Id Trinity | TRINITY_DN51793_c0_g1_i18 |
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Name Transcript | Ll_transcript_297411 |
Sequence | AATAAATTGATTACTTTTCCGGCAACTTTATGAGATCTGATTTACCATTGGAAATTCCGAAAATGGGTTCGCATCGAAAGAGAAAATGGTTTGGTCAGAG TAGTGACGTGGCAAGATCTCTGGCTTCTTCTCTCTCTCTGGTTCCTTATAACTAAAACGACAACAACCATTTGAAAAAGCTCGTTCCTTCTTAGATCTGG ATCTCTAACGCCATGGCGTTTTGGAGATCTATCGCTTTCTCTGCACTTCTTCTTCTTCTCATCCATCACGCTCACTGCTTCTACTTACCTGGTGTTGCTC CACAGGATTTCCAAAAGGGAGATTTATTGCAAGTGAAAGTAAACAAATTAACATCAGTGAAGACCCAGCTTCCATACACATATTATTCACTCCCTTATTG TAGCCCAGCAAAGATACAGGATAGTGCAGAAAATCTTGGGGAAGTTCTTCGTGGTGACCGCATTGAAAATTCTCTTTATGCGTTTAAAATGCGCGAACCA CAATTGTGCAATGTTGTGTGCAATCGTAAACTTGATGCTAAAGCCGCTAAGGAGTTCAAAGAGAAGATCAATGATGAGTATCGTGTGAACATGATACTAG ATAATCTTCCTCTAGTTGTTCCTTTAAAAAGGAATGATATGGATTCTACTGTGTATCAGCTTGGTTTCCATGTTGGACTCAAGGGGCAGTATAGTGGGAG CAAGGAGGAAAAGTTTTTTATCCACAACCATTTGGCATTTACTGTCAAATATCATAAAGATCTGCAAACTGAATCTGCTAGAATTGTGGGCTTTGAGGTT AAGCCATTCAGTGTAAAACATGAATATGAAGGTAAGTGGGATGAAAAGACCCGTTTGACAACATGTGACCCTCATGCTAAACACACAGTTGTCAACTCTA ACACTCCCCAAGAGGTTGAAGAGAACCAAGAAATCATCTTCACTTATGATGTTGATTTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTA TTTGCTAATGAATGATGATCAAATTCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTCCTTTCGGGTATGGTGGCAATGATAATGCTGCGG ACATTGTACCGGGATATTTCAAGGTACAATGAGCTTGAGACCCAAGAAGAAGCTCAAGAAGAGACTGGTTGGAAGCTTGTCCATGGTGATGTGTTTAGGC CCCCTCAGAACTCAGACCTGCTCTGTGTTTATGTCGGAACTGGTGTTCAGTTTTTTGGAATGATACTAGTAACCATGTTATTTGCAATCCTTGGTTTCCT ATCTCCTTCAAACCGAGGTGGGCTAATGACAGCCATGCTCTTGCTTTGGGTTTTCATGGGACTTTTTGCTGGTTACGCCTCAACTCGCTTATACAAAATG TTCAAAGGATCTGAATGGAAGAAAATTGCCTTCAGGACCGCAGTCTTCTTCCCAGCTTCCGTCTCTGTCATTTTTGCTGTATTGAACACTTTAATCTGGG GCCAAAAATCATCCGGAGCTGTGCCATTTGGTACCATGTTTGCTCTGATCTTTTTATGGTTTGGAATCTCAGTCCCACTTGTTTTTGTGGGTAGCTATGT TGGATTCAGGAAGCCTGCAATTGAGAATCCAGTGAAGACAAACAAAATCCCAAGGCAGATCCCAGAGCAGGCCTGGTACATGAACCCAGCCTTCTCGGTT CTTATTGGGGGGATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACCTCGATCTGGTTGAATCAGTTTTACTACATCTTCGGATTCC TCTTTTTGGTCTTCATCATCCTCATTATCACATGTGCTGAGATAACCATTGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCG GTCATACCTCACTTCTGGTTCTTCCGCACTTTACCTATTTCTTTATGCAACATTTTACTTTTTCACCAAGCTTGAAATCACGAAGTTGGTATCTGCAATA CTATACTTCGGGTACATGCTTATAGCTTCTTATTCTTTCTTCGTGGTGACCGGTACTATCGGATTTTATGCTTGCTTTTGGTTCACAAGGCTCATCTACT CCTCAGTCAAAATTGATTAGTTATAGAAGTCTGGTTTTGGTTCATCTACCAATATCCCTAGTAAAGTTTAAGGATTTTGAAATTCAGTTACTCTATCATG TTCAGATGTAACCTATTTTATACAATTTTTCAATTGTGGCAACTATGATTCTTTTGTTTCAGTATCATTTTTATTGCCTTTGTCATAGTCAATCAAATCC TCGTTAAATCACAGATTTTTCAGTGGTAAACGTTTTAATATTATCAGAGCGGAATATCTAAATAGAAATGAAATCTTGAGC BLAST |
Tissue | pods |
Gene name | LI_gene_187648; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_297411
Blastp | Transmembrane 9 superfamily member 9 from Arabidopsis with 83.7% of identity |
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Blastx | Transmembrane 9 superfamily member 9 from Arabidopsis with 83.7% of identity |
Eggnog | transmembrane 9 superfamily(ENOG410XPIW) |
Kegg | Link to kegg annotations (AT5G25100) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415275.1) |
Pfam | Endomembrane protein 70 (PF02990.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |