Id Trinity | TRINITY_DN51800_c0_g2_i2 |
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Name Transcript | Ll_transcript_448112 |
Sequence | GATAAGGCACACGCGTGAAACCCCACTGACTCGGTCACATTCCACATAAAAGTAACAAACACACCTCACAACATAACACTCTCTCACACTTACCTTTCTT TTAAGATAAATACACTTTCATTTCACACACTTCTAACAATAACACATTTTTCAACCTTCACTTCTCTTCTCTCCTTTTGTTTTTTAGGGTTCTGGAAACT AAAACCTTTCTCTCTCTTCACCATCCTCCAGTTTAAGGATATGGATTCGTTTGAGCCAGATGGAAATGGCAATGGCAACGGCAACAACAACGGCAACGGC AATGAGGAGTCTTTGCCACCACCCCCTCCCATTGTTCCACCAGATGTTGTACCTGTCAAAGCAGAAGATGTCCTTACTGTTCCTGCTGAACCAGTTAAGA AAAAGGCTTCCCGATTTCCGATAGCCAGACGCGGTCTTGGATCAAAAGGGATGAAGATATCTCTTCAAACCAATCATTTCAAAGTTAATGTCAATACCAA TGATGGATATTTCTTCCACTACAGCGTGGCTTTTTCTTACGAAGATGGACGCCCTGTTGAAGGTAAGGGCGTAGGGCGAAAGATAATGGATAGGGTGCAG GAGACATATGATTCAGAGTTAAATGGTAAGGACTTTGCATATGATGGGGAGAAAAGCCTGTTTACCATTGGATCTCTACCGCGAAACAAACTTGAGTTTG AAGTTGTTCTGGAGAATGTCACATCCAACAGGAATAATAATGGCAACTGTAGCCCTGACGACGGTCATGGGGACAATGACAGTGACAAAAAGAGAATTCG GCGCCCATATCGTGCAAAGACATTCAAGGTAGAGATTAGCTATGCTGCGAAAATCCCAATGCAGGCCATTGCCAATGCCTTACGAGGGCAGGAGTCAGAG AACTTTCAAGAAGCGATTAGAGTGCTTGATATTGTATTGAGGCAACATGCGGCAAAGCAAGGTTGCTTACTTGTCCGTCAATCATTCTTCCACAATGATC CGAATAATTTTGCTGATGTCGGAGGTGGTGTTCTTGGCTGCCGGGGATTCCATTCAAGCTTTAGAACTACACAGAGTGGCCTGTCT BLAST |
Tissue | pods |
Gene name | LI_gene_187691; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_448112
Blastp | Protein argonaute 4 from Arabidopsis with 68.7% of identity |
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Blastx | Protein argonaute 4 from Arabidopsis with 68.7% of identity |
Eggnog | eukaryotic translation initiation factor 2c(ENOG410XP07) |
Kegg | Link to kegg annotations (AT2G27040) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440717.1) |
Pfam | N-terminal domain of argonaute (PF16486.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |