGTGGATATATTGCTCCTTAGGCAATTGAATACTGAGCAATTGGTTCCGCCATATTGAATCTGCCT GGCCTTCTCTCCTGTTTGAAGATGATAGATGGACCTGGTAATGATGAAGATCTGTTTGAGATTTGGCTAGGCAGAGTTAGATCATAGAATGCTAGCACCA ACCCCTTTTGGTTGGGTTTTGTTTACAATGGTTAGCTCCTAATAGGTTTTTCTCTCCTTCCTAGGATTCCTGTTCTTAGTTTTTCTGCTTAAAAATCCTT ATATCTTGTTTTTTTATTTGGACTTCATCTGTCTTCCTTTGTTTCCTTTACTTTATTGGCTGTTTCCTGTCTTGTAAATCTACTATGTTGTTTTAGACAG AAGTAGAAGCAAGGTAGGAAACAGTGAAGAAGATATACTGGTTTCAAGTTTTTGGTTTACCTAGTTTTTAAGCTTTATTTATTTATTGTCTGATTGACTT GAGCGTACTGGAGAAAGAGTTTGGACAATCTATTATGTAATAGGGTGTTTTCTGGCTTATGAAGGTGCCCTTTTTGTTTCATTTATATTATTAATATTTA TTTCACCGTTTTTCTCTCCAGGGTTCATAATTTTGTAAACCTTTTCATAATGTAGGTTCTAGTATCTCAAGTTACTAAATACTGTCTTTTGGAATTATCT TTTTTCATATTGTAGAAGTTTTATGTCAAATTTGTATCTTCTAAGTGGTTCTCTTGGATAAGATATTTTTCAATAAACAACGTGGAATTTTAAATAGATA AGGGTGTTCCGTATGGTATCGTGGCTTGTTCATGTTTCAGTTGAAATAGTGTTTCCTTTGCATTCTTATGTTTGTTCTGATGCAGGG
• Tissue: pods
• Gene name: LI_gene_187425;
• Additional information: details;

Expression of Ll_transcript_296256

FPKM

• PAB: 7.2
• PNAB: 24.8
• PS1: 15.2
• PS2: 14.5
• PS3: 18.8
• PW1: 15.3
• PW2: 15.4
• PW3: 12

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296256

• Blastp: YTH domain-containing family protein 1 from Mus with 52.31% of identity
• Blastx: YTH domain-containing family protein 1 from Mus with 52.31% of identity
• Eggnog: YTH domain family(ENOG410YABQ)
• Kegg: Link to kegg annotations (228994)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461640.1)
• Pfam: YT521-B-like domain (PF04146.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;