Id Trinity | TRINITY_DN51765_c2_g2_i4 |
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Name Transcript | Ll_transcript_295273 |
Sequence | CGCAACGTTCTCTTATGTGTCCTAATTCTTCTTTAACTGAAAAAACAAATATCACACAACACAAAACTAACATTTATCTATTAATTCAACAAACTCAACG TGATTATCCCAATTCATTATTAGGGTTTTCATTTTAATTTCAAAATTGAAATTCAAATGGGTAACGATGATGATGTTGTTGATGGAGACACCAATTCATC CTTTGCTTCCGTGTCTTGTTCAATTTGCTTCGATGTTGTTGCTGATAATGGAGATAGATCTTGGGCTAAGCTTCAATGTGGCCATCAATTTCATCTTGCG GTTTGATGAGTTACTGCATATGCAAATGGTTTCTCATATCCCACGGATGATAGTCGCTCGAGTCTCATCATTCTTGTTAAAACTGACAGAAGCTAACTAT TTTGGAAGACACATTTATGGCACTCAACTAGATTGCATTGGATCAGCATTCAACGTAAAAGGTGCAATGCAATGCCCTAATTGTCGAAAGATTGAGAAAG GTCAATGGCTATATGCTAATGGCTGCCGATCATATCCAGAATTCAGCATGGATGACTGGACACATGATGAGGATGTTTATGATTTTAGCTACTCTGAAAT GTCCTTTGGAGTTCATTGGTGCCCTTTCAGTAACTTGACCCAGCTTCCTTCATCTTTCGAGGATGGGGAATTTT BLAST |
Tissue | pods |
Gene name | LI_gene_187455; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_295273
Blastp | E3 ubiquitin-protein ligase RFI2 from Arabidopsis with 67.9% of identity |
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Blastx | E3 ubiquitin-protein ligase RFI2 from Arabidopsis with 67.9% of identity |
Eggnog | zinc finger, C3HC4 type domain containing protein, expressed(ENOG410Y9QY) |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0001974) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418867.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |