Ll_transcript_296120

• Id Trinity: TRINITY_DN51781_c0_g1_i19
• Name Transcript: Ll_transcript_296120
• Sequence: TTTAAATAGAATGAGCTCCTCAGCTGTAGCTGCTTGCATGGCACCATTACTTCTTCGTCCCCTTCTAGCTGGAGATTGTGAGATTGAAAATGATTTTGAT GTTGGTGGTGATGGTTCAGTACAACTTTTACAAGCAGCAGCTGCTGCAAACCATGCTCAAGCAATTTGTATAACTTTATTAGAAGAATATAACAGCATAT TTGGGGAGGGTTCTGAATCTCCCGATATATACACCGACACAGAAGAGAGTGGGTCTGAGAGCGAGGAGGCTACAGATGATGATTTGTCCTATGATGATGA TGAGGATTATGACGATGAAGAAGATGGATCAGTACACGAGTCTGATGTAGAAGATGATCTTGTTAGTGAATCCTATAGTGAGACTGGAGAGTCTCAGGGC AATGATGATAAGGACCATGATGGTTCTGGTCCAAGTTCAAAATCCTCGGGTGCGAGTGAGGAATTTAAAGTCATTCAACCATCAAAATCACTTAAAGGCT CACGACCTCAGCATCAAGATATCAAAAGCAGTGAAAATCTCACAAATCTAACTAAGAATGCTTGTGCAGATCAGTCCAATGAGCCTGCTGATATTGTTGG AGGTGTTTCCACTGACCATGTTACAATGGATAATTCAGATTTTACTAGCCCTCCACATATAAAAAAATCTATGACCATGTCTAATGGTGGTGCTCCAAGT CCAACACCTCGACGCCGCACCATGTTGGGGCGTACTTCTGCAAGGAAGAATCTTTCCATGGAATCCATTGATTTTCCTATTGACGATGAAGATGAAATTG AAAGGCTTGAAGCAACTAGGACAGAATTGCAAACTCAAATAGCACAGGAGGTGGAGGCAAATGTAAAGCTGCAATCTCATATTGATAGAAGAAAGAAAGA GTTGCAAGAGCGCCGTTTGGCTCTTGAGCAAGACGTGGCTAGGCTACAAGAACAGTTGCACAAGGAGAAGAAGTCTCAGACCAAATCAGACCTTGAGGAA TTAGCTTTGGTAGAAGTAGATCTCACTGATTTGGAGCACAAGGTTGAAGAACTTGGGATTCGTCTCAATGCACAACTTGAGCAGAATTCTGGATCTACTT TGGATTCCTATAACCAATCGGAACAAATATCAAACGATGAAAGAAAATTGAAAAGTAAGCCAGATACTGACCGGAAAAATAAGCCACATACTGAAGTTGC TGCCACATCACAATCTGACAGGTCAATAAGTAAGGATACTAATCTTGGTGGAGCAGAAAATGATAATGAGAGAAAGTCAGAGTCAATACCATTTTCAAAC AAACAGCCACCAACTAGTTCCAAGAAATCTGGTTCAAAGGGTGAGGGAGCAAATTCCACTCCTTCTGCATTGACAAAACTGACATCCAGGCTGAACTTTT TGAAGGTGCGCCAAAGTTCGGATAAAGGCCGCGATCGAGATTCAAATTACTCTTTACAAAACCTGGAAAAAGGAAAAGGACCTGAAACTCAATATGTGTC AAACCCAGAAAAGGGCAGAGGCTTAGAGAGTTCCCACTCAGGCAAATGTAAATCATCAAATCAAAATTCAGAGAAATTGCGGAAATCAGATAGTCAGCCA GGCTACCACTCAGAAGGGTGGAATCCAAATCAATATCCGAAACAATTGGAAAGAGGAAGATCAGAAGGCCATCATCAGCCTTATAACATCGATAAAGGAC GATGATCACAATGCCAATCCTTTGTTACACAACAAATTCTTGAATGATCTGTGTGAGCCCATTGCAACCAGTTAGAGTTTCTTTTGTCCTAGTCTGCTAT TGCTTATGTCTTCAACAATGTTTTGATTGGTTTTATGAAACACAATACTTCTTTGTTAAGGTTGGCACTAGATACATGATCAATGGAGACAAAAGCAATC CATTTACCCCAAAAAGCAGGATTTGCAATGCATAGTTTGATAGTTCAAGGATCTCCATGACATGAGCCCAACCTTTTGAAATCCAACATTTGCTGATTTT TTTACTAGCTCAGTAAACAGCATCATGGTTTTGCAAATACATTATCTTATTTGTAACTACAATAATGTTTAGTTGTTTGGCATAACCTTACAGTAGACAT TTTTATTAATGTGGGCATGCATTAAAGATTTTGTGTCATTTATCTATAACATTAAATATTGAAAATGAG
• Tissue: pods
• Gene name: LI_gene_187557;
• Additional information: details;

Expression of Ll_transcript_296120

FPKM

• PAB: 0.2
• PNAB: 1.4
• PS1: 1.8
• PS2: 0.6
• PS3: 1.9
• PW1: 1.3
• PW2: 0.3
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296120

• Blastp: Rho GTPase-activating protein REN1 from Arabidopsis with 39.83% of identity
• Blastx: Rho GTPase-activating protein REN1 from Arabidopsis with 39.77% of identity
• Eggnog: rho GTPase activating protein(ENOG410XR4E)
• Kegg: Link to kegg annotations (AT4G24580)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438507.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;