Ll_transcript_294665

• Id Trinity: TRINITY_DN51767_c0_g1_i4
• Name Transcript: Ll_transcript_294665
• Sequence: CAAGAACATAAGCACGTGTCGACAAAGTGTGCAAACAACAATCCTTTCAATCCTCCAGCTCACTCACTTTCTTAATTAATCACTTTTTTATATTCTCTCT GTTTCTCTGGACCTTGGTCACCCACTCTACTCTCTCCCCCTCTTTTCACTAACTAATTATTATTAATTGATTACTTTACTTAATCACTTTTTTCCTGTTC TCTTTTCGCTCTTTTCTTCCATGCAATCTAGTATAAGAAAATCATTCAAATCCTATGCTTCATATAGTAATAAGCTTTCTAGAAGGTTCTCACTTACCGG AAACGCTGACTCATCCTCCTCCGATTCTGAAAATCTTCCTATCCTCCTCCATCAACAAAACAACCACCCTTATCCTCCGCCATCTATGGCGGCCGGAGGA GATTTTACTGTTAAGATTAACGACGCTGATCCCGCTCTTGTTTCTCCATCCATTTGGAGAGGATCCAGCTACGATTTCTGGAATGATGATGGCACTACTG ATGAACGAGAAAATGCGAATGAGGAGAGCTTCGATTTTCGGCATAAAGCTCAGTCGTTGTCGCCGGAGGAGGATCCACCGTCGAGGTTGATTGGGAAGTT TTTGCATAAGCAGAGAGCTTCTGGTGAGATTTTGTTGGATATGGATTTGGAAATGGACGAGTTGCAGCATGATTCCGTCGACGGGAACCTCACGCCGGTT GAAGAGTCGCCGACGGTGAACCAGTACCGTATCTCGAGGGATGTTAAGGTTTCGTTCGAGGAACCTGCTTCCAACGTGGTTGAGGTAGCAAATGATCACT TCGTTAGAAGAAGGAATAGCAAGGATTCGCCGTCGCTTGGAGATTTTCAACGGCCGCTGAAACATGATCGTCGTGGTGGATCTCCGTCTCCCAACGGTGA TGGTGAGGTTTTGAGGTGCACCTCAAATGCTTCATTTGAGAGGAGCCTTTCTGTGCAGAGAAAAAGTTCGTTATTGAAGGCAAAAACCCGGTCCAGATTG TTAGACCCGGTCGAAGAGCCCGAAAAGAAATCAGGTCGGGTACCGAGATCGAGTCAGATTTCATCCGGAAATGTGGGAAAGAAGGGTGGTGATGATGAAG AGGATGATCCTTTTTTTGAAGAGGATCTTCCAGAAGAGTATAAAAAGACTGGTTTCAGCTTTTGGATTTTGCTTGAATGGTTGAGCTTGATTTTGATAAT TGGTTTATTAATAACCACTCTTAGTATTCCTATTTTGAGGAACAAGAATCTGTGGCAGCTTAAGTTATGGAAATGGGAAGTAATGATTTTGGTTTTGATA TGTGGTAGGTTGGTTTCTGATTGGGTGATTAGAATAGCAGTGTTTTGTATTGAGAGGAATTTCCTTCTGAGGAAGAGAGTGTTGTATTTTGTGTATGGTG TGAAGAAACCAGTGCAGAATTGTGTGTGGTTGGGTCTTGTTTTGATTTCTTGGCACCTCCTGTTTGATAAGAGAGTTCAGAGGGAAACTAAAAGTTCCTT CCTTGATTATGTGACTAAGATTTTGGTGTGCTTCTTGGTGGGTACTCTGGTATGGTTGGTGAAAACTCTTCTGGTTAAGGTGCTTGCCTCTTCTTTCCAT GTTAGTACCTACTTTGATAGGATTCAGGAGTCACTGTTTAATCAGTTTGTGATTGAAACACTCTCGGGGCCGCCTTTGATTGAACTTCAAAAGGCTGAAG AAGAGGAACAGAAGCTTGCTGATGAGGTTCAGAAGCTGCAGAATGCTGGGGTTACCATTCCTCCTGGTCTTAAGGCAACTGCTTTCTCTACCATCAAGAC TGGAAAGTTGAGGAGTGGAGTGCTTCAGAGAAGCCCTAAGGTTTCCCACCCGCTTTCGAAGAAGTCAGATGATGGGAAGGGCGGGATAACTATTGATCAT CTGCATAAGCTGAACCCGAAAAATGTTTCTGCTTGGAATATGAAAAGGTTGATTAATATGGTCCGGCATGGGGCTCTTACTACATTGGATGAGCAGATAC TTGGGTCAACTAATGAGGATGAGAATGCCACACAGATTAGAAGTGAAAATGAGGCCAAAGCAGCAGCAAAGAAAATATTTCTGAATGTTGCCAGGCACGG TTGCAGGGTTATACGCCAGCTTGACTTGCTGCGTTTTATGCGACAAGATGAAGCTGAAAAAGCATTAAGTCTCTTTGAAGGAGCATCCGATAGTGGGATG ATCAGCAGACCAGCCTTGAAGAACTGGGTGGTCAATGCCTTCCGAGAGCGGAGAGCACTTGCTCTGACATTGAATGATACCAAAACGGCAGTGAACAAAC TTCATAGGATGCTCAATTTCTTAGTTATATTGATCATAGTGATTATTTGGCTCTTGATATTAGGAATCGCCACCACCAAATTTCTTCTCTTTCTGAGCTC ACAGGTTGTCTTGGTTGCATTCATATTTGGAAATACCTGCAAGACAATATTTGAATCAATTATTTTCTTGTTCGTCTTGCACCCATTTGACGTGGGAGAT AGATGTGAAATTGATGGGGTTCAGATGGTTGTAGAAGAGATGAACATATTAACAACCGTATTTCTGAGATACGACAATCAAAAGATTCTGATCCCTAACA GTGTCCTTGCTACAAAGGCCATCAATAACTTCTACCGTAGTCCTGATATGGGTGATGCTATTGAATTCTGTATACATGTATCTACCCCAATTGAAAAGAT TTCAGCTGTGAAACACAGAATACAAAGTTACATTGACAACAAGAAGGAGCATTGGTATGCTTCACCTCTCATTGTCTTCAAGGATTGTGAACAATTAAAC ATGATAAGATTGGCAATATGGCCAACACATAAAATGAATTTCCAAGACATGGGAGAAAGATTCTTGAGGAGATCCCTTTTGATCGAAGAGATGATCAAGA TTTTCCAGGAGCTTGACTTGCAGTACCGTCTCTTGCCACTTGATATTAGCATTAGAAGCATGCCTACCACTTCTGACCGGCTTCCACCTAGTTGGGCAAC AATCACTGGTTGAATATAAGAAGGGAAACCATGTAATTAATATCCCTGTGTTGTGCGGCATTATCTGCTAGAAAGTGATAGTTTTTAGCAGAGTAGGATT ATGGAAAGAAAGCTTTTTTGATACCATGGTAGATTAGTTTGGTACTAAGGCCTCTTTGATACATTACTTTCTCATGCAGTTTTGTTGAAATGACTAGTAT TGAGTAGTGTTTGGTTTTATGTCTTGCCAACATTTGGTAGATGATTAAAAGTAATCCTGGGGTTTCAGATCTAGTAACTTACTTAGACTTTATTCTCAAT AATTGCTTTTAATTTTTTCCAACTCCAGGTGATATTCTTGCTCAAATTCCTTCTGCCCTATATTGATGATATGTTTGTTGGTTAGTGTGTTGC
• Tissue: pods
• Gene name: LI_gene_187468;
• Additional information: details;

Expression of Ll_transcript_294665

FPKM

• PAB: 2.4
• PNAB: 6
• PS1: 1.8
• PS2: 4.1
• PS3: 2.3
• PW1: 6.8
• PW2: 7
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_294665

• Blastp: Mechanosensitive ion channel protein 6 from Arabidopsis with 58.31% of identity
• Blastx: Mechanosensitive ion channel protein 6 from Arabidopsis with 58.31% of identity
• Eggnog: Mechanosensitive ion channel(COG0668)
• Kegg: Link to kegg annotations (AT1G78610)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441706.1)
• Pfam: Mechanosensitive ion channel (PF00924.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;