Ll_transcript_296265

• Id Trinity: TRINITY_DN51761_c0_g1_i30
• Name Transcript: Ll_transcript_296265
• Sequence: CGTTGTTCTCTCTTTCTCTCTCCTTGTTCCTCTCTCTCTCTCTCTCTCTCCCTCTCCCTCCCTCTCTCTTTCTCTCTCTCTCTAGTCCTATTAGGTTTTC GATTTGGGTCTAAAACCCTTCGATTCTGATTTGCTCTATTCGGATTTAAGGGGTCTGCGATTTCTTTTTTCTTCTAGAAGTACAAGATCTTGTTATCGAT TTGGATATGGCTACTGTTGCTAGTCCCGCTGATCGTATCCTTATTCAAAGTTTTCTGTTTTATTTTGTCTCTTCTTCTGTGAAATTCAAGTGTTTTGTTA TTGGTTTTCTGATTTGTTTTTTTGTTAACCTCTAATTGGATCTATAAAGGATTTGAGTTTTGCTGTGATATCTGGTGTAGGGTTTAGTGGGATTTTTTGT TGTTTTGGGATTTAAGCTATATGTTTGTTCACATGTTTGTGTGTATAGAGAGTTTTTGAATTTTCGTGGAGATTGACTTTCGGGCTTGAAATACTCTGAA TTGAGCCATTTGAGTTTTTGGGTGGTTTTGTGAATTTGTGTTATAAAGTTATGGGTTCTATGTTTTGTGGGTATAGGATACTTTCTGCATTTTGTGCCAG GGTTTATGCTTGCTGAAAACTTCCATTCTGTGAATGTTGTCTTCCTTCACCATATGCTTTACACAGAAGCAACTGATTTGCTGCAAACGTTGCCACTAGA CTCTAAGCCCAAGCCTCTGGAAATTCCTGAGCCCACCAAGAAGCCCTCTGGCAACCAATACGGAACAGTTGATTCAGGAAATGCTCTGAATGGCCAGGTC GCACCCTATGATCGGGCCACAACACCTGTTATACAAGAATTTACGGATCCCAACTTGTGTTACCTTCCAAGTGGTTACCCGTCTACAGCCTATTATTATG GTGGCTACAATGGGACTGGTAACGAGTGGGAAGATTATTCAAGATTTCTGAATCCTGAAGGAGTTGATATCACTTCTGGAATTTATGGGGATAATGGGTC AGTGGTATATCACCATGGATATGGATATGCACCATATGCCCCTTATTCGCCAGCAGGGTCCCCAGTTCCAACCATTGGAAATGATGGGCAGCTGTATGGG CCTCAACACTATCAGTATCCTCCATATTTCCCACCGTTGACCCCAACTAGTGGTGGGTCATTTGCACCAACTGCAACTATTCCTCCGCAGGGCGGGATTA CCACCTCTGTAGCTGTTGATCAGAAGCCTCTCCCCGTAGAAACAGCTAATGGAAACTCAAATGGTGCCACAAATGGCAGAAATGCCAAAGGTAATAATGG TTCTGCCCCTGTCAAGCCGGCCTATCAAAACTCATTTAGTTCCAATGCTTCATATGAAAGGGGTGCTGTGCCAAGTCGTGGTCCTAATTCGGGTTATCAG GATCCTAGATTTGGTTTTGATGGAGTACATTCACCTGTCACTTGGTTAGATGCCCCACTATTTTCAGATGGGCAACAAAGACCAGCAAATAGCACAATAA TTAGCTCCTCGGTATCAGGTGGCAATAACAGTACTGCATCAAGGAACCAGACCTTCCGCCCTAATTCTCAATTTATGGGTTTACAACACCCAAGACCAAT TCCTGCCCTGGGAGCAAACCCTGGCTTCATAAACAGGATGTATCCTAATAAGTTGTATGGTCAGTATGGGAACCCAATTAGATCGGGCATGGGTTATGGA GCACATGGATATGATTCTCGCACAAATGGACGGGCTTGGTTAGCTGTTGACAATAAATACAAAACTAGAGGACGTAGTGGTGGTTACTTTGGCTATGGCA ATGATAACGTGGATGGTTTGAATGAACTGAACAGGGGACCTAGAGCCAAAGGCAATAAGAACCAAAAAGGGTTTACTCCAACTACTATTGCAGTCAAAGG GCAGAATTTGCCTGCAATTCTAAGCATTGGTGAGGAGAAAGATAAGACCATTTCCACTCCAGACCTCAATCAATATAACAAAGCTGAGTTTCCTGAAGAA TACACTGATGCCAAATTTTTTATCATCAAGTCTTATAGCGAGGATGATATCCATAAAAGCATCAAGTATAATGTGTGGGCTAGTACACAAAATGGTAACA AGAAACTGGATGCTGCATATCAGGATGCCCAGCAGAAACCTGGTGGCAGCCCTGTGTTCCTGTTTTTCTCGGTTAATACTAGTGGACAATTTGTTGGTGT CGCCGAGATGATTGGTCCAGTTGATTTTAACAAGAGTCTTGAGTACTGGCAGCAAGACAAGTGGAATGGTTGCTTTCCTCTTAAGTGGCACATTGTTAAA GATGTTCCTAACAATTTGTTGAGGCACATTACTTTGGAAAACAATGAGAATAAGCCTGTGACTAACAGTAGGGATACCCAAGAGGTATTTTTGGAGCAAG GTTTGAAACTGATCAAAATTTTTAAGGAGTACGCCAGCAAGACATGCATCTTGGATGATTTTGGATTCTACGAGGCACGTCAGAAGACAATTTTGGAGAA GAAAGCTAAGCAACAATACCCAAAGCAGGTATGGGAAGGAAAGCCCACTGATGAGAAAACAGAGGTGAACGATGAAGTTAAAGCTCAAAATCCTGAAGTT GCCACAGAATTGCTCAAGAACTTGAGTCTAGCTGAGAAGGATAGTGATGGCCACAAACATTCTGAGACTGGATCTGTTTCTAAAACTGGAGATGCCCCAA AGGGTGCTAAACCAGTTGTATCTGAGACTAAACCATAGCAAATGGTTGCTAAGCTCTGTTCGATGATGGCGGACCCAATCTCGTGTCAGTTGGTTGATAC CCGAGCAGTTGGTTCTGCCTTATCGAATCTGCCTGGCCTTCTCTTGTCTGAAGATGATAGGTGAAGTGGTGATATGATAAAGATGTGTATATTTGAGATT GGCAGGGTGGGAGGTAGATCATAGAATGCTAACCCCTTTGAGTTGGGTTTTGTTTACAGTGGTTAGCTCCTAATAGGTTTTCTTTACTGCCTAGGGTTTT GGGTTTTAGGTTCTCTGCTTAAAGATCTGCTTATATCTTTTTCTTATGTGTGGACTTCTTTTCTCTTAGTTCATTTTCTTTTTATCTGTTTCCTTGGTCG TTTTCTGCCATGTAAAACCCAGATCTCCTTGGCTGCAGAGTAGCTTCCTTCTGTTACTTTCAACCGAAGTAGAAGCAAGGTGGGAAATAGTGAAAAATAT ACTTGGCTTTATAAGTTTTCTTTCCCTTATAAGTTTAACTTTTATTCTCTGTTTAGACAATCTATTATGTTAATTGGGGGTTTTCCGGCTAGAAGGTTCC CCTTTTATTTTTGTGAAGGTACCTTTTATTTTTGCTTAGTTCATGGGTCCATTTTAATACTTGTTTATATTAAATGTTTTGGAAACAACTCTATTTTTCA AATTATTAACCATTCTTGCAACC
• Tissue: pods
• Gene name: LI_gene_187425;
• Additional information: details;

Expression of Ll_transcript_296265

FPKM

• PAB: 0.1
• PNAB: 0.6
• PS1: 0.3
• PS2: 0.1
• PS3: 0.1
• PW1: 0.2
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296265

• Blastp: YTH domain-containing family protein 2 from Homo with 55.98% of identity
• Blastx: YTH domain-containing family protein 2 from Danio with 52.2% of identity
• Eggnog: YTH domain family(ENOG410YABQ)
• Kegg: Link to kegg annotations (51441)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444219.1)
• Pfam: YT521-B-like domain (PF04146.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;