Ll_transcript_296257

• Id Trinity: TRINITY_DN51761_c0_g1_i23
• Name Transcript: Ll_transcript_296257
• Sequence: AAGTAACCCGCGGGTGAGATAGAGAGTGGGAAAAGAGAGTGTGTTGGTGCTATTTGAATCACCGCTTTTGGATCAGCAAAACCCTTTCTGCCTTAAAACC CAAACCCTTAGCGGCTGCAAGAACCGTTTCTCTTTCTCTCTCTCTGGTTTTGATTCTCTCTCCAATTAGGGTTTCGATTTGGGGCTAAAACCCTTCGATT CAGAGTTGCTCTATTCGGATTTGGATTTTTGAGGTTGTTCCATTTTTCTTCTTGAAGAGGAGAACAAGATCTCGTTATTGATTTCAACATGGCTACTGTT GCTAGTCCCGCTGATCAAGCAACTGATTTACAACAAACGTTGTCATTAGAAACCAAGCCCAAGCCTCTGGAAATTCCTGAGCCTACCGAGAAGGCCTCTG GCAATCAATATGGAACAGTTGATTCTGTAAATGCTCTGAATGGCCAGATCCCTCCTTATGATCGGTCTGTAACACCTCAGTCACAAGAATTTACAGATCC CTCTCTGTGTTACCTTCACCATGGTGGTTACCCGTCTCCTGCCTATTATTATGGTGGCTACGATGGGACTGGCAATGAGTGGGAAGATTATTCTAGACAT TTGAATCATGAAGGAATTGATATGTCTTCTGGAGTTTATGGAGATAGTGGGTCTCTGTTGTATCACCATGGGTATGGATATGCACCCTATGCCCCTTATT CACCAGCAGGGTCTCCAGTTCCAACCATCGGAAATGATGGTCAGCTGTATGGGCCTCAACACTATCAGTATCCTCCATATTTCCCACCGTTGACCCCAAC TAGTGGTGGGTCATTTGCACCAACTGCAACTATTCCTCCGCAGGGCGGGATTACCACCTCTGTAGCTGTTGATCAGAAGCCTCTCCCCGTAGAAACAGCT AATGGAAACTCAAATGGTGCCACAAATGGCAGAAATGCCAAAGGTAATAATGGTTCTGCCCCTGTCAAGCCGGCCTATCAAAACTCATTTAGTTCCAATG CTTCATATGAAAGGGGTGCTGTGCCAAGTCGTGGTCCTAATTCGGGTTATCAGGATCCTAGATTTGGTTTTGATGGAGTACATTCACCTGTCACTTGGTT AGATGCCCCACTATTTTCAGATGGGCAACAAAGACCAGCAAATAGCACAATAATTAGCTCCTCGGTATCAGGTGGCAATAACAGTACTGCATCAAGGAAC CAGACCTTCCGCCCTAATTCTCAATTTATGGGCTTACAACATCCCAGACCAATTCCTGCACTGGGATCAGCCCCTGGTTACATAAATAGGATGTATTCAA ACAAGTTATATAATCAGTATGGAAACACAGTGAGATCTAGTATTGGTTATGGAACACATGGATATGAATCTCGCACTAATGGACGAGGTTGGTTAGCTGT TGACAATAAATACAAAAGTAGGGGACGAAGTGGTGGGTACTTTGGCTATGGCAATGACAATACAGATGGTTTGAATGAACTGAACCGCGGACCTAGAGCC AAGAGCAATAAGAACCAAAAGGGTTTTGCTCCAACAATACTGGCAGTCAAAGGGCAGAACTTGCCTGCGGCTCTAAGCACAAGTGAGGAGAAAGATAAGA CTATTTCTGTTCCAGACCTTGATCAGTATAACAATGTTGAGTTTCCTGAAGAATACACTGATGCCAAATTTTTTATCATCAAGTCTTACAGTGAGGATGA TGTCCACAAAAGCATAAAATATAATGTGTGGGCTAGTACACAAAATGGCAACAAGAAACTTGATGCTGCTTATCAGGAGGCCCAGCAGAAACCTGGCGGT TGCCCTGTATTCCTTTTTTTCTCGGTTAATACCAGTGGCCAATTTGTTGGTCTTGCGGAAATGATTGGTCCAGTTGATTTTAATAGCAGTGTCGAATACT GGCAGCAAGATAAGTGGAATGGTTGCTTTCCTCTTAAGTGGCACATTGTTAAGGATGTTCCTAACAATTTATTGAGGCACATTACCTTAGAAAACAATGA GAGCAAGCCAGTTACTAACAGTAGGGATACCCAAGAGGTATTGTTGGAGCCAGGTCTGAAGCTGATCAAAATTTTTAAGGAATTTAGCAGCAAGACATGC ATCTTGGATGACTTTGCGTTTTATGAGGCTCGCCAGAAGACAATTTTGGAGAAGAAAGCAAAGCAACAAGTCCCAAAGCAGGCATGGGAAGGGAAACCCA CTGACGAAAAGGCAGAGTTAAATGAGGAAGTTAAAGCTCAAAACCCTGAAGTTGCCGCAGAATTGCTCAAGGACTTGACTCTATCTGAAAAGGATACTGA TGACCACAAACTTTCTAAGAATGAATCTGATGCTAAAACTGGAGATGCCCCAAAGGGTGCTAAACCAGTTGTATCCGGGACCAAAATTGTAACAAATGTG GTTGCTAATGGTTCCTAAACTCTGTTCTATGATGGTGGTCCCAATTTTGTCAGTGGATATATTGCTCCTTAGGCAATTGAATACTGAGCAATTGGTTCCG CCATATTGAATCTGCCTGGCCTTCTCTCCTGTTTGAAGATGATAGATGGACCTGGTAATGATGAAGATCTGTTTGAGATTTGGCTAGGCAGAGTTAGATC ATAGAATGCTAGCACCAACCCCTTTTGGTTGGGTTTTGTTTACAATGGTTAGCTCCTAATAGGTTTTTCTCTCCTTCCTAGGATTCCTGTTCTTAGTTTT TCTGCTTAAAAATCCTTATATCTTGTTTTTTTATTTGGACTTCATCTGTCTTCCTTTGTTTCCTTTACTTTATTGGCTGTTTCCTGTCTTGTAAATCTAC TATGTTGTTTTAGACAGAAGTAGAAGCAAGGTAGGAAACAGTGAAGAAGATATACTGGTTTCAAGTTTTTGGTTTACCTAGTTTTTAAGCTTTATTTATT TATTGTCTGATTGACTTGAGCGTACTGGAGAAAGAGTTTGGACAATCTATTATGTAATAGGGTGTTTTCTGGCTTATGAAGGTGCCCTTTTTGTTTCATT TATATTATTAATATTTATTTCACCGTTTTTCTCTCCAGGGTTCATAATTTTGTAAACCTTTTCATAATGTAGGTTCTAGTATCTCAAGTTACTAAATACT GTCTTTTGGAATTATCTTTTTTCATATTGTAGAAGTTTTATGTCAAATTTGTATCTTCTAAGTGGTTCTCTTGGATAAGATATTTTTCAATAAACAACGT GGAATTTTAAATAGATAAGGGTGTTCCGTATGGTATCGTGGCTTGTTCATGTTTCAGTTGAAATAGTGTTTCCTTTGCATTCTTATGTTTGTTCTGATGC AGGG
• Tissue: pods
• Gene name: LI_gene_187425;
• Additional information: details;

Expression of Ll_transcript_296257

FPKM

• PAB: 1.5
• PNAB: 5.7
• PS1: 6.2
• PS2: 3.9
• PS3: 5.7
• PW1: 4.3
• PW2: 5.1
• PW3: 5.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296257

• Blastp: YTH domain-containing family protein 2 from Mus with 53.26% of identity
• Blastx: YTH domain-containing family protein 2 from Mus with 51.27% of identity
• Eggnog: YTH domain family(ENOG410YABQ)
• Kegg: Link to kegg annotations (213541)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444219.1)
• Pfam: YT521-B-like domain (PF04146.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;