Ll_transcript_296238

• Id Trinity: TRINITY_DN51761_c0_g1_i5
• Name Transcript: Ll_transcript_296238
• Sequence: AAGTAACCCGCGGGTGAGATAGAGAGTGGGAAAAGAGAGTGTGTTGGTGCTATTTGAATCACCGCTTTTGGATCAGCAAAACCCTTTCTGCCTTAAAACC CAAACCCTTAGCGGCTGCAAGAACCGTTTCTCTTTCTCTCTCTCTGGTTTTGATTCTCTCTCCAATTAGGGTTTCGATTTGGGGCTAAAACCCTTCGATT CAGAGTTGCTCTATTCGGATTTGGATTTTTGAGGTTGTTCCATTTTTCTTCTTGAAGAGGAGAACAAGATCTCGTTATTGATTTCAACATGGCTACTGTT GCTAGTCCCGCTGATCAAGCAACTGATTTACAACAAACGTTGTCATTAGAAACCAAGCCCAAGCCTCTGGAAATTCCTGAGCCTACCGAGAAGGCCTCTG GCAATCAATATGGAACAGTTGATTCTGTAAATGCTCTGAATGGCCAGATCCCTCCTTATGATCGGTCTGTAACACCTCAGTCACAAGAATTTACAGATCC CTCTCTGTGTTACCTTCACCATGGTGGTTACCCGTCTCCTGCCTATTATTATGGTGGCTACGATGGGACTGGCAATGAGTGGGAAGATTATTCTAGACAT TTGAATCATGAAGGAATTGATATGTCTTCTGGAGTTTATGGAGATAGTGGGTCTCTGTTGTATCACCATGGGTATGGATATGCACCCTATGCCCCTTATT CACCAGCAGGGTCTCCAGTTCCAACCATCGGAAATGATGGTCAGCTGTATGGGCCTCAACACTATCAGTATCCTCCATATTTCCCACCGTTGACCCCAAC TAGTGGTGGGTCATTTGCACCAACTGCAACTATTCCTCCGCAGGGCGGGATTACCACCTCTGTAGCTGTTGATCAGAAGCCTCTCCCCGTAGAAACAGCT AATGGAAACTCAAATGGTGCCACAAATGGCAGAAATGCCAAAGGTAATAATGGTTCTGCCCCTGTCAAGCCGGCCTATCAAAACTCATTTAGTTCCAATG CTTCATATGAAAGGGGTGCTGTGCCAAGTCGTGGTCCTAATTCGGGTTATCAGGATCCTAGATTTGGTTTTGATGGAGTACATTCACCTGTCACTTGGTT AGATGCCCCACTATTTTCAGATGGGCAACAAAGACCAGCAAATAGCACAATAATTAGCTCCTCGGTATCAGGTGGCAATAACAGTACTGCATCAAGGAAC CAGACCTTCCGCCCTAATTCTCAATTTATGGGTTTACAACACCCAAGACCAATTCCTGCCCTGGGAGCAAACCCTGGCTTCATAAACAGGATGTATCCTA ATAAGTTGTATGGTCAGTATGGGAACCCAATTAGATCGGGCATGGGTTATGGAGCACATGGATATGATTCTCGCACAAATGGACGGGCTTGGTTAGCTGT TGACAATAAATACAAAACTAGAGGACGTAGTGGTGGTTACTTTGGCTATGGCAATGATAACGTGGATGGTTTGAATGAACTGAACAGGGGACCTAGAGCC AAAGGCAATAAGAACCAAAAAGGGTTTACTCCAACTACTATTGCAGTCAAAGGGCAGAATTTGCCTGCAATTCTAAGCATTGGTGAGGAGAAAGATAAGA CCATTTCCACTCCAGACCTCAATCAATATAACAAAGCTGAGTTTCCTGAAGAATACACTGATGCCAAATTTTTTATCATCAAGTCTTATAGCGAGGATGA TATCCATAAAAGCATCAAGTATAATGTGTGGGCTAGTACACAAAATGGTAACAAGAAACTGGATGCTGCATATCAGGATGCCCAGCAGAAACCTGGTGGC AGCCCTGTGTTCCTGTTTTTCTCGGTTAATACTAGTGGACAATTTGTTGGTGTCGCCGAGATGATTGGTCCAGTTGATTTTAACAAGAGTCTTGAGTACT GGCAGCAAGACAAGTGGAATGGTTGCTTTCCTCTTAAATGGCACATTGTTAAGGATGTTCCTAACAATCTGTTGAGGCACATAACATTGGAAAACAATGA GAATAAGCCGGTCACTAACAGCAGGGATACCCAAGAGGTATTGTTGGAGCCTGGTCTGAAGCTGATCAAAATTTTTAAAGAGTATACCAGCAAGACATGC ATCTTAGATGATTTTGGGTTCTACGAGTCTCGACAGAAGACAATTTTGGAGAAAAAAGTGAAGCAACAACACCCGAAGCAGGTATGGGAGGGAAAGTCCA CTGATGAGAAGACAGAGATAAATGGTGAACTTAAAGCTCAAAATCTGGGAGTGGCATCAGAATTGCTCAAAGACTTGACTCTAGCTAAGAAGGATACTGA TGACCACAAACTTTCTGAGAATGGATCTGTTGCTAAAACTGGAGATGCCCCAAAGGGTGCTAAGCCAGTTGTATCTGAGACCAAGATTGCAGCAAATGGT ACTGCTAATGGTTACTAAGCCCTGTTCAGTGATGGCGGTGCCAATCTTGTATCAGTGGATTATATATTGCTCCTTAGAGAATGGAATACCTTAGCTATTG GCTCCGCCTCATTGAATCTGTCTGGCCTTCTCTTTCTCTGAAGATGATAGGGGGACTGGTGATGATAAAGATCTGTATATTTGAGATTGGCTGGGAGGAG GTAGTTCATAGAATGTTAGTACCAACACCCTTTTCTTTGGGTTTTGTTTTACAGTGGTTAGCTCCAAATAGGTTTTGTTTACTGCCCTAGGTTTTGGGTT TTTTTAGTTTTTCTGCTTAAAAGATCTGCTTACATATTGTTTTTTTCGTTTGGACTTCATCCTTTCGTTTTCCTTTATTTTCTTCCCGTCTATTTCCTTT ACTTGTTGGTGGTCGTTTCCTGTCTTGTAAATCTTGATCTACTTGGTTGTTACTTCCAACATAGGTAGATACAAGATGGGAAATAGTGAAAAAATATACT GGCTTTTTATGTTTTTGGTCTCCCTAGTTTTTATTTATTGTATGATGATTGATTGAGCATATTGGAGAATGCATGTTTGGACAATCTATTATGTTGTAAT AGGGTGTTTTCTGTCTATAAAGGCCACCGGTATGATTACTTCACGTCCTCTTGTCCTTATTTTCAACTTTATAGTTTTCTTCCCTGCAATGTTGAATGAT GCTTATTTCTTATATATATATGTTAACAGATCTTCGTGTCTTTAAAGCAAGTTTAGTAGTTTC
• Tissue: pods
• Gene name: LI_gene_187425;
• Additional information: details;

Expression of Ll_transcript_296238

FPKM

• PAB: 12
• PNAB: 20.3
• PS1: 22.4
• PS2: 19.8
• PS3: 24.9
• PW1: 20.7
• PW2: 24.7
• PW3: 25.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296238

• Blastp: YTH domain-containing family protein 2 from Bos with 56.22% of identity
• Blastx: YTH domain-containing family protein 2 from Macaca with 56.52% of identity
• Eggnog: YTH domain family(ENOG410YABQ)
• Kegg: Link to kegg annotations (541050)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444219.1)
• Pfam: YT521-B-like domain (PF04146.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;