Ll_transcript_296268

• Id Trinity: TRINITY_DN51761_c0_g1_i33
• Name Transcript: Ll_transcript_296268
• Sequence: CGTTGTTCTCTCTTTCTCTCTCCTTGTTCCTCTCTCTCTCTCTCTCTCTCCCTCTCCCTCCCTCTCTCTTTCTCTCTCTCTCTAGTCCTATTAGGTTTTC GATTTGGGTCTAAAACCCTTCGATTCTGATTTGCTCTATTCGGATTTAAGGGGTCTGCGATTTCTTTTTTCTTCTAGAAGTACAAGATCTTGTTATCGAT TTGGATATGGCTACTGTTGCTAGTCCCGCTGATCGTATCCTTATTCAAAGTTTTCTGTTTTATTTTGTCTCTTCTTCTGTGAAATTCAAGTGTTTTGTTA TTGGTTTTCTGATTTGTTTTTTTGTTAACCTCTAATTGGATCTATAAAGGATTTGAGTTTTGCTGTGATATCTGGTGTAGGGTTTAGTGGGATTTTTTGT TGTTTTGGGATTTAAGCTATATGTTTGTTCACATGTTTGTGTGTATAGAGAGTTTTTGAATTTTCGTGGAGATTGACTTTCGGGCTTGAAATACTCTGAA TTGAGCCATTTGAGTTTTTGGGTGGTTTTGTGAATTTGTGTTATAAAGTTATGGGTTCTATGTTTTGTGGGTATAGGATACTTTCTGCATTTTGTGCCAG GGTTTATGCTTGCTGAAAACTTCCATTCTGTGAATGTTGTCTTCCTTCACCATATGCTTTACACAGAAGCAACTGATTTGCTGCAAACGTTGCCACTAGA CTCTAAGCCCAAGCCTCTGGAAATTCCTGAGCCCACCAAGAAGCCCTCTGGCAACCAATACGGAACAGTTGATTCAGGAAATGCTCTGAATGGCCAGGTC GCACCCTATGATCGGGCCACAACACCTGTTATACAAGAATTTACGGATCCCAACTTGTGTTACCTTCCAAGTGGTTACCCGTCTACAGCCTATTATTATG GTGGCTACAATGGGACTGGTAACGAGTGGGAAGATTATTCAAGATTTCTGAATCCTGAAGGAGTTGATATCACTTCTGGAATTTATGGGGATAATGGGTC AGTGGTATATCACCATGGATATGGATATGCACCATATGCCCCTTATTCGCCAGCAGGGTCCCCAGTTCCAACCATTGGAAATGATGGGCAGCTGTATGGG CCTCAACACTATCAGTATCCTCCATATTTCCCACCGTTGACCCCAACTAGTGGTGGGTCATTTGCACCAACTGCAACTATTCCTCCGCAGGGCGGGATTA CCACCTCTGTAGCTGTTGATCAGAAGCCTCTCCCCGTAGAAACAGCTAATGGAAACTCAAATGGTGCCACAAATGGCAGAAATGCCAAAGGTAATAATGG TTCTGCCCCTGTCAAGCCGGCCTATCAAAACTCATTTAGTTCCAATGCTTCATATGAAAGGGGTGCTGTGCCAAGTCGTGGTCCTAATTCGGGTTATCAG GATCCTAGATTTGGTTTTGATGGAGTACATTCACCTGTCACTTGGTTAGATGCCCCACTATTTTCAGATGGGCAACAAAGACCAGCAAATAGCACAATAA TTAGCTCCTCGGTATCAGGTGGCAATAACAGTACTGCATCAAGGAACCAGACCTTCCGCCCTAATTCTCAATTTATGGGTTTACAACACCCAAGACCAAT TCCTGCCCTGGGAGCAAACCCTGGCTTCATAAACAGGATGTATCCTAATAAGTTGTATGGTCAGTATGGGAACCCAATTAGATCGGGCATGGGTTATGGA GCACATGGATATGATTCTCGCACAAATGGACGGGCTTGGTTAGCTGTTGACAATAAATACAAAACTAGAGGACGTAGTGGTGGTTACTTTGGCTATGGCA ATGATAACGTGGATGGTTTGAATGAACTGAACAGGGGACCTAGAGCCAAAGGCAATAAGAACCAAAAAGGGTTTACTCCAACTACTATTGCAGTCAAAGG GCAGAATTTGCCTGCAATTCTAAGCATTGGTGAGGAGAAAGATAAGACCATTTCCACTCCAGACCTCAATCAATATAACAAAGCTGAGTTTCCTGAAGAA