| Id Trinity | TRINITY_DN51793_c0_g1_i24 |
|---|---|
| Name Transcript | Ll_transcript_297418 |
| Sequence | GTTGCACCACAAGATTTTCAAAAGGGAGATTTGTTGCAAGTGAAAGTAAACAAATTAACATCGATAAAGACACAGCTTCCGTATACCTATTATTCACTCC CTTATTGTAGCCCAGCAAAAATTCAGGATAGTGCAGAAAACCTCGGGGAAGTGCTTCGTGGTGACCGCATTGAGAATTCTCTTTATGTGGTCAGTGTAAC ATGACATGTTAAATCATGACTGTTTACCTTTACGAAAAAACCACAAGAAACTATTTCTTTGTGAAATTATTTTGATGTTAAGAAACAAATGACAACTCAA TAAGTTTGCAGTTAATGAGTAATTTCTTACTGGCTTAATTAACCATACAGTGGTCCATTGTTTCCAAGCTGAATTTGTTGTTAGCAACAGTTCTTTCTAT GTAATACCTCTTAATTATGTTATGGTTATCAACTGATTCTGACATATTGCAGTTTAAAATGCGTGAGCCACAAATGTGCAATGTTGTGTGTAATCGTAAA CTTGATGCCAAAGCTGCTAAGGAGTTCAAAGAAAAGATCAATGACGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCTATAAAAA GGAATGATCAGGATTCTACTGTTTATCAGCTTGGTTTCCATGTTGGACTCAAAGGGCAGTATACTGGGAACAAAGAGGAGAAGTTTTTTATTCACAACCA TTTGGCATTTACTGTCAAGTATCATAGAGATTTGCAAACTGAGTCTACCAGAATTGTGGGCTTTGAGGTCAAACCATTCAGTGTAAAACATGAATACGAA GGTAAGTGGGATGAAAAGACTCGTTTGACTACCTGTGACCCTCACTCTAAACACACAGTTGTCAACTCCAATACTCCGCAAGAGGTTGAAGAGAACCAGG AAATCATCTTCAGTTATGATGTTGAATTCCAAGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTAATGAATGATGACCAAATTCACTG GTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTCCTTTCCGGCATGGTGGCAATGATAATGCTGCGGACACTGTACCGTGACATTTCGAAGTACAAT GATCTTGAAACCCAAGAAGAAGCTCAAGAAGAGACTGGTTGGAAGCTTGTCCATGGTGATGTCTTTAGGGCTCCTCAGAACTCAGACTTGCTCTGTGTTT ATGTCGGAACTGGTATTCAGTTTTTTGGGATGATACTAGTAACCATGATCTTTGCCATCCTTGGTTTCCTTTCTCCTTCGAACCGAGGTGGGCTAATGAC AGCCATGCTCTTGCTATGGGTTTTCATGGGACTTTTTGCTGGTTATGCCTCAACTCGCTTATACAAAATGTTCAAAGGGTCAGAGTGGAAGAAAATTGCC TTCAGGACTGCAATATTGTTCCCTGCTTCTGTCTCTGCCATTTTCGCTGTCTTAAACACTTTAATATGGGGGCAGAAATCATCTGGAGCTGTTCCATTTG GTACCATGTTTGCTCTGATCTTTTTATGGTTTGGGATTTCAGTTCCACTTGTTTTTGTGGGGAGCTATGTTGGATTCAAGAAGCCTGCAATTGAGAATCC AGTGAAGACAAACAAAATCCCAAGACAGATCCCTGAGCAGGCCTGGTACATGAACCCAGCCTTCTCAGTTCTGATCGGTGGGATACTCCCATTTGGAGCT GTTTTCATTGAGCTTTTCTTCATCCTCACATCGATCTGGTTGAATCAGTTTTACTACATCTTCGGATTCCTCTTTTTGGTCTTCATCATCCTCATTATCA CATGTGCTGAGATAACCATTGTGCTCTGCTACTTCCAGCTGTGCAGTGAAGATTACTTGTGGTGGTGGCGGTCATACCTCACCTCTGGTTCTTCTGCACT ATATCTATTTCTTTATGCCACATTTTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGCCATATTATACTTTGGGTACATGCTGATAGCTTCT TACGCATTCTTCGTGGTGACCGGTACTATCGGATTTTATGCTTGCTTTTGGTTCACAAGGCTCATCTACTCCTCAGTCAAAATTGATTAGTTATAGAAGT CTCGTTTGGTTTAATCTACTATACCTCGTAAAACTTGTTAGGATTTTGAATTTCAGGTACTCTATCATGTTCAGATGTAACCTATTTTTATACAATTTTG AATTATGAGGACAGTGATTCTTTTGTTTGTGTCATTTTAATTGCCTATGTCATTCTAGGATCCTCGTTATATCACAGATTTTTCTATGGCAGATGTTTTA ATATTATCAGACCAGAATATCTGAATAGAAATGAAATCTCCCTCTTAATTAACACTTTGCTATTATCTTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_187648; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_297418
| Blastp | Transmembrane 9 superfamily member 8 from Arabidopsis with 86.31% of identity |
|---|---|
| Blastx | Transmembrane 9 superfamily member 8 from Arabidopsis with 86.31% of identity |
| Eggnog | transmembrane 9 superfamily(ENOG410XPIW) |
| Kegg | Link to kegg annotations (AT5G10840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417202.1) |
| Pfam | Endomembrane protein 70 (PF02990.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |