Id Trinity | TRINITY_DN51801_c2_g1_i14 |
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Name Transcript | Ll_transcript_446504 |
Sequence | CCAAGATATTCTTTTCCCAAATTTACAGGGCTCTCACAAACGTGACAAAATGAATTGCTGACGTGGAATATTACCATTGGCCCAATTCGAATCGCGTTGA AACTCTCATCTCCAATTTTCTCTTAATTCCTTCCCCCACTTGCCAGGGTTCCCCTAACTTACTTCTCCAACTTTCTCTCCTCGCCGGCCGGTGAATTTCA CCGGGAATCCCATTCTCCGATCATATTCCAACTTCCCTCTTCCCTGTGCTCTTTCCCCATCCAACCCCAATTCCAATCCACTCGTTTCTCTCTTTCAAAT TTGTTTGCAGAGATTGTGTTGTGTGTAAAGAAAGATATGGCAAGTCAAAGGGATTCTTCTAGAAGGAGTTTTTCATCTGCTAAGAGAACTTCTGAGTCTG GAGTGCCTCACTCTACCGCTCGAAAATCTTTCTCATCTTTACGCTCTCCTCTGTAGGATGGTTTTTCGATAATCACACTATTTCTTTATTGTTCCAAATC AGTATTCTTATCATCTGATTTTGTAATATATATGGTTGAATAATCTAAGTTTTAGAGGGTAGTTGGTTTAGAGATTTTTAAAAGGGTGGTTAGTGCACGA GTTCCGGTAGATGTAACAGTCTTACCTTCGCCGACGAATGTTTCCCGGACCTCCTGGTCATAAGGCAAGACAATCTCATGTTGTGGAGAGGCTCACCCTC TTTGGTTCAGATTATTGTTGCAAAAAATGGCACTGCTCCAAAACGAGGTGGAAGGTGTTCGGCAACTACTACTGAATTTTTTAAGCTAGAATTTTGGACA TTGAAATTATCGGATAATGGTATTATTTTGGAAGCTAAATAAATGGAACACAGGCTTAGGGATTGTATGCGAGTTCAGTTTTGGAGGGGAAGAAAGAGAA ATAGGAAGCTTTGGAACATCTTAAAAGTGTATTTCATGGCTCTTAATTATCTTTCACATCATTCCCTTCCAAAACTCAATTCACAAACAAACTTTAAAGG AAAATGAGCCATGAAATACACTGGTAAGATGACTCTAAATACTGTCCTTGTCTTCCTTCCCGTTCAAACTTAACTCGCGAGCAGACCCTTTTGCACCAAT CATATTAGTTCCCCAAACCATAGACGGTGAACATTTGCCCAAAGTTCTTGCCTTGTGACATGGAAGTTACCGGTTGAAATCCAGAAACCTCTCCTACTTG GATTGTGGTGTTTAGGCTGCACATTTATCTTTCCTAGACTCCATCGAGTGGGAACCTTATGAATTGTGGGTCTATTTTTTAGCTCCTGAAACTGTGTTAT GGTCTATAAAGTGGTCCTCACATGAGTATTAATTTGAGTGTGCTTATAACATACTATGTAAGAGTTAATACGATTAATTTCGTAATCTCAGATATGACTT TGACTAATTTAACCTGTCCTTACAATTCCAAGGACCAAATTGAAAGTAACACCTTCAAATTTTTATACTTTTTTTATCCTTTTTAATTAGATGGTATATT TTGTCAGGATTAAAACTCTTTCATCTGCCATACATCTTTTTCATTTCATATGCTCTGTTTTCAGTCTTAAAAGTTGTCTTGGAAAGGAAAGATAAAAGAA AAAGTTAAGGTTATACTGTACTAAAAGACTCATAATCATGTGAATATGAAATATTTTTATAGTAGCTATTTTTGCTGTCTTACAATGATTTTCCCTTTTA GAAGCAGATAGATTCTGGTTGTTTGATGCCGTAATTGCAAAAGTCAGTAAGTGTCAATGTCAAATAAATATGGGGTGTCAAAGTCTTGCCTAATTATTTG TTTACAATGATTTTAATAAAAAAACTATGACTTTGATGGTGTACTTTACCTGTTTGGGTTCAGTTTTTAGGCTTGTACCTATCAATTTCCAAAAACACAC AAAGCAGAAATGTATTGAAATACTTCTGCTACTACAAAATAGTTTCTAGGCTTCTACCTATCAATTTCACTTATATGAACACTTTAGTGGAATATTTCAT TGTTTCACCTCTCTTTTGTTTCTACTTAGTAAATGTATTTTTTATGCTATGAAATTCAGCCATCTACATCGAGCAATTCTTGTATGACATAGTTCATATT TACTTTATAATTGTATTATGCACAAAACAAATGTGGACTGGTGAGTCCACAAAGTGTATATGGCATAAGCCTATGCATGAATTTCTCCATCTTCCTCCTT AAAGTTTTGATTGAGTTGTCAGTTTCAGAGTTATATGGTCATGCCATTGCTATCTGTATAGGGAGCTGCACATTATTAAATCACACATTTCATAACAGAT TGAGGGTCAGCCTTGGTGCAATGGTAAGGTTGCTTGTCTTTTGACCCGGAGGTCATGGGTTTAAATACTGGAAAAACCTCTTCGCTTGTGAGGCTAAGGT TGTGTATATCTATCCTCCCTAAATCCATTTAGGTAGGAGCCTCGTGCATTGGGCCGACTTATACTTCATAATAGATTAGTTGTTGTCTAAAAAGTTTTAC TAGAGAAGCTTGATGCGTTTAATGAGTTGTTATTAAATGCATTTAGTTAGATGATGCCTTGTTTCTATTTGGAAATTGGAATTCGATCAGGGGAATGACG GGAGAGCGAACAGTGAAATCATTGCGACTTTTAAAGGCCTTGACAGTACCTGACACAGCGACTATTTATGAAGCTTGCCGTCGGATGGCTGCCCGTAGAG TAGATGCTCTATTACTAACTGATTTAAATGGCATGCTCTGTGGTATCCTCACAGACAAGGACATAGTAACAAGAGTTATTGCTCGAGATATTAATCTTGA AGAGACATCTGTTTCCAAGGTTATGACTAAGAATCCAACATTTGTCCTTTCTGAAAGTCTTGCTGTTGAAGCTCTGCAAAAGATGGTTCAAGGGAAATTT AGACATTTACCTGTGGTGGAGAATGGAGAAGTTGTTGCCTTACTCGACATAGCAAAGTGTTTATATGATGCCATAGCCCGTATGGAAAGGGCAGCTGAGA AAGGAAATGCAATTGCAGCAGCTGTTGAAGGTGTTGAAAAACAATGGGGATCATCTGCTTCAGTCTCCAATTTATCATTCATTGAGACTCTCCGGGAGCA GATATTCAAGCCAGCTTTGTCTACAATCATTCCCGATAATTCAAAGGTAGTAACAGTTTCACCAGAAGACTCAGTTTTGACAACAACAAAGAAGATGCTT GAACTTCATGCAAGTTCCGCTATTGTGACAGTTGACAACAAACCTCGTGGCATCCTTACTTCAAAGGATATCTTGATGCGGGTAATCGCGCAGAGGCTTC CCCTGGAATCAACTCCTGTTGAGAAGGTCATGACTCCAAATCCCGAATGTGCAGTCATTGATACATCTATTGTTGATGCACTTCACACTATGCATGATGG GAAATTTTTGCATCTTCCTGTGGTTGATAGAGTTGTAACAACTACCACAATTGAAATGGTTCGGCTGCATCACGTGATGCAGTCTGCAATTTAAAACTAT GATCATATATGGAATGGGGAAGAGGTTTGTCAATCTTTTTTTCCTTCTGATTTCGGTGGTTATTTAAACAGATGGTAGTGTAGTTGCTGTGGTGGATGTG ATTCATGTCACTCATGCTGCGGTAACGACAGTAATTCAGGTGTGTTATCATAGACCGTAATACTCAATGCTGCTGATTACATGGACCCTCTGTTAAAGTT TTGTTGCGTCAAAGTGGGATAAATGGCAATATTTATGTAAACTCATAGCTTTTAGCTTGAATTGTGTTAGAAAAACCTTTTAGTTTCCCAAGTCTTGAAA TTAGTTTTTTGGTTTTTAACATATTGTTGACTACTACGTCCATGAACTGATAAGTATTGATATCTTTACTTGTATGGCTATTAATGATAAGCAGTTCTAT CTACAGTGTGCATTTTAGTCCTAAACCTGGCAAAATTTTATTTCCTTTTGTTTTCCATCACCCATTTATTTTAGCTACATTGAGTCATATCTTACATCTA CAGAGTTATAAGATTCTACTATTCCTTGTTCTTTCCTGACCTAAATAATCAAACCCTGGCCTTATTAACGCATGAGGGTTGTTTTTCAGTAAGCTGGTGG TGATAATCTCATAAATCTGTGATTGAGGCTGAAATGTCCAATATTATGTTTTCTATATTTTATGCAATAACTTTTTAGTGTTTACACATGTCTTGTAAGC ATGCTTTTGACTACATGTTTTGACCAAATATCAGTCTTATTTAAATGGTCCCTTCCTTTTGAAAGTCAAATGTCATGTTTTCACTAACGTTAGCGAATAC GTAAAAATAAATAAATAAACAGTTGTTCAGCTGTCACCTCAATGTCTTAAGAAAAAGTTTTCCCTTCAGGAAACTTTGGTTCAGCATTTTAGTGGTAGCC TGAGTACCCTCCAAAGGTAAAGAATGTAGGTTGGATTCTCCACTATCCTGCAAGAAATGTGCAGATCCTTCTAACCTACATTGCATGGTTAAGAAAGTCA TTGGATGTGAATATGAAAATATAACATTTAAAGATGATATATAATTATATATAGGATACAACATGGTAGATGGGATTCACGGGATATAAAAATCGCAAAT AACAATAGGCTTTCCTGTTTCTTTTACTTTGAGATTAACATATTCCCATGGAGATCAATCTCTCTGATCATAAGGTGCACAGTAGTGGAGGAAGAGGATG GCATACCTTGATGTTTGACAATGGTGCAGTCATATTGACCATGCTACAGGGTGCAACGGAGGAGCCAAACAATGCGGGGGATCCAGGCAGAAATGCTAAC AGCCCAAGTTGGAAAGCAGAAAACAGACATCGATTGGGAGTACTTCAGACCAATAGATTTAAATGATGTTCTAGAAATAATGGAAACCTTATGCCAAACC CAAGTAGTATAGGAATAAAAGCATACTTCTAGTAGGAATATGCAAGCATCCTTCAGTTAATTGTGAATTTGCAGACACTACGATACCAGTATTCTCTTTT TTCATGAAAGATCTAAGATTTTTTTACCAAACATTTTTAACAATGGTGTCAATTTCTTGCACTAATTAGGTTGGCAACAATGAAGCTGCCACCTCCATGA TGCAGAGATTTTGGGATTCAGCCATGGTCTCAACTCTTAATGATGATGAGGATGAAACACGAAGTGAGAATTCCTTGAAAATGGCTTCTGAGGGAGGAGA AACAGGGAGATTCCTTCCTTATATTTCTTCAAGCATGTCAAATACATTTTCCTTCAAAGTGCAAGATAGGAAGGGCAGATTGCATAGATTCACATGCGAT ACTGGGAGCATGACAGAGGTTATAACTTCAATCCTTCAGAGGCTTGGTGATGATATTGACCCCAACAAGCTGCCCCAAATTATGTATGAAGACGAAG BLAST |
Tissue | pods |
Gene name | LI_gene_187700; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446504
Blastp | CBS domain-containing protein CBSCBSPB1 from Arabidopsis with 74.73% of identity |
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Blastx | CBS domain-containing protein CBSCBSPB1 from Arabidopsis with 74.38% of identity |
Eggnog | Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity)(COG0517) |
Kegg | Link to kegg annotations (AT5G63490) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419084.1) |
Pfam | CBS domain (PF00571.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |