Ll_transcript_295971

• Id Trinity: TRINITY_DN51773_c0_g1_i5
• Name Transcript: Ll_transcript_295971
• Sequence: TTATTAAGTTAATTTTGAAAATAGAAATTCACAAGAAAAAAAATAAAATAAAATTACTATTGGCGGGACGGGACATATTTCCTTTCAACCAACAAGAGAC GGCGGGAGTAACATTTGCTTTCACAAATTGAACCCTCAAACAAGAATTGAGAAGTGAAGATAATCCAAAACGACACCGTTCCTCCGTTGTTTTCGAGATG GACTCTGAACTGAAGGCGGCGAGATCCGCCTACCGGAACGCCAAGGCGGATGGCAACCACCGCGAGGAGGCGCGTTGGGCGAACGTCATAAGCGATATTC TAAAAAACAAAGGAGAATATTTTGAATCCCTTAAATGGCTTCGAATCGATTACGAAGTGTCGCTAAAGTACTTGCCCGAGAAAGACTTGCTTCCAACTTG CCAATCCCTCGGAGAAATCTACCTCCGTCTCGAACAATTCTCCGATGCACTCATTTATCAGAAAAAGCATTTAGATCTAGCGAGGGAAGCTAACGACATT GTGGAGCAGCAGAGAGCGAGCACACAACTCGGTCGAACATATTATGAATTGTTTTCGAGATCAGAACATGATCATCACTCGATTCGTAATGCGAAGAAGT ATTTCAATTGTGCGATGGAGCTGGCGGTTACTCTGAAGCAGAATCCGCCGAATAACAAGTCTTCGTTCCTCAAGGAATACATTGATGCACATAACAATAT AGGAATGCTGGAAATGGAGCTTGATAATTTGGATGAGGCGAAGAAGATATTAAATCGTGGACTAGAGATTTGTGATGAAGAGGAGATTAGTGAATTTGAT GATGGGAGAAGTAGGCTTCATCATAACCTTGGGAATGTGTATATGGAACTTAGGATTTGGGATCATGCTAGAAAGCATATCAGAAGGGATATTATAATTT GTAACAGGATTGGACATTGCCAAGGGGAAGCGAAGGGGTATATTAACCTTGGTGAGGTGCATTATAGGACTCAGAAGTATGAGGATGCAAGGTCTTCTTA CGAAAGGGCGCTTGCTTTGGCCAAGTCGCTGGAGGACGAAGACGGTTTGGTTAGGCAAATTGACCGGAATATTGAAATTGTGAAAGAAGCCACGAAAGTG ATGGCTGAAATAAAGAAAGGAGAGCAGAACCTTAAGAAGCTGAGAAGAGATGCAGCAAATGCAAGAGAGACACCACATGAGAGGAAATGCTTGCTGCAGA CAATTAAGTCTCTTGATGACCTCATTGATAAATCAAGATCGATCTCTGTGTGGGAGAAGCAATGTGAATTTGCAAAGGAGAAGAAGAAAATAGCAAGTGA ACTCTGTGACAGCCTAAAGCTGGCTGATTCATATCTGGATGTTGGAGAATCATATCAGAAGCTCAGAAAATTCAACAAAGCAATCAAATGGTATAAAAAA AGTTGGGAAACGTACAAAACAATTCGTTACTTGGAGGGGCAAGCACTAGTGAAAATTAATATTGGTAATGTGTTGGATTCTACCCATGATTGGAGAGGAG CATTAGCTGCTTTTCAAGAGAGCTACAGTATTGCTGTTGAAGCTGACCTCCCTGATGTACAGCTTATGGCCTTGGAAAATATGCATTATAGCAACATGGT ACGATTTGATGACGAGGATGAGACAAGGACGTTGAAACTTCTAATTGATAAGCTGAGTAAGTCAACAGAAAAATATGCAGAAGCTAAAAACATAGCAGAC GATTGTTGCTCTGAGACCGATACTGAAGCAGATGATAACCTATCAAACAGTGGGTCTGACAATGTCTGCTCTCGCAAGACAATTTCCAGATCAAAAACTT TGGCTACTGGAGAAGTATTGAAAGATGACACGCCTCTTATGTCACTCTATCAGTCCATAAAAGGCTCATCCAGGAAGATAACAGGCCATGTGGAAAAAAT TGCCAACTCTACCAAGCAAGCAGATCAGTCACCCAATCTAACCAGCAATCATCAGACATCCATTGGTCGTAAACGTGTCCGTGTAATTCTTTCTGATGAC GATGATGATGAGATGGTGAGTTCAAGCAGAAAGGATCATCGTTGCATGTTTGAGGATTTGTCAACTGATGATGCAATTAAGGGGAAATCCAGTCCTTCTC ATAATATTCAGATGGTCTCAGAGTACGGATCTAAACATGTACATAATGTTGAAGAAAGTAGTAGTTCTTTCAAATGCTGGAGTCCGCATAGGGTCACTAG ACCTGGCAGACATTCTCAATCTTTGAGCAATGATATAGTTACCGAACCAGATTTTCCTAGTTGTTCAAAATGTGACACAGATGTCTCTGGCAAACAAAAT GTTGATGCCCATCCCATGATGAAAAATTCCCAGAATGATTTGCAGCAATATATTACATGCTGGATTGGGAATGATCCAATTCACATAGAAGAATCCATGT GTACTGCCAATGATCAGTTGAACATTGAGTTTTTGAAGGCTGCCATTGCATGCTCATACTATCTACAACTTCCCACAGAAAAGAGATCAGAGGGTTTGTT GCCCATTGTTCAGTACATAAAATGTGCTGGAAGAGATTTAGAATCCATGGAAACTGTTGAAAGTGTTAAGGAACACCTGAGAAATGACACAATTGAAGCT TCCATTGATGGGTGGATTCACAAGCGCCTAGTCAAAATGTACACCGATTGCTGCAAAGAGTTGTCTGAGATGCCTAATATGAAAGTACTGAAGAAACTTT ATAATTTAGAGGTTTCAGATGATGAAATTGTTGTGTCTGAGTGTGATCTGCATGATTTGTCTATAACTCCATTGATAAACGCACTGCATTCCCATCAAGC ATTTGCAATGCTTGATCTCTCTCACAATTTGTTAGGAAATGGGACAATGGAGAAACTTCAAAAGGTATTCACAGCATCAGGCCAATCTTATTGTGACTTG ACTCTGGATTTGCATTGCAATCGATTTGGCCCAACTGCTTTGTTTCAGATTTGTGAATGTCCAGTCCTATTTGCTCGACTAGAAGTGCTTAACATTTCTG GAAACCGACTTACTGATGCATGTGGGTCTTATCTTTCAACTATCTTAAAAAGATGTACAGCCCTCTGCAGCTTGAATGTAGAGAATTGTTGTATCACATC AAAAACTATTCAAAAGATTGCTGATGCATTGGACTCTAGATCTGTACTTACACATCTTTGTATAGGAAATAACAGCCCTGTATCTGGAAATGCTATAGTT AATCTTCTGTCCAAGCTGTCTACTTTGGAAAGGTTTTCTGAGCTGAATCTGCATGGTCTAAAACTAGGCAAACCAGTCATTGGTGCCCTTTGCCAGCTTG CAGAGAGCTTGACTTTATCAGGATTAATACTCGGAGGCACGGGTATTGGAACTGAAGGAGTGATGCAATTAGCAAAATCATTGCTCAAAGGAACAGAAGA GCTTGTGAAGCTTGATCTATCATATTGTGGGCTAACATCTAACTTTGCTTTAAATATCAGTGTCAATTTATTTTGGTCCATCCTAGAGCTGAACCTGGAA GGAAATCCTATTATGCGCGAGGGCAGCAATACTCTATTTTCTCTTCTCATGAACCCACAGTGCTGTCTTAAAGTTTTGGTCCTTAGAAAGTGTCAACTTG GGCTCACTGGGGCTCTTCACATAATTGAGGCACTGGCAGAAAACTGCTGCCTGGAGGAGCTTAATCTTGCTGCTAATTCTGTTCCAAATGAACTTACTGC TCTACAATGCCATACATCAGTGCAAGGATGCTCACTAAAGCAAGAGCAAAAGGCTGATACTCTGAAAGTGGATGAAAATCAAGAGTTCCTTTACTCTGAC TACGATCAGCTCGAAGTTGCTGATAGTGAAGAATTACCTGTCAGAGTAGAAGCTGCTGCTTCAGGAATCGATGACAGCTGCGCCAGTTCATATAAAAAAA ATTCTTCATCCCCCGAGTGCCATTTCACACAACAGTTCTCCGTTGCTATCGCCAAAGCAAAGAACTTGCAATTACTGGACCTTAGTGATAATGATTTTTC TGCACAAGCTGCAGAAACGTTCTACAGTTCATGGACAACTTTAAGACCACTTTCAAGTCAGAAGCACATTACCAAATGTATCATTCATTTCTCAACGAAG GAAAATAAGTGCTGCAGAGTAAAACCATGCTGCAAGAAAGTTTGATTTTGTTGCTCCCATCCAATGTCACTGTCCTGATGAAAGCATAAAAGCCAAATCT CCACCAACGATTGAGTTGCAGTTATATGAATAAGAGACATTGTTTTTTTTATTAATTTTTTCATCGTTAACAGCTATAATTTGTAGATGCAAGTTGTAAG TAAGACACGAGTACTCTTGCCTCATTTATCATGTAAAGTAAAAGACTTTTATGAAACACATTCATCCTACTTTCATGTATATATAATAGTATGTACAGAT TAACCAGCCTTACTAACTTGTTGGTAGATATAGTTGTAGTTGTAGTTGTGC
• Tissue: pods
• Gene name: LI_gene_187501;
• Additional information: details;

Expression of Ll_transcript_295971

FPKM

• PAB: 0
• PNAB: 1.2
• PS1: 1.5
• PS2: 2.1
• PS3: 2.5
• PW1: 1.2
• PW2: 2.2
• PW3: 2.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_295971

• Blastp: Protein TONSOKU from Arabidopsis with 49.4% of identity
• Blastx: Protein TONSOKU from Arabidopsis with 49.09% of identity
• Eggnog: repeat-containing protein(COG0457)
• Kegg: Link to kegg annotations (AT3G18730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462874.1)
• Pfam: Tetratricopeptide repeat (PF13181.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;