Ll_transcript_295970

• Id Trinity: TRINITY_DN51773_c0_g1_i4
• Name Transcript: Ll_transcript_295970
• Sequence: GGGAAAGAGAAAATTCATTTCAATCAGCGGCAACAGACGGCGCGAGTAACACTTGCTTTCACAAACCGAACCTCAGAGAAACCACAACGACACCGTTCCA CCGTCGTTTCGATATGGATTCGGAACTGAAGGCGGCGAGATCCGCTTACCGGAACGCAAAGGCGGAGGAGAACCACCGCGAGGAGGCGCGTTGGGCGAAC GTCATTAGCGATATTCTAAAAAACAGAGGAGAATATTTTGAATCCCTCAAATGGCTTCGAATCGATTACGAAGTTTCGCGCAAACACTTGCCTGAGAAAG ACTTGCTTTCAACTTGTCAATCCCTCGGAGAAATCTACCTCCGACTCGAACGATTCTCCGATGCCCTAACTTATCAGAAAAAGCATTTAGATCTAGCGAG GGATGCTAACGACCTAGTGGAGCAGCAGAGAGCGAGCACGCAACTCGGTCGCACATATTACGAATTGTTTTCGAGATCGGAACATGATCATCACTCAGTT CGAAATGCGAAAAAGTATTTCAAGTGGGCAATGGAGCTTGCGGTTACTCTCAAGGAGAATCCACCGAATAACAAGTCTTCTTTCCTTAAGGAATACATTG ATGCACACAACAATATTGGAATGCTGGAAATGGAGCTTGATAATTTGGGTGAGGCGAAGAAGATCTTAACTCGTGGACTTCAGATTTGTGAGGAAGAGGA GATTAATGAACTCGATGATGGTCGAAGCAGGCTTCACCATAACCTTGGGAATGTGTATATGGAACTTAGGGCTTGGGATCATGCTAAAAAGCATATTGGG AAGGATATTAGGATTTGTAACTGGATTGGACATCGCCAAGGGGAAGCGAAGGGGTATATTAATCTCGGTGAGGTGCATTATAGGACTCAGAAGTATGAGG ATGCTAAGTCTTCTTACGAAAGGGCGCTTGCTTTGGCCAAGTCGCTGGAGGACGAGGATGGTTTGGTCAGGCAAATTGAGCGGAATATTGGAATTGTTAT TGAAGCCGTGAAAGTGATGAGTGAAATAAAGAAAGAAGAGCAGAACCTTAAGAAGCTTAGAAGACACGCAACAAATGCAAGAGGGACGCCACATGAGAGG AAATGTCTCCTGCTGATGACCAAGTCTCTTGATGGTCTCATTGACAAATCAATGACTATCCTTGCATGGGAGAAGCAATGTGAATTTGCAAAGGAGAAGA AGAAAACAGCAAGTGAACTTTGTGACAGGCAAAAGCTGGCTGATTCATATCTGGATGTTGGAGAATCATACCAGAAGCTTAGAAAATTCAACAAAGCAAT CAAATGGTATAAAAAAAGTTGGGAAACATACAAAACAATTCATTACTTGGAGGGGCAAGCACGAGTGAAAATTAATATTGGTAATGTGTTGGATTCTACC CATGATTGGAGAGGAGCCTTAGATGCATTCCAACAGAGTTACAGTATTGCTGTTGAAGCTGACCTTCCCGATGTACAGCTTATGGCCTTGGAAAATATGC ATTATAGCAACATGGTACGATTTGACGATGAGGGTGAGACAAGGAGGTTGAAACTTCTAATTGATAAACTGAACAAGTCAACAGAAAATGAGCCAGAAGC TAAAAATATGCCAGAGGAGTGTTGCTCTGAGACTGATACTGAAGCAGATGTTAATCTCTCAAACAGTGGGTCCGACAATTTATGCTCGCGTAAAACAAAT TCAAGATCAAAAACTGTGACTACTGGAGAAGAATTGAAAGATGACGTACCTCTTATGTCTCTCTATCAGTCCATAAAAGGCTCATCCAGAGAGATAACAG GCCACATGGAAAGTTTTACCCCCTCTACCAAGCAAGTGGAGCTGTCACCTAAAAGTCTGAGAAATCTAACCAGACATCAGCAGACAGTTGTTGGTCGTAA ACGTGTCCGTGTAATTCTTTCTGACGATGATAACGATGATGCGATGGAGTGTTCAGGCATAAATGATCAACACTGCCTGTTTGAGGACTTGTTAACTGAT GATGCAATTAAGAATAAAGTCAGTCCTTCTTATAATATTCAGATGGTCTCAGAGTATGGATCCAAATGTGCAAGTAATGTTGAAGAAAGTAGTAGTTCTT TCAAATGCTGCAGTCCACATAGAGCAACTAGACCTGGTAGACATTCCCTATCTTTGAGCAATGATAAAGTTGCTGAACCTTACGTTCTTAGTGGTTCAAA ATGTGATACAGATGACTCTGGCAAACAAAATGTTGATGTCCATCTCAAGTTGCAGCAATATATTACATGTCGGATCGGAAATGATGTATTTGACATTGAA GAATCCCTGTGCATTGCTGAAGATCATTTGAATATTGAATCTTTGAAGGCTATAGCGGCATGCTCATACTATTTACAGCTTCCTACAGAAAAGAGATCAG AAGGTTTGTTGCCCATTGTTCAGCACATAAAATGTGCTGGAAGAGATTTACAATCTATGGAAACTGTTGAAAATATTAAGGAGCACCTGGGAAATGACAC GGTTGAAGCTTCCATTGATGGGTGGATTCACAAGCGCCTAATAAAAATGTATGTAGACTGCTGTAAGGAGTTGTCCGAGGTACCTAATATGAAGGTACTG AAGAAACTTTACAACTTAGAGGTTTCAGATGACGAAATCGTTGTCTCCGAGTGTGATCTGCAAGATCTGTCTGTAACCCCCTTGATAAATGCACTGCATT TCCATCAAGCATTTACAATGCTTAACCTCTCTCACAATTTGTTAGGAAATGGGTCAATGGAGAAGCTTCAAAAGGTGTTCACAGCACCAGCCCAATCTTA TTGTGACTTAACTCTGGATTTGCATTGCAACCGATTTGGCCCAACAGCTTTGTTTCAGATTTGTGAATGCCCAGTGCTATTTGCTCGACTAGAAGTGCTT AACATTTCTGGAAACCGTCTCACTGATGCATGTGGATCTTATCTTTCAACAATCATAAAAAGATGTAGAGCCCTCTGTAGCTTGAATGTAGAGAATTGCT GTATAACATCACGAACTATTCAAAAGATTGCTGATGCATTGGACTCTAGATCTGTACTTACACATCTCTGCATAGGACATAACACCGCCGTAACTGGAAA TGCTATAGTTAATCTTCTGTCCAAGCTTTCTACTTTGAAAAGGTTTTCTGAGCTGAACCTGCATGGTCTAAAACTAGGCAAGCCAGTCATTGACGCCCTC TGCCAGCTAGCAGAGAGCTTGACTTTATCAGGATTAATACTAGGAGGCACGGGTATCGGAACAGAAGGAGCAATGCAATTAACCAAATCTTTGTATAAAG AAACAGAAGAGCTTGGGAAACTTGATCTATCATATTGTGGGCTAGCATCTGACTTTGCTTTAAACATCAATGCTAATTTATTTTTGTCCATCCTAGAGCT GAACCTGGAAGGAAATCCTATCAGGAGTGAGGGCAGCAATACTATATCTTCTCTTCTCATGAACCCACAGTGCTGTATCAAAGTTTTGGTCCTTAGAAAG TGTAAACTTGGGCTGGCTGGAGTTCTTCACATAGTTGAGACACTGGCAGAAAACAGCTGCTTGGAGGAGCTTAATCTTGCTGATAATTCTGTTCCAAATG ACCTTGCTACTCTACAATATGACTTATCAATTAAAGGATGCTCACAAAAGCAGGAGCCAAAAGCTGATAATACGAAAGTGGATGATAATCAAGAGGCCCT TTACACTGATTACCATCAGCTTGAAGTTGCTGACAGTGAAGAATTACCAGCAAGAGTAGAAGCTATTGCTTCTGGAGTCGAAGACGGCTGTGCCAGCTCA TGTCAAAGAAATTCTCCATCTCCTGAGTGCCATTTCACTCACCAGTTTTCAATTGCTATTGGTAAGGCAAAGAACTTACAATTACTTGACCTTAGCGATA ATGATTTTTCTGCACAGGCTGTAGAAACATTCTACAGTTCATGGACAACTTTACGACAGGTTACAAGTCAGAAGCACATTACTCAGCACATTATTCATTT CTCAACCAAGGAAAATAAGTGCTGTGGAGTAAAACCGTGCTGCAAGAAAGTTTAATTTTGTTGCTCCCATCCGATGTCACGGTCCTGACGAAAGAATAAA AGTCAAATCCCAACCTATGATTGATAATGGCAGTTCTATGAACAAGACATTGTTTATTTATGAATTGTTCATGGTTGATGGCTGGAAATTCTGTATGTCA TGTAAGGAATGGACGGGTGTTCTTGCTTCACCTATCATGTAAAAGACTTTTATGAAACACATTTGTCCTTATTCCACGCATATAGTAGTATGCACAGATT GACCACCCTTAAGAACTTGTTGGTAATCGTATAGTTTTGTGCATCATGCAAAGCTATGTAACGCTAAGCTATGTATTGAATAGAATAATAGG
• Tissue: pods
• Gene name: LI_gene_187501;
• Additional information: details;

Expression of Ll_transcript_295970

FPKM

• PAB: 0.2
• PNAB: 2.4
• PS1: 1.6
• PS2: 1
• PS3: 1.3
• PW1: 0.7
• PW2: 0.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_295970

• Blastp: Protein TONSOKU from Arabidopsis with 49.01% of identity
• Blastx: Protein TONSOKU from Arabidopsis with 48.85% of identity
• Eggnog: repeat-containing protein(COG0457)
• Kegg: Link to kegg annotations (AT3G18730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459015.1)
• Pfam: Tetratricopeptide repeat (PF13424.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;