Id Trinity | TRINITY_DN51761_c0_g1_i32 |
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Name Transcript | Ll_transcript_296267 |
Sequence | CAAAAACTAAAACTAATGATAAAAAAACCAACACAACAGCAATCGAACACGTGTACAAATCCACCAATAGTAAGAGAGAAGTAGATGAGAGCGTGACCCG CGGGTGAGATAAAGAAGATAGAGAAAAGAGAGCGTGTTGGTGCTATTTGAATCACCGTTTGAGAATGAACAAAACCCTCTCTCCCTGAAAACCCAATCCC TTGGCGGCTGCGAGAACCTTTTTTTTCTCTCTCTCTCCTCTCTATTTATCTCTTTCTCGCTCCTATTAGGGTTTCGATTTGGGTCTAAAACCCTTTCGAT TTGTGGTTTTCGGATTTCGATTTTGGGCTCTGCTGTTTCTCTTATCTGAAGAATAAGATCTCGTGATTGATTTCAACATGACTACCGTTGCTACTGCCGC TGATCAAGCAACTGATTTGCTGCAAAACTTGACATTAGACACTAAGCCCAAGTCTCTGGAAATTCCTGAGCCAACCAAGAAGGTCTCTGGCAACCAACAT GGAACAGTTGATTCAGGAAATGCTCTGAATGGCCAGATCCCACCTTATGATCGGTCTCTAACACCTCTCTTACAAGATTTTATGGATCCTGCCATGTATT ACTTTCCAAGTGGATACCCATCTCCTGCCTATTATTATAGTGGTAAGTTAACAGATTAATGCCTCACTGGATGACTTCTTATAATTACTTGCTTGATTAC TTTATGTTGGATAATGTAGAAGTATAATAATTTTATTAGAAATATTATAAATTTATGTATACGGAATTTTATATAATTTTAGGTTATGATGGGACTGGTA ATGAGTGGGAAGATTATTCTAGATTTATGAATCCTGAAGGAGTGGATGTGACTTCTGGACTTTATGGGGATAATGGATCTATGCTGTATCACCATGGATA TGGATATGCACCCTATGCACCCTATTCTCCAGCTGGGTCTCCTGTTCCCACCATAGGAAATGATGGACAACTGTATGGGCCACAACACTATCAGTATCCT CAATATTTCCAGCCATTGACCCCAACTAGTGGTGGGTCTTTTGCACCAACTGCAACGGTTCCTCCTCAGAGGGAGATCGCTACTTCTGTAGCTGCTGCTG ATCAGAAACCTCTGCCTGTGGAAACAGCTAATGGGAACTCTAATGGTGTTACAAATGGCGGAAACACAAAAGGTCGTGGTCCTACTTCAGGTTATCAGGA TCCTAGATTTGTTTTTGATGGGGTACGCTCACCTGTCCATTGGGTAGATGCCCCACTATTTTCAGATGTTCAGCAAAAACCTGCAAGCAGCTCATCAATC ACCTCCACAGTACCAGGTGGCAATAACAGTACTGCATCAAGGAACCAGACCTTCCGCCCTAATTCTCAATTTATGGGTTTACAACACCCAAGACCAATTC CTGCCCTGGGAGCAAACCCTGGCTTCATAAACAGGATGTATCCTAATAAGTTGTATGGTCAGTATGGGAACCCAATTAGATCGGGCATGGGTTATGGAGC ACATGGATATGATTCTCGCACAAATGGACGGGCTTGGTTAGCTGTTGACAATAAATACAAAACTAGAGGACGTAGTGGTGGTTACTTTGGCTATGGCAAT GATAACGTGGATGGTTTGAATGAACTGAACAGGGGACCTAGAGCCAAAGGCAATAAGAACCAAAAAGGGTTTACTCCAACTACTATTGCAGTCAAAGGGC AGAATTTGCCTGCAATTCTAAGCATTGGTGAGGAGAAAGATAAGACCATTTCCACTCCAGACCTCAATCAATATAACAAAGCTGAGTTTCCTGAAGAATA CACTGATGCCAAATTTTTTATCATCAAGTCTTATAGCGAGGATGATATCCATAAAAGCATCAAGTATAATGTGTGGGCTAGTACACAAAATGGTAACAAG AAACTGGATGCTGCATATCAGGATGCCCAGCAGAAACCTGGTGGCAGCCCTGTGTTCCTGTTTTTCTCGGTTAATACTAGTGGACAATTTGTTGGTGTCG CCGAGATGATTGGTCCAGTTGATTTTAACAAGAGTCTTGAGTACTGGCAGCAAGACAAGTGGAATGGTTGCTTTCCTCTTAAATGGCACATTGTTAAGGA TGTTCCTAACAATCTGTTGAGGCACATAACATTGGAAAACAATGAGAATAAGCCGGTCACTAACAGCAGGGATACCCAAGAGGTATTGTTGGAGCCTGGT CTGAAGCTGATCAAAATTTTTAAAGAGTATACCAGCAAGACATGCATCTTAGATGATTTTGGGTTCTACGAGTCTCGACAGAAGACAATTTTGGAGAAAA AAGTGAAGCAACAACACCCGAAGCAGGTATGGGAGGGAAAGTCCACTGATGAGAAGACAGAGATAAATGGTGAACTTAAAGCTCAAAATCTGGGAGTGGC ATCAGAATTGCTCAAAGACTTGACTCTAGCTAAGAAGGATACTGATGACCACAAACTTTCTGAGAATGGATCTGTTGCTAAAACTGGAGATGCCCCAAAG GGTGCTAAGCCAGTTGTATCTGAGACCAAGATTGCAGCAAATGGTACTGCTAATGGTTACTAAGCCCTGTTCAGTGATGGCGGTGCCAATCTTGTATCAG TGGATTATATATTGCTCCTTAGAGAATGGAATACCTTAGCTATTGGCTCCGCCTCATTGAATCTGTCTGGCCTTCTCTTTCTCTGAAGATGATAGGGGGA CTGGTGATGATAAAGATCTGTATATTTGAGATTGGCTGGGAGGAGGTAGTTCATAGAATGTTAGTACCAACACCCTTTTCTTTGGGTTTTGTTTTACAGT GGTTAGCTCCAAATAGGTTTTGTTTACTGCCCTAGGTTTTGGGTTTTTTTAGTTTTTCTGCTTAAAAGATCTGCTTACATATTGTTTTTTTCGTTTGGAC TTCATCCTTTCGTTTTCCTTTATTTTCTTCCCGTCTATTTCCTTTACTTGTTGGTGGTCGTTTCCTGTCTTGTAAATCTTGATCTACTTGGTTGTTACTT CCAACATAGGTAGATACAAGATGGGAAATAGTGAAAAAATATACTGGCTTTTTATGTTTTTGGTCTCCCTAGTTTTTATTTATTGTATGATGATTGATTG AGCATATTGGAGAATGCATGTTTGGACAATCTATTATGTTGTAATAGGGTGTTTTCTGTCTATAAAGGCCACCGGTATGATTACTTCACGTCCTCTTGTC CTTATTTTCAACTTTATAGTTTTCTTCCCTGCAATGTTGAATGATGCTTATTTCTTATATATATATGTTAACAGATCTTCGTGTCTTTAAAGCAAGTTTA GTAGTTTC BLAST |
Tissue | pods |
Gene name | LI_gene_187425; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_296267
Blastp | YTH domain-containing family protein 2 from Mus with 56.22% of identity |
---|---|
Blastx | YTH domain-containing family protein 2 from Mus with 56.52% of identity |
Eggnog | YTH domain family(ENOG410YABQ) |
Kegg | Link to kegg annotations (213541) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463716.1) |
Pfam | YT521-B-like domain (PF04146.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |