Ll_transcript_296104

• Id Trinity: TRINITY_DN51781_c0_g1_i5
• Name Transcript: Ll_transcript_296104
• Sequence: TTTAAATAGAATGAGCTCCTCAGCTGTAGCTGCTTGCATGGCACCATTACTTCTTCGTCCCCTTCTAGCTGGAGATTGTGAGATTGAAAATGATTTTGAT GTTGGTGGTGATGGTTCAGTACAACTTTTACAAGCAGCAGCTGCTGCAAACCATGCTCAAGCAATTTGTATAACTTTATTAGAAGAATATAACAGCATAT TTGGGGAGGGTTCTGAATCTCCCGATATATACACCGACACAGAAGAGAGTGGGTCTGAGAGCGAGGAGGCTACAGATGATGATTTGTCCTATGATGATGA TGAGGATTATGACGATGAAGAAGATGGATCAGTACACGAGTCTGATGTAGAAGATGATCTTGTTAGTGAATCCTATAGTGAGACTGGAGAGTCTCAGGGC AATGATGATAAGGACCATGATGGTTCTGGTCCAAGTTCAAAATCCTCGGGTGCGAGTGAGGAATTTAAAGTCATTCAACCATCAAAATCACTTAAAGGCT CACGACCTCAGCATCAAGATATCAAAAGCAGTGAAAATCTCACAAATCTAACTAAGAATGCTTGTGCAGATCAGTCCAATGAGCCTGCTGATATTGTTGG AGGTGTTTCCACTGACCATGTTACAATGGATAATTCAGATTTTACTAGCCCTCCACATATAAAAAAATCTATGACCATGTCTAATGGTGGTGCTCCAAGT CCAACACCTCGACGCCGCACCATGTTGGGGCGTACTTCTGCAAGGAAGAATCTTTCCATGGAATCCATTGATTTTCCTATTGACGATGAAGATGAAATTG AAAGGCTTGAAGCAACTAGGACAGAATTGCAAACTCAAATAGCACAGGAGGTGGAGGCAAATGTAAAGCTGCAATCTCATATTGATAGAAGAAAGAAAGA GTTGCAAGAGCGCCGTTTGGCTCTTGAGCAAGACGTGGCTAGGCTACAAGAACAGTTGCACAAGGAGAAGAAGTCTCAGACCAAATCAGACCTTGAGGAA TTAGCTTTGGTAGAAGTAGATCTCACTGATTTGGAGCACAAGGTTGAAGAACTTGGGATTCGTCTCAATGCACAACTTGAGCAGAATTCTGGATCTACTT TGGATTCCTATAACCAATCGGAACAAATATCAAACGATGAAAGAAAATTGAAAAGTAAGCCAGATACTGACCGGAAAAATAAGCCACATACTGAAGTTGC TGCCACATCACAATCTGACAGGTCAATAAGTAAGGATACTAATCTTGGTGGAGCAGAAAATGATAATGAGAGAAAGTCAGAGTCAATACCATTTTCAAAC AAACAGCCACCAACTAGTTCCAAGAAATCTGGTTCAAAGGGTGAGGTGCGCCAAAGTTCGGATAAAGGCCGCGATCGAGATTCAAATTACTCTTTACAAA ACCTGGAAAAAGGAAAAGGACCTGAAACTCAATATGTGTCAAACCCAGAAAAGGGCAGAGGCTTAGAGAGTTCCCACTCAGGCAAATGTAAATCATCAAA TCAAAATTCAGAGAAATTGCGGAAATCAGATAGTCAGCCAGGCTACCACTCAGAAGGGTGGAATCCAAATCAATATCCGAAACAATTGGAAAGAGGAAGA TCAGAAGGCCATCATCAGCCTTATAACATCGATAAAGGACGATGATCACAATGCCAATCCTTTGTTACACAACAAATTCTTGAATGATCTGTGTGAGCCC ATTGCAACCAGTTAGAGTTTCTTTTGTCCTAGTCTGCTATTGCTTATGTCTTCAACAATGTTTTGATTGGTTTTATGAAACACAATACTTCTTTGTTAAG GTTGGCACTAGATACATGATCAATGGAGACAAAAGCAATCCATTTACCCCAAAAAGCAGGATTTGCAATGCATAGTTTGATAGTTCAAGGATCTCCATGA CATGAGCCCAACCTTTTGAAATCCAACATTTGCTGATTTTTTTACTAGCTCAGTAAACAGCATCATGGTTTTGCAAATACATTATCTTATTTGTAACTAC AATAATGTTTAGTTGTTTGGCATAACCTTACAGTAGACATTTTTATTAATGTGGGCATGCATTAAAGATTTTGTGTCATTTATCTATAACATTAAATATT GAAAATGAG
• Tissue: pods
• Gene name: LI_gene_187557;
• Additional information: details;

Expression of Ll_transcript_296104

FPKM

• PAB: 0
• PNAB: 1.3
• PS1: 1.6
• PS2: 1.1
• PS3: 0.3
• PW1: 1.3
• PW2: 0.7
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296104

• Blastp: Rho GTPase-activating protein REN1 from Arabidopsis with 38.06% of identity
• Blastx: Rho GTPase-activating protein REN1 from Arabidopsis with 37.82% of identity
• Eggnog: rho GTPase activating protein(ENOG410XR4E)
• Kegg: Link to kegg annotations (AT4G24580)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438509.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;