Ll_transcript_295968

• Id Trinity: TRINITY_DN51773_c0_g1_i2
• Name Transcript: Ll_transcript_295968
• Sequence: GGGAAAGAGAAAATTCATTTCAATCAGCGGCAACAGACGGCGCGAGTAACACTTGCTTTCACAAACCGAACCTCAGAGAAACCACAACGACACCGTTCCA CCGTCGTTTCGATATGGATTCGGAACTGAAGGCGGCGAGATCCGCTTACCGGAACGCAAAGGCGGAGGAGAACCACCGCGAGGAGGCGCGTTGGGCGAAC GTCATTAGCGATATTCTAAAAAACAGAGGAGAATATTTTGAATCCCTCAAATGGCTTCGAATCGATTACGAAGTTTCGCGCAAACACTTGCCTGAGAAAG ACTTGCTTTCAACTTGTCAATCCCTCGGAGAAATCTACCTCCGACTCGAACGATTCTCCGATGCCCTAACTTATCAGAAAAAGCATTTAGATCTAGCGAG GGATGCTAACGACCTAGTGGAGCAGCAGAGAGCGAGCACGCAACTCGGTCGCACATATTACGAATTGTTTTCGAGATCGGAACATGATCATCACTCAGTT CGAAATGCGAAAAAGTATTTCAAGTGGGCAATGGAGCTTGCGGTTACTCTCAAGGAGAATCCACCGAATAACAAGTCTTCTTTCCTTAAGGAATACATTG ATGCACACAACAATATTGGAATGCTGGAAATGGAGCTTGATAATTTGGGTGAGGCGAAGAAGATCTTAACTCGTGGACTTCAGATTTGTGAGGAAGAGGA GATTAATGAACTCGATGATGGTCGAAGCAGGCTTCACCATAACCTTGGGAATGTGTATATGGAACTTAGGGCTTGGGATCATGCTAAAAAGCATATTGGG AAGGATATTAGGATTTGTAACTGGATTGGACATCGCCAAGGGGAAGCGAAGGGGTATATTAATCTCGGTGAGGTGCATTATAGGACTCAGAAGTATGAGG ATGCTAAGTCTTCTTACGAAAGGGCGCTTGCTTTGGCCAAGTCGCTGGAGGACGAGGATGGTTTGGTCAGGCAAATTGAGCGGAATATTGGAATTGTTAT TGAAGCCGTGAAAGTGATGAGTGAAATAAAGAAAGAAGAGCAGAACCTTAAGAAGCTTAGAAGACACGCAACAAATGCAAGAGGGACGCCACATGAGAGG AAATGTCTCCTGCTGATGACCAAGTCTCTTGATGGTCTCATTGACAAATCAATGACTATCCTTGCATGGGAGAAGCAATGTGAATTTGCAAAGGAGAAGA AGAAAACAGCAAGTGAACTTTGTGACAGGCAAAAGCTGGCTGATTCATATCTGGATGTTGGAGAATCATACCAGAAGCTTAGAAAATTCAACAAAGCAAT CAAATGGTATAAAAAAAGTTGGGAAACATACAAAACAATTCATTACTTGGAGGGGCAAGCACGAGTGAAAATTAATATTGGTAATGTGTTGGATTCTACC CATGATTGGAGAGGAGCCTTAGATGCATTCCAACAGAGTTACAGTATTGCTGTTGAAGCTGACCTTCCCGATGTACAGCTTATGGCCTTGGAAAATATGC ATTATAGCAACATGGTACGATTTGACGATGAGGGTGAGACAAGGAGGTTGAAACTTCTAATTGATAAACTGAACAAGTCAACAGAAAATGAGCCAGAAGC TAAAAATATGCCAGAGGAGTGTTGCTCTGAGACTGATACTGAAGCAGATGTTAATCTCTCAAACAGTGGGTCCGACAATTTATGCTCGCGTAAAACAAAT TCAAGATCAAAAACTGTGACTACTGGAGAAGAATTGAAAGATGACGTACCTCTTATGTCTCTCTATCAGTCCATAAAAGGCTCATCCAGAGAGATAACAG GCCACATGGAAAGTTTTACCCCCTCTACCAAGCAAGTGGAGCTGTCACCTAAAAGTCTGAGAAATCTAACCAGACATCAGCAGACAGTTGTTGGTCGTAA ACGTGTCCGTGTAATTCTTTCTGACGATGATAACGATGATGCGATGGAGTGTTCAGGCATAAATGATCAACACTGCCTGTTTGAGGACTTGTTAACTGAT GATGCAATTAAGAATAAAGTCAGTCCTTCTTATAATATTCAGATGGTCTCAGAGTATGGATCCAAATGTGCAAGTAATGTTGAAGAAAGTAGTAGTTCTT TCAAATGCTGCAGTCCACATAGAGCAACTAGACCTGGTAGACATTCCCTATCTTTGAGCAATGATAAAGTTGCTGAACCTTACGTTCTTAGTGGTTCAAA ATGTGATACAGATGACTCTGGCAAACAAAATGTTGATGTCCATCTCAAGGTGAAAAATTCCCAGAAAGATTTGCAGCAATATATTACATGTCGGATCGGA AATGATGTATTTGACATTGAAGAATCCCTGTGCATTGCTGAAGATCATTTGAATATTGAATCTTTGAAGGCTATAGCGGCATGCTCATACTATTTACAGC TTCCTACAGAAAAGAGATCAGAAGGTTTGTTGCCCATTGTTCAGCACATAAAATGTGCTGGAAGAGATTTACAATCTATGGAAACTGTTGAAAATATTAA GGAGCACCTGGGAAATGACACGGTTGAAGCTTCCATTGATGGGTGGATTCACAAGCGCCTAATAAAAATGTATGTAGACTGCTGTAAGGAGTTGTCCGAG GTACCTAATATGAAGGTACTGAAGAAACTTTACAACTTAGAGGTTTCAGATGACGAAATCGTTGTCTCCGAGTGTGATCTGCAAGATCTGTCTGTAACCC CCTTGATAAATGCACTGCATTTCCATCAAGCATTTACAATGCTTAACCTCTCTCACAATTTGTTAGGAAATGGGTCAATGGAGAAGCTTCAAAAGGTGTT CACAGCACCAGCCCAATCTTATTGTGACTTAACTCTGGATTTGCATTGCAACCGATTTGGCCCAACAGCTTTGTTTCAGATTTGTGAATGCCCAGTGCTA TTTGCTCGACTAGAAGTGCTTAACATTTCTGGAAACCGTCTCACTGATGCATGTGGATCTTATCTTTCAACAATCATAAAAAGATGTAGAGCCCTCTGTA GCTTGAATGTAGAGAATTGCTGTATAACATCACGAACTATTCAAAAGATTGCTGATGCATTGGACTCTAGATCTGTACTTACACATCTCTGCATAGGACA TAACACCGCCGTAACTGGAAATGCTATAGTTAATCTTCTGTCCAAGCTTTCTACTTTGAAAAGGTTTTCTGAGCTGAACCTGCATGGTCTAAAACTAGGC AAGCCAGTCATTGACGCCCTCTGCCAGCTAGCAGAGAGCTTGACTTTATCAGGATTAATACTAGGAGGCACGGGTATCGGAACAGAAGGAGCAATGCAAT TAACCAAATCTTTGTATAAAGAAACAGAAGAGCTTGGGAAACTTGATCTATCATATTGTGGGCTAGCATCTGACTTTGCTTTAAACATCAATGCTAATTT ATTTTTGTCCATCCTAGAGCTGAACCTGGAAGGAAATCCTATCAGGAGTGAGGGCAGCAATACTATATCTTCTCTTCTCATGAACCCACAGTGCTGTATC AAAGTTTTGGTCCTTAGAAAGTGTAAACTTGGGCTGGCTGGAGTTCTTCACATAGTTGAGACACTGGCAGAAAACAGCTGCTTGGAGGAGCTTAATCTTG CTGATAATTCTGTTCCAAATGACCTTGCTACTCTACAATATGACTTATCAATTAAAGGATGCTCACAAAAGCAGGAGCCAAAAGCTGATAATACGAAAGT GGATGATAATCAAGAGGCCCTTTACACTGATTACCATCAGCTTGAAGTTGCTGACAGTGAAGAATTACCAGCAAGAGTAGAAGCTATTGCTTCTGGAGTC GAAGACGGCTGTGCCAGCTCATGTCAAAGAAATTCTCCATCTCCTGAGTGCCATTTCACTCACCAGTTTTCAATTGCTATTGGTAAGGCAAAGAACTTAC AATTACTTGACCTTAGCGATAATGATTTTTCTGCACAGGCTGTAGAAACATTCTACAGTTCATGGACAACTTTACGACAGGTTACAAGTCAGAAGCACAT TACTCAGCACATTATTCATTTCTCAACCAAGGAAAATAAGTGCTGTGGAGTAAAACCGTGCTGCAAGAAAGTTTAATTTTGTTGCTCCCATCCGATGTCA CGGTCCTGACGAAAGAATAAAAGTCAAATCCCAACCTATGATTGATAATGGCAGTTCTATGAACAAGACATTGTTTATTTATGAATTGTTCATGGTTGAT GGCTGGAAATTCTGTATGTCATGTAAGGAATGGACGGGTGTTCTTGCTTCACCTATCATGTAAAAGACTTTTATGAAACACATTTGTCCTTATTCCACGC ATATAGTAGTATGCACAGATTGACCACCCTTAAGAACTTGTTGGTAATCGTATAGTTTTGTGCATCATGCAAAGCTATGTAACGCTAAGCTATGTATTGA ATAGAATAATAGG
• Tissue: pods
• Gene name: LI_gene_187501;
• Additional information: details;

Expression of Ll_transcript_295968

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.5
• PS2: 0.1
• PS3: 0
• PW1: 0.3
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_295968

• Blastp: Protein TONSOKU from Arabidopsis with 48.94% of identity
• Blastx: Protein TONSOKU from Arabidopsis with 48.93% of identity
• Eggnog: repeat-containing protein(COG0457)
• Kegg: Link to kegg annotations (AT3G18730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459015.1)
• Pfam: Tetratricopeptide repeat (PF13424.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;