Ll_transcript_297393

• Id Trinity: TRINITY_DN51793_c0_g1_i4
• Name Transcript: Ll_transcript_297393
• Sequence: CCCGGGGGAAAAATTACCCCTAACCCAATCTTAATCCCAATCCCAAGTATTCGCTTCTTCATCTTCCTCTTTTCCTCCTTACTCAAAACGAATCTCGATC TCGATTTCCATGGCGTTTTGGAGATCGCTCGCTTTCTCTTCACTTCTCGCTCTTCTTTTCATCCATGGTTCTCACTCTTTCTACCTCCCTGGTGTTGCTC CACAGGACTTCAACAAGGGAGATTTATTGCAAGTGAAAGTAAACAAATTAACATCAATAAAGACCCAGCTTCCGTACACATATTATTCACTCCCTTATTG TAGCCCAAACAAAATACAGGACAGTGCAGAAAATCTTGGGGAAGTGCTTCGCGGTGACCGCATTGAAAATTCTCTCTATGCGTTTAAAATGCGTGAGCCA CAAATGTGCAATGTTGTGTGTAATCGCAAACTTGATGCCAAAACTGCTAAGGAGTTCAAAGAGAAGATCAATGATGAATATCGGGTGAACATGATCCTAG ATAACCTTCCTCTAGTTGTTCCTATAAAAAGGAATGATCAGGATTCTACTGTTTATCAGCTTGGTTTCCATGTTGGACTCAAAGGGCAGTATACTGGGAA CAAAGAGGAGAAGTTTTTTATTCACAACCATTTGGCATTTACTGTCAAGTATCATAGAGATTTGCAAACTGAGTCTACCAGAATTGTGGGCTTTGAGGTC AAACCATTCAGTGTAAAACATGAATACGAAGGTAAGTGGGATGAAAAGACTCGTTTGACTACCTGTGACCCTCACTCTAAACACACAGTTGTCAACTCCA ATACTCCGCAAGAGGTTGAAGAGAACCAGGAAATCATCTTCAGTTATGATGTTGAATTCCAAGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTA TTTGCTAATGAATGATGACCAAATTCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTCCTTTCCGGCATGGTGGCAATGATAATGCTGCGG ACACTGTACCGTGACATTTCGAAGTACAATGATCTTGAAACCCAAGAAGAAGCTCAAGAAGAGACTGGTTGGAAGCTTGTCCATGGTGATGTCTTTAGGG CTCCTCAGAACTCAGACTTGCTCTGTGTTTATGTCGGAACTGGTATTCAGTTTTTTGGGATGATACTAGTAACCATGATCTTTGCCATCCTTGGTTTCCT TTCTCCTTCGAACCGAGGTGGGCTAATGACAGCCATGCTCTTGCTATGGGTTTTCATGGGACTTTTTGCTGGTTATGCCTCAACTCGCTTATACAAAATG TTCAAAGGGTCAGAGTGGAAGAAAATTGCCTTCAGGACTGCAATATTGTTCCCTGCTTCTGTCTCTGCCATTTTCGCTGTCTTAAACACTTTAATATGGG GGCAGAAATCATCTGGAGCTGTTCCATTTGGTACCATGTTTGCTCTGATCTTTTTATGGTTTGGGATTTCAGTTCCACTTGTTTTTGTGGGGAGCTATGT TGGATTCAAGAAGCCTGCAATTGAGAATCCAGTGAAGACAAACAAAATCCCAAGACAGATCCCTGAGCAGGCCTGGTACATGAACCCAGCCTTCTCAGTT CTGATCGGTGGGATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACATCGATCTGGTTGAATCAGTTTTACTACATCTTCGGATTCC TCTTTTTGGTCTTCATCATCCTCATTATCACATGTGCTGAGATAACCATTGTGCTCTGCTACTTCCAGCTGTGCAGTGAAGATTACTTGTGGTGGTGGCG GTCATACCTCACCTCTGGTTCTTCTGCACTATATCTATTTCTTTATGCCACATTTTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGCCATA TTATACTTTGGGTACATGCTGATAGCTTCTTACGCATTCTTCGTGGTGACCGGTACTATCGGATTTTATGCTTGCTTTTGGTTCACAAGGCTCATCTACT CCTCAGTCAAAATTGATTAGTTATAGAAGTCTCGTTTGGTTTAATCTACTATACCTCGTAAAACTTGTTAGGATTTTGAATTTCAGGTACTCTATCATGT TCAGATGTAACCTATTTTTATACAATTTTGAATTATGAGGACAGTGATTCTTTTGTTTGTGTCATTTTAATTGCCTATGTCATTCTAGGATCCTCGTTAT ATCACAGATTTTTCTATGGCAGATGTTTTAATATTATCAGACCAGAATATCTGAATAGAAATGAAATCTCCCTCTTAATTAACACTTTGCTATTATCTTT C
• Tissue: pods
• Gene name: LI_gene_187648;
• Additional information: details;

Expression of Ll_transcript_297393

FPKM

• PAB: 7.9
• PNAB: 20.1
• PS1: 16.6
• PS2: 10.3
• PS3: 14.6
• PW1: 15.8
• PW2: 24.1
• PW3: 20.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_297393

• Blastp: Transmembrane 9 superfamily member 8 from Arabidopsis with 85.83% of identity
• Blastx: Transmembrane 9 superfamily member 8 from Arabidopsis with 86.15% of identity
• Eggnog: transmembrane 9 superfamily(ENOG410XPIW)
• Kegg: Link to kegg annotations (AT5G10840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417202.1)
• Pfam: Endomembrane protein 70 (PF02990.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;