Ll_transcript_297262

• Id Trinity: TRINITY_DN51799_c1_g1_i5
• Name Transcript: Ll_transcript_297262
• Sequence: TAAAATAATAATTTATTTATACTTTATAATGGAGTGTAGTTTATTGTCAACTGTTTATTACTTGGTTTGACCAACTTGTTTTGTTTTGTTTTGTCTCGAG AGAACAAGAAACGCAATTCCACTTTTCTCTCTAACTTCTTCTTCTTCTTCTTCTCTCTCTCTCTCTGTGAGGGTTGATGGAGTTTGTTGGCAAAATCGTT AAGAGAGAGTTTGAGGGAATTGGGATTCTGTGTGGTACTGTCAAATCCTATCACTCTTCCTCTGCTTCCGTTGAGATCCAATATGAAAATGGTCATTCCG AGCACTTGAATTCTGCTCAACTCCCTTCCCTCCTTCAACCTCCTCCACCGGATCGCAAACCTACAAAACGGCGTCGTTTCCACCACTCAACTCAGATTGG AGCAAATTCAGGTAATTTCACTCATAATTTGGTAGACGAGGATTGTCAAATTAAGGGGAATTCGGAAGTGTGTGCTGAAATAGGTTCTGACTTTGATAGA AGCTTAGGTAATGGGAGTCAAGTGATTGTAGGAAAGAGTATTAGGTCTGAGGACTCTTTGGATCATGAGAGTGTCTCTCCTAATCAGAATGGGTTTGATT TGAATGCTAGGATTAATCTGAACGAGGATTTCAATCTGAATGAAGTCTGTACTTCAATTCTTAATAACACTCAGGATGGTAGTTTGAAGAGAAGGGATTC AATTGATTTAAATTTGGACGTGGATGATGAGGAGGATGGTGGTAATTCGGATGTTAATTATTTTGGCTGTTTGGGAGGACTAACATTGATGGAGGATCGT AACATTGATTTGAATATGGAGGTATGTGAAGAAGTTAGGGAAGCACATGGTGATCAAGTCAATGGAAATGAACATTCTCAGGTGGATGCTTTGTTTGATA AGATAGAGCAGGCTAATATTAATCAGAAATCTATAGAAGGTGGCAGTGTTTGTCGTAATCTGAATGATGTCCCAGATGCAAACAAGTTGGAGGTAATTCA TGCTTCCACCAAACATGCAGCTAACGATGCCGCTACACGTTTGATTGTGGAAAGTGAAGGTGATGCTGGTAAAGGAGATATATCAACTACTGACTCTCTC ATGGTTACAAATGCATTTTCTGTTAAGGATTGTAATTACGTGGAGGTTCGGAAAACTGATAATAGTCCTTTTGATTACCTAGGGAGTAGCCGGAGGAAGA GAAGAAAAGTATCAGATAGTCTAAAAACCACGCCACATACACTTTTAAGGAGGAGTTCTCGCCGGGCATCGGCTAGAAACCAGGTTTCAGGCACCATGCC ATTGCAGGAGATGGATGATCCTTTGTCATCCACTGTACCCAGTTCCTTAACAGAAGAAAAACCGGTAACCACTGGTGATGAGAAATCTGACCAGTGCAAT CTTCCACCACCAAAGTTGGAATTACCCCCTTCTTCCCCAAATTTGAATTTAGATGGTCTTCCTGTTCTTGAACTTTTTTCTATTTACACTTTTTTAAGAT CTTTCAGTACTACATTATTTTTGAGTCCATTTGAGTTGGAGGATCTTGTTGCCGCACTGAAGTCTGAAACCCCCACTATATTATTTGACAACATCCATGC TTCTATCTTGCAAACTTTGAGAAAGCATTTAGAATACCTTTCCAATGAGGGTTGCCAATCCGCGTCCGATTGCCTGAGGAATCTTAACTGGGATTTCTTG GACCTGATCACATGGCCCATTTTCATGGCCGAGTACCTTCTGATTCATGGCTCAGGATTTAAAACTGCTTATGATCTTAACCACTCAATGTTTAGAACTG ACTACTGCAAGCAGCCTGTAAATGTGAAGGTTAAGATTCTTCAGTACCTTTGTGATGAAATGATTGAAGTGGAAGCCTTAAGGTCAGAGCTTAACAGAAG ATCTTTGGCAACTGAGACTGATGTGGTCTTCAATCAGAATATGTATTTTGACACTTGTAAGAAAAGAAGAGGTGTAGTGGATATGTCTCGTGGCTCTTGC TCGACTGAGGAGATTGTGGATGACACAACTGACTGGAACAGTGACGAGTGCTGCCTCTGTAAGATGGATGGGAGTTTAATATGCTGTGATGGCTGCCCTG CTGCGTTTCACTCAAGGTGTGTGGGAATTGCAAGTGACAGTCTGCCCGAAGGTGACTGGTATTGCCCTGAATGTGCAATTGGGCCACACGGGGCTTGGAT GAAATCGCGAAGGTCACTTCGAGGAGCAGACTTGTTAGGGATTGATCTCCATGCCCGTCTTTATTTTAACAGCTTTGGTTACCTATTAGTGTCAGACTCA TCTGACTCAGGCTCCTTGTTCAATTACTACCACAAAAATGATATACATGTAGTAATTGAAGTTCTAAAGTCTATGGGCACTTTGTATGGAAGCATATTAA TGGCTATTTATGAGCATTGGGATATCCCTGCCAACTTAAGTGCGAGGACTAGTAACTTGGTAGTCTTTAATCAAAGTTCCTGCAAAAATGTGCAAATAAG CGGAAATTTGAACAATAATCGGTCTGATGATGAAAGAAAGTTTGATGAAAATCAAACTGTTGACTGTTCTACTCATCCTGGCCAAGAATTTCCAAAAGCT GGGACCCACTTAGATTCAATGAAAACTAAAGAATGTCCTTTTGTTCCTTTAGAAGGGTTAGCTGATACCACACAAATGAGATCAGGGATTGAGAATGTTC GAATCTCTGGGCTTTATGACTCCAATAGATCTGATGTATCCTTGAATCAGTCGGGAATACTAGAAAAACATCATCCAGTTGGTGATTGTTCGTTGACATC TGCCAGCTTAGATGTGGGACATAACATAAACTTTAGATCTGTGGGTGCTAGCTGTACCCCCTCCACTGCCAATAAGGATACCTCAGTAGTGCCTTGTGAA GTTGACTTCATAAACTACTATAGCTTTGCCCGAACAGCCGCATTAGTTGCAGAAGAGTTGATATGCAAGTCACCTGAGAAGATCAATGTAATGTCTGAAG AGGACATAATTTCAGATCAAGCAAAGGCCATCATGAAGAAATCTTCAAACTTTTGTTGGCCAAGTATTGAAAACCTGAATGCAGCTGCTGAAAAGGAAAA ATGTGGGTGGTGCTTTTCTTGCAAAGTTGCTAATGATGACCGGGGTTGCTTGTTTAATGATGTGATGAAGTCTGTTTTGGACGTGCCTAATAATACTTTA GTCGGACTTGAATCCAGGAAGATCCATAATTTACATCTTAGAGCTATCATATGTCATATTGTTTCCCTTGAGGACCGATTACGTGGGCTTTTGTTGGGTC CATGGTTGGATCCACATCAAACCAATCTTTGGCATCAGGAACTTCTGAAGACATCCGATTTTTTTCCTGTTAAACAATTGTTGCTCCTAGTAAGAATATG CTTTCTCTCTGTCAATTCTTTTATTAATGGCATTAGTACTATGACTGTCTCATGTCCTGTTACAAGTCATGAAGAAACTTGTTTGACATAATTGGTCACC TCATATTTCCTATTCACACTATTTCAATTATTGACTTAAAGTTGTACATGCGTGTGTGGTTGAACATCATGTGTTGTCTGATTCATGTAGCCTACCACAC CTAGTGGCAAAAGGCTTG
• Tissue: pods
• Gene name: LI_gene_187685;
• Additional information: details;

Expression of Ll_transcript_297262

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.1
• PS2: 0
• PS3: 0.2
• PW1: 0.1
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_297262

• Blastp: DDT domain-containing protein PTM from Arabidopsis with 36.31% of identity
• Blastx: DDT domain-containing protein PTM from Arabidopsis with 34.84% of identity
• Eggnog: Membrane-associated zinc metalloprotease(COG0750)
• Kegg: Link to kegg annotations (AT5G35210)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450898.1)
• Pfam: DDT domain (PF02791.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;