Ll_transcript_296119

• Id Trinity: TRINITY_DN51781_c0_g1_i18
• Name Transcript: Ll_transcript_296119
• Sequence: CTTTCTCAGAGGGGTAGTGAAGTGAATTTGACACTCGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTATCAAAGCAGATAAGAAACTCTTGACTG TACAATTTCCTGACATTCGTGACGGACGAGCATTCACACTTAAGGCTGAAACTACTGAGGATTTATATGAGTGGAAGAATGCACTTGAGGATGCTTTGGC ACAAGCACCAAGTGCTGGTAATGTGAAGGGAGAAAATGGTGACTTTAATAATGATCAGTTTGATTCACTTGACATTTGTTTGGATCAGTTGAAGGATGTG AAGGAAAGACGAGACGCGATGAAATCTACAGTCATTGGCCGGCCACTTTTACTTGCTTTGGAGGATACTGATGGAACTCCAACTTTTTTGGAGAAAGCCT TGAGGTTCATAGAAGTGCATGGAGCCAAAGTAGAAGGGATCTTGCGACAAGCAGCTGATGTTGAACATGTTAAAAATCGAGTGCGCGAATACGAGGAAGG AAACACTGAATTCTCAGAGGAGGAGGATGCACATGTTATTGCTGATTGTGTTAAGTACGTAATCCGGGAATTGCCGTCTTCTCCTGTCCCTGCATCTTGT TGCAAGGCACTGTTAGAAGCTTGTAGAACTGGACGTGCTAATCGGGTTTCTGCGATGCGTATAGCAATTTGGGATACTTTTCCTGAACCAAACCGCTATT TATTGCAAAGAATACTCTTGATGATGCAAGCTGTAGCTTCCCGCAAAGCTGAGAATAAAATGAGCTCATCAGCAGTGGCAGCTTGCATGGCACCATTACT TCTTCGTCCCCTTCTAGCTGGAGATTGTGAGATTGAAAATGATTTTGATGTAGGTGGTGGTGATGATTCTATTCAACTTTTACAAGCAGCTGCTGCAGCA AACCATGCTCAAGCAATTTGTATAACTTTATTAGAAGAATATAACAGCATATTTGGGGAAGGTTCTGAATCCCCTGATATATATACCGACACAGAAGAAA GTGGATCTGAAAGTGAGGAGGGCACGGATGATGATTTGTCCTATGATGATGAGGATTATGACGACGACGAAGATGGATCAGTACATGAGTCTGATGTAGA TGATGATCTTGGTAGTGAATCCTATAGCGAGACTGGAGAGTCTCAAGCCTATGATGAGCATGATGATAAGGACCATGATCATTCTAGTCCAAGTTCAAAA TCCTCCGGCGCGAGTGAAGAATTTAGAGTCACTCGACCATCAAAGTCATTTCGAGGCTCACAACCTCAGCATCAAGATATAAAAAACAGTAAAAATCTGA GGAGTCCTACTAAGAATGCTTGTGCAGATCAGTCCAATGAGCCTGCTAATATTGCTGGAGGTGTTTCCACTGACCAATCTACAGAGGACAATTCAGATTT TCCTAGCGCTTCTTCATGTATCAAAAAATCTATAACCATGTCCAATGGTGGTGCTCCAAGTCCAACACCTCGGCGCCGAACCATGTTGGGGCGTACTTCT GCAAGAAAGAATCTTTCCATGGAATCCATTGATTTTCCTATTGACGATGAAGATGAAATTGAAAGGCTCGAAACAACTAGGACAGAATTACAAACCCAAA TTGCACAGGAGGTGGAGGCAAACGTAAAGCTGCAATCTCATATCGACAAGAGAAAGAAAGACTTGCAAGAGCGCCGTCTGGCTCTTGAGCAAGATGTGGC AAGGCTGCAGGAACAATTGCGCAAGGAAAAGAAGTCTCGGGCTAAATCACACCTTGAGGAATTAGCTTTCGTAGAAGTAGATCTTACTGACTTGGAGCGC AAGGTTGAAGAACTTGGGACGCGGCTCAATGCACAACTTGAGCAGAATTTTGGATCTACCTTGGATTCCTATAATCAATCGGAACAGATATCAAGTGATG AAAGAAAATGGAAGAATAAGCAAGATACTGAAGATTCTGCCACATCACAATCTGACAGGTCAATAAGTAAGGGCACTAATCTTGGAGCAGAAAATGAAAA TGAGAGGAAGGCAGAGTCAATACCATTTTCAAACAAACAGCCACCGACTAGTTCCAAAAAATCCGGTTCAAAGGGTGAGGTGCGCCAAAGTTCGGATAAA GGACGTGATCGAGATTCAATTTCAAACAACCTAGAAAAAGGAAAAGGACCTGAAACTCAATATGCGGCAAACCAAGAAAAGGGTAGAGGCTTAGACAGCT CCCATTCGGGCAAAGAAAAATCACATCAAAGTTCAGAGAAATTAAGAAAGTCGGATAGTCAACCAGGCTATCATTCAGAAGGGTGGAATCCAAATCAACA TCCAAGACACTTGGAAAGGGGAAGATCAGAAGGCCATCATCCGTCTTATAATGCCGATAAAGGACGATGATGACAAGGTCAATCTTTCGTTACAAGTTCC AGAGTGGTACTCAGCCACTGCAATCAATCAGTTTTTGTTGTCAAAGTCTATCATTGCTTATGTCTTCAACAATGTTTTGAGTGGTTTTATGAAATACAGT TGTAAGGAGAATCCTTCTTAGTCCCTAGAGACAAAAGTACAGAACCACTCCAGTTTCACCAAAAAGTAGGATGCCCAATGCATAGTTTGATGGTTCAAGC ATATCCATGAAATAAGCTGAACTGCTTGAAATCTAACATTGCTGATTTGTTCTTACTAGCTCAGTGAACAGAATGATTGTTATACAATTACATTATCATA TTTGTAACTGCAATAATGCTGTTGTTTGGCATAAGCTTGCAGAGCATTATGCAGATAGATAGAACAGGGCTTAAGTAATATTTTTGGTATGACTAATTTT ACATTTCTTAATTTCACTGTGTATTCATGTTACAAAAATATATGTCCAGAAAGGAAGAAAA
• Tissue: pods
• Gene name: LI_gene_187557;
• Additional information: details;

Expression of Ll_transcript_296119

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0.2
• PS2: 0.2
• PS3: 0.3
• PW1: 0.2
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296119

• Blastp: Rho GTPase-activating protein REN1 from Arabidopsis with 50.12% of identity
• Blastx: Rho GTPase-activating protein REN1 from Arabidopsis with 47.69% of identity
• Eggnog: rho GTPase activating protein(ENOG410XR4E)
• Kegg: Link to kegg annotations (AT4G24580)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416051.1)
• Pfam: RhoGAP domain (PF00620.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;