| Id Trinity | TRINITY_DN51773_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_295972 |
| Sequence | TTATTAAGTTAATTTTGAAAATAGAAATTCACAAGAAAAAAAATAAAATAAAATTACTATTGGCGGGACGGGACATATTTCCTTTCAACCAACAAGAGAC GGCGGGAGTAACATTTGCTTTCACAAATTGAACCCTCAAACAAGAATTGAGAAGTGAAGATAATCCAAAACGACACCGTTCCTCCGTTGTTTTCGAGATG GACTCTGAACTGAAGGCGGCGAGATCCGCCTACCGGAACGCCAAGGCGGATGGCAACCACCGCGAGGAGGCGCGTTGGGCGAACGTCATAAGCGATATTC TAAAAAACAAAGGAGAATATTTTGAATCCCTTAAATGGCTTCGAATCGATTACGAAGTGTCGCTAAAGTACTTGCCCGAGAAAGACTTGCTTCCAACTTG CCAATCCCTCGGAGAAATCTACCTCCGTCTCGAACAATTCTCCGATGCACTCATTTATCAGAAAAAGCATTTAGATCTAGCGAGGGAAGCTAACGACATT GTGGAGCAGCAGAGAGCGAGCACACAACTCGGTCGAACATATTATGAATTGTTTTCGAGATCAGAACATGATCATCACTCGATTCGTAATGCGAAGAAGT ATTTCAATTGTGCGATGGAGCTGGCGGTTACTCTGAAGCAGAATCCGCCGAATAACAAGTCTTCGTTCCTCAAGGAATACATTGATGCACATAACAATAT AGGAATGCTGGAAATGGAGCTTGATAATTTGGATGAGGCGAAGAAGATATTAAATCGTGGACTAGAGATTTGTGATGAAGAGGAGATTAGTGAATTTGAT GATGGGAGAAGTAGGCTTCATCATAACCTTGGGAATGTGTATATGGAACTTAGGATTTGGGATCATGCTAGAAAGCATATCAGAAGGGATATTATAATTT GTAACAGGATTGGACATTGCCAAGGGGAAGCGAAGGGGTATATTAACCTTGGTGAGGTGCATTATAGGACTCAGAAGTATGAGGATGCAAGGTCTTCTTA CGAAAGGGCGCTTGCTTTGGCCAAGTCGCTGGAGGACGAAGACGGTTTGGTTAGGCAAATTGACCGGAATATTGAAATTGTGAAAGAAGCCACGAAAGTG ATGGCTGAAATAAAGAAAGGAGAGCAGAACCTTAAGAAGCTGAGAAGAGATGCAGCAAATGCAAGAGAGACACCACATGAGAGGAAATGCTTGCTGCAGA CAATTAAGTCTCTTGATGACCTCATTGATAAATCAAGATCGATCTCTGTGTGGGAGAAGATAGTCGAAGGGAAGGAACCAAGGCTAAGAGTCCATTGTTT TCAGCGTCATTTAAAAGCAATGTGAATTTGCAAAGGAGAAGAAGAAAATAGCAAGTGAACTCTGTGACAGCCTAAAGCTGGCTGATTCATATCTGGATGT TGGAGAATCATATCAGAAGCTCAGAAAATTCAACAAAGCAATCAAATGGTATAAAAAAAGTTGGGAAACGTACAAAACAATTCGTTACTTGGAGGGGCAA GCACTAGTGAAAATTAATATTGGTAATGTGTTGGATTCTACCCATGATTGGAGAGGAGCATTAGCTGCTTTTCAAGAGAGCTACAGTATTGCTGTTGAAG CTGACCTCCCTGATGTACAGCTTATGGCCTTGGAAAATATGCATTATAGCAACATGGTACGATTTGATGACGAGGATGAGACAAGGACGTTGAAACTTCT AATTGATAAGCTGAGTAAGTCAACAGAAAAATATGCAGAAGCTAAAAACATAGCAGACGATTGTTGCTCTGAGACCGATACTGAAGCAGATGATAACCTA TCAAACAGTGGGTCTGACAATGTCTGCTCTCGCAAGACAATTTCCAGATCAAAAACTTTGGCTACTGGAGAAGTATTGAAAGATGACACGCCTCTTATGT CACTCTATCAGTCCATAAAAGGCTCATCCAGGAAGATAACAGGCCATGTGGAAAAAATTGCCAACTCTACCAAGCAAGCAGATCAGTCACCCAATCTAAC CAGCAATCATCAGACATCCATTGGTCGTAAACGTGTCCGTGTAATTCTTTCTGATGACGATGATGATGAGATGGTGAGTTCAAGCAGAAAGGATCATCGT TGCATGTTTGAGGATTTGTCAACTGATGATGCAATTAAGGGGAAATCCAGTCCTTCTCATAATATTCAGATGGTCTCAGAGTACGGATCTAAACATGTAC ATAATGTTGAAGAAAGTAGTAGTTCTTTCAAATGCTGGAGTCCGCATAGGGTCACTAGACCTGGCAGACATTCTCAATCTTTGAGCAATGATATAGTTAC CGAACCAGATTTTCCTAGTTGTTCAAAATGTGACACAGATGTCTCTGGCAAACAAAATGTTGATGCCCATCCCATGATGAAAAATTCCCAGAATGATTTG CAGCAATATATTACATGCTGGATTGGGAATGATCCAATTCACATAGAAGAATCCATGTGTACTGCCAATGATCAGTTGAACATTGAGTTTTTGAAGGCTG CCATTGCATGCTCATACTATCTACAACTTCCCACAGAAAAGAGATCAGAGGGTTTGTTGCCCATTGTTCAGTACATAAAATGTGCTGGAAGAGATTTAGA ATCCATGGAAACTGTTGAAAGTGTTAAGGAACACCTGAGAAATGACACAATTGAAGCTTCCATTGATGGGTGGATTCACAAGCGCCTAGTCAAAATGTAC ACCGATTGCTGCAAAGAGTTGTCTGAGATGCCTAATATGAAAGTACTGAAGAAACTTTATAATTTAGAGGTTTCAGATGATGAAATTGTTGTGTCTGAGT GTGATCTGCATGATTTGTCTATAACTCCATTGATAAACGCACTGCATTCCCATCAAGCATTTGCAATGCTTGATCTCTCTCACAATTTGTTAGGAAATGG GACAATGGAGAAACTTCAAAAGGTATTCACAGCATCAGGCCAATCTTATTGTGACTTGACTCTGGATTTGCATTGCAATCGATTTGGCCCAACTGCTTTG TTTCAGATTTGTGAATGTCCAGTCCTATTTGCTCGACTAGAAGTGCTTAACATTTCTGGAAACCGACTTACTGATGCATGTGGGTCTTATCTTTCAACTA TCTTAAAAAGATGTACAGCCCTCTGCAGCTTGAATGTAGAGAATTGTTGTATCACATCAAAAACTATTCAAAAGATTGCTGATGCATTGGACTCTAGATC TGTACTTACACATCTTTGTATAGGAAATAACAGCCCTGTATCTGGAAATGCTATAGTTAATCTTCTGTCCAAGCTGTCTACTTTGGAAAGGTTTTCTGAG CTGAATCTGCATGGTCTAAAACTAGGCAAACCAGTCATTGGTGCCCTTTGCCAGCTTGCAGAGAGCTTGACTTTATCAGGATTAATACTCGGAGGCACGG GTATTGGAACTGAAGGAGTGATGCAATTAGCAAAATCATTGCTCAAAGGAACAGAAGAGCTTGTGAAGCTTGATCTATCATATTGTGGGCTAACATCTAA CTTTGCTTTAAATATCAGTGTCAATTTATTTTGGTCCATCCTAGAGCTGAACCTGGAAGGAAATCCTATTATGCGCGAGGGCAGCAATACTCTATTTTCT CTTCTCATGAACCCACAGTGCTGTCTTAAAGTTTTGGTCCTTAGAAAGTGTCAACTTGGGCTCACTGGGGCTCTTCACATAATTGAGGCACTGGCAGAAA ACTGCTGCCTGGAGGAGCTTAATCTTGCTGCTAATTCTGTTCCAAATGAACTTACTGCTCTACAATGCCATACATCAGTGCAAGGATGCTCACTAAAGCA AGAGCAAAAGGCTGATACTCTGAAAGTGGATGAAAATCAAGAGTTCCTTTACTCTGACTACGATCAGCTCGAAGTTGCTGATAGTGAAGAATTACCTGTC AGAGTAGAAGCTGCTGCTTCAGGAATCGATGACAGCTGCGCCAGTTCATATAAAAAAAATTCTTCATCCCCCGAGTGCCATTTCACACAACAGTTCTCCG TTGCTATCGCCAAAGCAAAGAACTTGCAATTACTGGACCTTAGTGATAATGATTTTTCTGCACAAGCTGCAGAAACGTTCTACAGTTCATGGACAACTTT AAGACCACTTTCAAGTCAGAAGCACATTACCAAATGTATCATTCATTTCTCAACGAAGGAAAATAAGTGCTGCAGAGTAAAACCATGCTGCAAGAAAGTT TGATTTTGTTGCTCCCATCCAATGTCACTGTCCTGATGAAAGCATAAAAGCCAAATCTCCACCAACGATTGAGTTGCAGTTATATGAATAAGAGACATTG TTTTTTTTATTAATTTTTTCATCGTTAACAGCTATAATTTGTAGATGCAAGTTGTAAGTAAGACACGAGTACTCTTGCCTCATTTATCATGTAAAGTAAA AGACTTTTATGAAACACATTCATCCTACTTTCATGTATATATAATAGTATGTACAGATTAACCAGCCTTACTAACTTGTTGGTAGATATAGTTGTAGTTG TAGTTGTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_187501; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_295972
| Blastp | Protein TONSOKU from Arabidopsis with 44.16% of identity |
|---|---|
| Blastx | Protein TONSOKU from Arabidopsis with 44.62% of identity |
| Eggnog | repeat-containing protein(COG0457) |
| Kegg | Link to kegg annotations (AT3G18730) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462874.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |