| Id Trinity | TRINITY_DN51771_c0_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_296167 |
| Sequence | AAAAACTTTAAGCTAGTTTACATGTTGTATAATAAATTGATATTCAATGTTTATACGCACCAACGTTTTCACAATAAAATAATATATGAGTATACAGCAA TAGAAAGGGTAGAGTGTGAAGAAGTGAAGAGAATCTTGATCTTGAGTTTAGTACTAGCTTCCTTGTTCCTTGCTCATTCTGCATTCTCACTCTCATTTCT CATTGCTTCTTTTTCAAATCTACTTACTCTAACCAAACTCTACACTCTCTCTATATATACCTCAGTTTTTTTAACTTTATACTCTTCATTTTCATCTAAA GAGTTAGGAAGCAGTAATGGCAGGAGGAGCTCCAGCACCAAAAGCTGATGAACCACAGCCACATCCACCAAAAGATCAATTACCCAATGTTTCTTACTGC ATTACTAGTCCTCCTCCATGGCCTGAGGCCATACTTCTGGGTTTTCAACATTATCTTGTCATGCTTGGTACAACGGTGCTAATTCCAACTGCTCTTGTTC CCCAGATGGGAGGTGGCAATGAGGAGAAGGCGAAAGTGATCCAAACACTACTCTTTGTAGCTGGAATTAACACATTGTTGCAATCACTGTTTGGAACTCG ATTGCCTGCAGTAATTGGAGGGTCTTATACCTTTGTTCCGACGACAATCTCAATTATTCTTTCTGGTCGATTCAGTGATGAGGCAGATCCAATTGAGAAA TTCAAGAGGATAATGCGGGCAATCCAGGGAGCACTTATTGTTGCTTCAACTCTTCAAATAGTACTAGGCTTTAGTGGCTTATGGCGTAATGTTGCAAGGT TCTTAAGTCCACTTTCAGCAGTTCCTTTGGTGTCTCTTGTCGGTTTTGGGTTATATGAGTTAGGCTTCCCTGGGGTTGCTAAATGCGTAGAGATTGGACT GCCTGAGCTGATATTGCTGGTTTTTATTTCACAGTTCGTACCAAATGTGCTACATTCAGGAAAACATGTCTTTGACCGTTTTGCTGTTTTATTTACAATT GCAATTGTGTGGCTATATGCTTATATACTCACTGTTGGAGGGGCCTATAAGAATGCTGCACCTAAAACGCAGGCAACTTGCCGGACTGATCGTGCTGGCC TAATAGATGCTGCTCAATGGATATCTATCCCATATCCCTTCCAGTGGGGACCGCCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTT CGTTGCTCTTGTAGAGGTATTTTCTTTAGGTCCTCTCGATTTTTTTGAAATTGGTGCAAGAATTCGTTTTTGTTTATTTATTGTATTTTTCTTGCTATCC AATATTTATTCTATTAGCATCTATATTCATAGTCTCCGTGGATCTTCACGGAGTTTTATCAGTGCATTGCAGCTAGACATATAGTACAATAAATTATTCT TACTTTTCATGGCAATAATTGGCCTTTACTTAAAATCATGCTCTTTTTAAAATAAATTTTACAAGTCAAGTAGCTTAGCATAATGGATGAGGTCTTTCTA ATTTCATTTTTCAATTTTAAGTTCTTGCTCTAAAGTCAGGTTTTTGACCCAAAGAAAAGCTTCATCAGGAGCTTCAATTTTGTCGAAAAAGGCTGATTTT GTTTTCTTGAATGACAATGGTAAATTGGGAACCATATTGATAGTGCCAAGTTTAAATGCTTAATCTATAAGACTGCTTTATAAGAGAAATTTAGCACCAA GGTGAAAATGATTGCAAAAGAGAAAGACCAGATTAAATGAGAAATGTGATGTTCATTTATACGAACACAGCGGTTTCAAAACTCTATCCCTCTAGTGGAA AGACCTGGAACTCTCCCTTTGCTCTCTTTTCCAATACAACCTATAATCCCTCTCTTCCTGCAACTCACTTGTAATCACTAACTACTATCATCGTAACAGC GACTAACTGTTATTTCATATCATTTATCTCACTGTGATGTCTAGTAGATTATTACCTTTAATCATCATAAATTAGAATGGAGGCACTGGCTGGCATATTA TTGAATGACTTGAAGGATACTGAGATGTAACTGCTCTAAATGTGGGGATATCGGTCTACTTACTTTTCTATTATCAGCTAAATTCAGCCGATGTAGTAGT TATGATGGCTATTATTCATTTCACTTGAGGAAATATATAATAATATTAATATGTAATGGTACTGAAATCCAGTCTGCACATATTGGTGTTATTATGTGTA GGGCAACAGGTTCGGATCATTTAACTTTTACGGTTGTGCATTAGCTGCAAACTAGTTTTACAGTTGTCGCTTGACAATTTTTGATGAGTGATATTGCTTC ACTAGAATTAAAGTAGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_187495; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_296167
| Blastp | Nucleobase-ascorbate transporter 6 from Arabidopsis with 83.61% of identity |
|---|---|
| Blastx | Nucleobase-ascorbate transporter 6 from Arabidopsis with 83.61% of identity |
| Eggnog | permease(COG2233) |
| Kegg | Link to kegg annotations (AT5G62890) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456719.1) |
| Pfam | Permease family (PF00860.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |