Ll_transcript_295976

• Id Trinity: TRINITY_DN51773_c0_g1_i10
• Name Transcript: Ll_transcript_295976
• Sequence: TTATTAAGTTAATTTTGAAAATAGAAATTCACAAGAAAAAAAATAAAATAAAATTACTATTGGCGGGACGGGACATATTTCCTTTCAACCAACAAGAGAC GGCGGGAGTAACATTTGCTTTCACAAATTGAACCCTCAAACAAGAATTGAGAAGTGAAGATAATCCAAAACGACACCGTTCCTCCGTTGTTTTCGAGATG GACTCTGAACTGAAGGCGGCGAGATCCGCCTACCGGAACGCCAAGGCGGATGGCAACCACCGCGAGGAGGCGCGTTGGGCGAACGTCATAAGCGATATTC TAAAAAACAAAGGAGAATATTTTGAATCCCTTAAATGGCTTCGAATCGATTACGAAGTGTCGCTAAAGTACTTGCCCGAGAAAGACTTGCTTCCAACTTG CCAATCCCTCGGAGAAATCTACCTCCGTCTCGAACAATTCTCCGATGCACTCATTTATCAGAAAAAGCATTTAGATCTAGCGAGGGAAGCTAACGACATT GTGGAGCAGCAGAGAGCGAGCACACAACTCGGTCGAACATATTATGAATTGTTTTCGAGATCAGAACATGATCATCACTCGATTCGTAATGCGAAGAAGT ATTTCAATTGTGCGATGGAGCTGGCGGTTACTCTGAAGCAGAATCCGCCGAATAACAAGTCTTCGTTCCTCAAGGAATACATTGATGCACATAACAATAT AGGAATGCTGGAAATGGAGCTTGATAATTTGGATGAGGCGAAGAAGATATTAAATCGTGGACTAGAGATTTGTGATGAAGAGGAGATTAGTGAATTTGAT GATGGGAGAAGTAGGCTTCATCATAACCTTGGGAATGTGTATATGGAACTTAGGATTTGGGATCATGCTAGAAAGCATATCAGAAGGGATATTATAATTT GTAACAGGATTGGACATTGCCAAGGGGAAGCGAAGGGGTATATTAACCTTGGTGAGGTGCATTATAGGACTCAGAAGTATGAGGATGCAAGGTCTTCTTA CGAAAGGGCGCTTGCTTTGGCCAAGTCGCTGGAGGACGAAGACGGTTTGGTTAGGCAAATTGACCGGAATATTGAAATTGTGAAAGAAGCCACGAAAGTG ATGGCTGAAATAAAGAAAGGAGAGCAGAACCTTAAGAAGCTGAGAAGAGATGCAGCAAATGCAAGAGAGACACCACATGAGAGGAAATGCTTGCTGCAGA CAATTAAGTCTCTTGATGACCTCATTGATAAATCAAGATCGATCTCTGTGTGGGAGAAGCAATGTGAATTTGCAAAGGAGAAGAAGAAAATAGCAAGTGA ACTCTGTGACAGCCTAAAGCTGGCTGATTCATATCTGGATGTTGGAGAATCATATCAGAAGCTCAGAAAATTCAACAAAGCAATCAAATGGTATAAAAAA AGTTGGGAAACGTACAAAACAATTCGTTACTTGGAGGGGCAAGCACTAGTGAAAATTAATATTGGTAATGTGTTGGATTCTACCCATGATTGGAGAGGAG CATTAGCTGCTTTTCAAGAGAGCTACAGTATTGCTGTTGAAGCTGACCTCCCTGATGTACAGCTTATGGCCTTGGAAAATATGCATTATAGCAACATGGT ACGATTTGATGACGAGGATGAGACAAGGACGTTGAAACTTCTAATTGATAAGCTGAGTAAGTCAACAGAAAAATATGCAGAAGCTAAAAACATAGCAGAC GATTGTTGCTCTGAGACCGATACTGAAGCAGATGATAACCTATCAAACAGTGGGTCTGACAATGTCTGCTCTCGCAAGACAATTTCCAGATCAAAAACTT TGGCTACTGGAGAAGTATTGAAAGATGACACGCCTCTTATGTCACTCTATCAGTCCATAAAAGGCTCATCCAGGAAGATAACAGGCCATGTGGAAAAAAT TGCCAACTCTACCAAGCAAGCAGATCAGTCACCCAATCTAACCAGCAATCATCAGACATCCATTGGTCGTAAACGTGTCCGTGTAATTCTTTCTGATGAC GATGATGATGAGATGGTGAGTTCAAGCAGAAAGGATCATCGTTGCATGTTTGAGGATTTGTCAACTGATGATGCAATTAAGGGGAAATCCAGTCCTTCTC ATAATATTCAGATGGTCTCAGAGTACGGATCTAAACATGTACATAATGTTGAAGAAAGTAGTAGTTCTTTCAAATGCTGGAGTCCGCATAGGGTCACTAG ACCTGGCAGACATTCTCAATCTTTGAGCAATGATATAGTTACCGAACCAGATTTTCCTAGTTGTTCAAAATGTGACACAGATGTCTCTGGCAAACAAAAT GTTGATGCCCATCCCATGATGAAAAATTCCCAGAATGATTTGCAGCAATATATTACATGCTGGATTGGGAATGATCCAATTCACATAGAAGAATCCATGT GTACTGCCAATGATCAGTTGAACATTGAGTTTTTGAAGGCTGCCATTGCATGCTCATACTATCTACAACTTCCCACAGAAAAGAGATCAGAGGGTTTGTT GCCCATTGTTCAGTACATAAAATGTGCTGGAAGAGATTTAGAATCCATGGAAACTGTTGAAAGTGTTAAGGAACACCTGAGAAATGACACAATTGAAGCT TCCATTGATGGGTGGATTCACAAGCGCCTAGTCAAAATGTACACCGATTGCTGCAAAGAGTTGTCTGAGATGCCTAATATGAAAGTACTGAAGAAACTTT ATAATTTAGAGGTTTCAGATGATGAAATTGTTGTGTCTGAGTGTGATCTGCATGATTTGTCTATAACTCCATTGATAAACGCACTGCATTCCCATCAAGC ATTTGCAATGCTTGATCTCTCTCACAATTTGTTAGGAAATGGGACAATGGAGAAACTTCAAAAGGTATTCACAGCATCAGGCCAATCTTATTGTGACTTG ACTCTGGATTTGCATTGCAATCGATTTGGCCCAACTGCTTTGTTTCAGATTTGTGAATGTCCAGTCCTATTTGCTCGACTAGAAGTGCTTAACATTTCTG GAAACCGACTTACTGATGCATGTGGGTCTTATCTTTCAACTATCTTAAAAAGATGTACAGCCCTCTGCAGCTTGAATGTAGAGAATTGTTGTATCACATC AAAAACTATTCAAAAGATTGCTGATGCATTGGACTCTAGATCTGTACTTACACATCTTTGTATAGGAAATAACAGCCCTGTATCTGGAAATGCTATAGTT AATCTTCTGTCCAAGCTGTCTACTTTGGAAAGGTTTTCTGAGCTGAATCTGCATGGTCTAAAACTAGGCAAACCAGTCATTGGTGCCCTTTGCCAGCTTG CAGAGAGCTTGACTTTATCAGGATTAATACTCGGAGGCACGGGTATTGGAACTAGGCATTATTTTGCAGGAAGGAGTGATGCAATTAGCAAAATCATTGC TCAAAGGAACAGAAGAGCTTGTGAAGCTTGATCTATCATATTGTGGGCTAACATCTAACTTTGCTTTAAATATCAGTGTCAATTTATTTTGGTCCATCCT AGAGCTGAACCTGGAAGGAAATCCTATTATGCGCGAGGGCAGCAATACTCTATTTTCTCTTCTCATGAACCCACAGTGCTGTCTTAAAGTTTTGGTCCTT AGAAAGTGTCAACTTGGGCTCACTGGGGCTCTTCACATAATTGAGGCACTGGCAGAAAACTGCTGCCTGGAGGAGCTTAATCTTGCTGCTAATTCTGTTC CAAATGAACTTACTGCTCTACAATGCCATACATCAGTGCAAGGATGCTCACTAAAGCAAGAGCAAAAGGCTGATACTCTGAAAGTGGATGAAAATCAAGA GTTCCTTTACTCTGACTACGATCAGCTCGAAGTTGCTGATAGTGAAGAATTACCTGTCAGAGTAGAAGCTGCTGCTTCAGGAATCGATGACAGCTGCGCC AGTTCATATAAAAAAAATTCTTCATCCCCCGAGTGCCATTTCACACAACAGTTCTCCGTTGCTATCGCCAAAGCAAAGAACTTGCAATTACTGGACCTTA GTGATAATGATTTTTCTGCACAAGCTGCAGAAACGTTCTACAGTTCATGGACAACTTTAAGACCACTTTCAAGTCAGAAGCACATTACCAAATGTATCAT TCATTTCTCAACGAAGGAAAATAAGTGCTGCAGAGTAAAACCATGCTGCAAGAAAGTTTGATTTTGTTGCTCCCATCCAATGTCACTGTCCTGATGAAAG CATAAAAGCCAAATCTCCACCAACGATTGAGTTGCAGTTATATGAATAAGAGACATTGTTTTTTTTATTAATTTTTTCATCGTTAACAGCTATAATTTGT AGATGCAAGTTGTAAGTAAGACACGAGTACTCTTGCCTCATTTATCATGTAAAGTAAAAGACTTTTATGAAACACATTCATCCTACTTTCATGTATATAT AATAGTATGTACAGATTAACCAGCCTTACTAACTTGTTGGTAGATATAGTTGTAGTTGTAGTTGTGC
• Tissue: pods
• Gene name: LI_gene_187501;
• Additional information: details;

Expression of Ll_transcript_295976

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.3
• PS2: 0
• PS3: 0.4
• PW1: 0.2
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_295976

• Blastp: Protein TONSOKU from Arabidopsis with 51.61% of identity
• Blastx: Protein TONSOKU from Arabidopsis with 51.44% of identity
• Eggnog: repeat-containing protein(COG0457)
• Kegg: Link to kegg annotations (AT3G18730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462892.1)
• Pfam: Tetratricopeptide repeat (PF13181.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;