TACACTGATGCCAAATTTTTTATCATCAAGTCTTATAGCGAGGATGATATCCATAAAAGCATCAAGTATAATGTGTGGGCTAGTACACAAAATGGTAACA AGAAACTGGATGCTGCATATCAGGATGCCCAGCAGAAACCTGGTGGCAGCCCTGTGTTCCTGTTTTTCTCGGTTAATACTAGTGGACAATTTGTTGGTGT CGCCGAGATGATTGGTCCAGTTGATTTTAACAAGAGTCTTGAGTACTGGCAGCAAGACAAGTGGAATGGTTGCTTTCCTCTTAAATGGCACATTGTTAAG GATGTTCCTAACAATCTGTTGAGGCACATAACATTGGAAAACAATGAGAATAAGCCGGTCACTAACAGCAGGGATACCCAAGAGGTATTGTTGGAGCCTG GTCTGAAGCTGATCAAAATTTTTAAAGAGTATACCAGCAAGACATGCATCTTAGATGATTTTGGGTTCTACGAGTCTCGACAGAAGACAATTTTGGAGAA AAAAGTGAAGCAACAACACCCGAAGCAGGTATGGGAGGGAAAGTCCACTGATGAGAAGACAGAGATAAATGGTGAACTTAAAGCTCAAAATCTGGGAGTG GCATCAGAATTGCTCAAAGACTTGACTCTAGCTAAGAAGGATACTGATGACCACAAACTTTCTGAGAATGGATCTGTTGCTAAAACTGGAGATGCCCCAA AGGGTGCTAAGCCAGTTGTATCTGAGACCAAGATTGCAGCAAATGGTACTGCTAATGGTTACTAAGCCCTGTTCAGTGATGGCGGTGCCAATCTTGTATC AGTGGATTATATATTGCTCCTTAGAGAATGGAATACCTTAGCTATTGGCTCCGCCTCATTGAATCTGTCTGGCCTTCTCTTTCTCTGAAGATGATAGGGG GACTGGTGATGATAAAGATCTGTATATTTGAGATTGGCTGGGAGGAGGTAGTTCATAGAATGTTAGTACCAACACCCTTTTCTTTGGGTTTTGTTTTACA GTGGTTAGCTCCAAATAGGTTTTGTTTACTGCCCTAGGTTTTGGGTTTTTTTAGTTTTTCTGCTTAAAAGATCTGCTTACATATTGTTTTTTTCGTTTGG ACTTCATCCTTTCGTTTTCCTTTATTTTCTTCCCGTCTATTTCCTTTACTTGTTGGTGGTCGTTTCCTGTCTTGTAAATCTTGATCTACTTGGTTGTTAC TTCCAACATAGGTAGATACAAGATGGGAAATAGTGAAAAAATATACTGGCTTTTTATGTTTTTGGTCTCCCTAGTTTTTATTTATTGTATGATGATTGAT TGAGCATATTGGAGAATGCATGTTTGGACAATCTATTATGTTGTAATAGGGTGTTTTCTGTCTATAAAGGCCACCGGTATGATTACTTCACGTCCTCTTG TCCTTATTTTCAACTTTATAGTTTTCTTCCCTGCAATGTTGAATGATGCTTATTTCTTATATATATATGTTAACAGATCTTCGTGTCTTTAAAGCAAGTT TAGTAGTTTC
• Tissue: pods
• Gene name: LI_gene_187425;
• Additional information: details;

Expression of Ll_transcript_296268

FPKM

• PAB: 0.7
• PNAB: 2.2
• PS1: 1.7
• PS2: 0.8
• PS3: 1.4
• PW1: 2
• PW2: 1.7
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296268

• Blastp: YTH domain-containing family protein 2 from Mus with 56.22% of identity
• Blastx: YTH domain-containing family protein 2 from Macaca with 56.52% of identity
• Eggnog: YTH domain family(ENOG410YABQ)
• Kegg: Link to kegg annotations (213541)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461640.1)
• Pfam: YT521-B-like domain (PF04146.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;