Ll_transcript_446485

Id TrinityTRINITY_DN51801_c2_g1_i4
Name TranscriptLl_transcript_446485
SequenceCCAAGATATTCTTTTCCCAAATTTACAGGGCTCTCACAAACGTGACAAAATGAATTGCTGACGTGGAATATTACCATTGGCCCAATTCGAATCGCGTTGA AACTCTCATCTCCAATTTTCTCTTAATTCCTTCCCCCACTTGCCAGGGTTCCCCTAACTTACTTCTCCAACTTTCTCTCCTCGCCGGCCGGTGAATTTCA CCGGGAATCCCATTCTCCGATCATATTCCAACTTCCCTCTTCCCTGTGCTCTTTCCCCATCCAACCCCAATTCCAATCCACTCGTTTCTCTCTTTCAAAT TTGTTTGCAGAGATTGTGTTGTGTGTAAAGAAAGATATGGCAAGTCAAAGGGATTCTTCTAGAAGGAGTTTTTCATCTGCTAAGAGAACTTCTGAGTCTG GAGTGCCTCACTCTACCGCTCGAAAATCTTTCTCATCTTTACGCTCTCCTCTGTAGGATGGTTTTTCGATAATCACACTATTTCTTTATTGTTCCAAATC AGTATTCTTATCATCTGATTTTGTAATATATATGGTTGAATAATCTAAGTTTTAGAGGGTAGTTGGTTTAGAGATTTTTAAAAGGGTGGTTAGTGCACGA GTTCCGGTAGATGTAACAGTCTTACCTTCGCCGACGAATGTTTCCCGGACCTCCTGGTCATAAGGCAAGACAATCTCATGTTGTGGAGAGGCTCACCCTC TTTGGTTCAGATTATTGTTGCAAAAAATGGCACTGCTCCAAAACGAGGTGGAAGGTGTTCGGCAACTACTACTGAATTTTTTAAGCTAGAATTTTGGACA TTGAAATTATCGGATAATGGTATTATTTTGGAAGCTAAATAAATGGAACACAGGCTTAGGGATTGTATGCGAGTTCAGTTTTGGAGGGGAAGAAAGAGAA ATAGGAAGCTTTGGAACATCTTAAAAGTGTATTTCATGGCTCTTAATTATCTTTCACATCATTCCCTTCCAAAACTCAATTCACAAACAAACTTTAAAGG AAAATGAGCCATGAAATACACTGGTAAGATGACTCTAAATACTGTCCTTGTCTTCCTTCCCGTTCAAACTTAACTCGCGAGCAGACCCTTTTGCACCAAT CATATTAGTTCCCCAAACCATAGACGGTGAACATTTGCCCAAAGTTCTTGCCTTGTGACATGGAAGTTACCGGTTGAAATCCAGAAACCTCTCCTACTTG GATTGTGGTGTTTAGGCTGCACATTTATCTTTCCTAGACTCCATCGAGTGGGAACCTTATGAATTGTGGGTCTATTTTTTAGCTCCTGAAACTGTGTTAT GGTCTATAAAGTGGTCCTCACATGAGTATTAATTTGAGTGTGCTTATAACATACTATGTAAGAGTTAATACGATTAATTTCGTAATCTCAGATATGACTT TGACTAATTTAACCTGTCCTTACAATTCCAAGGACCAAATTGAAAGTAACACCTTCAAATTTTTATACTTTTTTTATCCTTTTTAATTAGATGGTATATT TTGTCAGGATTAAAACTCTTTCATCTGCCATACATCTTTTTCATTTCATATGCTCTGTTTTCAGTCTTAAAAGTTGTCTTGGAAAGGAAAGATAAAAGAA AAAGTTAAGGTTATACTGTACTAAAAGACTCATAATCATGTGAATATGAAATATTTTTATAGTAGCTATTTTTGCTGTCTTACAATGATTTTCCCTTTTA GAAGCAGATAGATTCTGGTTGTTTGATGCCGTAATTGCAAAAGTCAGTAAGTGTCAATGTCAAATAAATATGGGGTGTCAAAGTCTTGCCTAATTATTTG TTTACAATGATTTTAATAAAAAAACTATGACTTTGATGGTGTACTTTACCTGTTTGGGTTCAGTTTTTAGGCTTGTACCTATCAATTTCCAAAAACACAC AAAGCAGAAATGTATTGAAATACTTCTGCTACTACAAAATAGTTTCTAGGCTTCTACCTATCAATTTCACTTATATGAACACTTTAGTGGAATATTTCAT TGTTTCACCTCTCTTTTGTTTCTACTTAGTAAATGTATTTTTTATGCTATGAAATTCAGCCATCTACATCGAGCAATTCTTGTATGACATAGTTCATATT TACTTTATAATTGTATTATGCACAAAACAAATGTGGACTGGTGAGTCCACAAAGTGTATATGGCATAAGCCTATGCATGAATTTCTCCATCTTCCTCCTT AAAGTTTTGATTGAGTTGTCAGTTTCAGAGTTATATGGTCATGCCATTGCTATCTGTATAGGGAGCTGCACATTATTAAATCACACATTTCATAACAGAT TGAGGGTCAGCCTTGGTGCAATGGTAAGGTTGCTTGTCTTTTGACCCGGAGGTCATGGGTTTAAATACTGGAAAAACCTCTTCGCTTGTGAGGCTAAGGT TGTGTATATCTATCCTCCCTAAATCCATTTAGGTAGGAGCCTCGTGCATTGGGCCGACTTATACTTCATAATAGATTAGTTGTTGTCTAAAAAGTTTTAC TAGAGAAGCTTGATGCGTTTAATGAGTTGTTATTAAATGCATTTAGTTAGATGATGCCTTGTTTCTATTTGGAAATTGGAATTCGATCAGGGGAATGACG GGAGAGCGAACAGTGAAATCATTGCGACTTTTAAAGGCCTTGACAGTACCTGACACAGCGACTATTTATGAAGCTTGCCGTCGGATGGCTGCCCGTAGAG TAGATGCTCTATTACTAACTGATTTAAATGGCATGCTCTGTGGTATCCTCACAGACAAGGACATAGTAACAAGAGTTATTGCTCGAGATATTAATCTTGA AGAGACATCTGTTTCCAAGGTTATGACTAAGAATCCAACATTTGTCCTTTCTGAAAGTCTTGCTGTTGAAGCTCTGCAAAAGATGGTTCAAGGGAAATTT AGACATTTACCTGTGGTGGAGAATGGAGAAGTTGTTGCCTTACTCGACATAGCAAAGTGTTTATATGATGCCATAGCCCGTATGGAAAGGGCAGCTGAGA AAGGAAATGCAATTGCAGCAGCTGTTGAAGGTGTTGAAAAACAATGGGGATCATCTGCTTCAGTCTCCAATTTATCATTCATTGAGACTCTCCGGGAGCA GATATTCAAGCCAGCTTTGTCTACAATCATTCCCGATAATTCAAAGGTAGTAACAGTTTCACCAGAAGACTCAGTTTTGACAACAACAAAGAAGATGCTT GAACTTCATGCAAGTTCCGCTATTGTGACAGTTGACAACAAACCTCGTGGCATCCTTACTTCAAAGGATATCTTGATGCGGGTAATCGCGCAGAGGCTTC CCCTGGAATCAACTCCTGTTGAGAAGGTCATGACTCCAAATCCCGAATGTGCAGTCATTGATACATCTATTGTTGATGCACTTCACACTATGCATGATGG GAAATTTTTGCATCTTCCTGTGGTTGATAGAGATGGTAGTGTAGTTGCTGTGGTGGATGTGATTCATGTCACTCATGCTGCGGTAACGACAGTAATTCAG GTGTGTTATCATAGACCGTAATACTCAATGCTGCTGATTACATGGACCCTCTGTTAAAGTTTTGTTGCGTCAAAGTGGGATAAATGGCAATATTTATGTA AACTCATAGCTTTTAGCTTGAATTGTGTTAGAAAAACCTTTTAGTTTCCCAAGTCTTGAAATTAGTTTTTTGGTTTTTAACATATTGTTGACTACTACGT CCATGAACTGATAAGTATTGATATCTTTACTTGTATGGCTATTAATGATAAGCAGTTCTATCTACAGTGTGCATTTTAGTCCTAAACCTGGCAAAATTTT ATTTCCTTTTGTTTTCCATCACCCATTTATTTTAGCTACATTGAGTCATATCTTACATCTACAGAGTTATAAGATTCTACTATTCCTTGTTCTTTCCTGA CCTAAATAATCAAACCCTGGCCTTATTAACGCATGAGGGTTGTTTTTCAGTAAGCTGGTGGTGATAATCTCATAAATCTGTGATTGAGGCTGAAATGTCC AATATTATGTTTTCTATATTTTATGCAATAACTTTTTAGTGTTTACACATGTCTTGTAAGCATGCTTTTGACTACATGTTTTGACCAAATATCAGTCTTA TTTAAATGGTCCCTTCCTTTTGAAAGTCAAATGTCATGTTTTCACTAACGTTAGCGAATACGTAAAAATAAATAAATAAACAGTTGTTCAGCTGTCACCT CAATGTCTTAAGAAAAAGTTTTCCCTTCAGGAAACTTTGGTTCAGCATTTTAGTGGTAGCCTGAGTACCCTCCAAAGGTAAAGAATGTAGGTTGGATTCT CCACTATCCTGCAAGAAATGTGCAGATCCTTCTAACCTACATTGCATGGTTAAGAAAGTCATTGGATGTGAATATGAAAATATAACATTTAAAGATGATA TATAATTATATATAGGATACAACATGGTAGATGGGATTCACGGGATATAAAAATCGCAAATAACAATAGGCTTTCCTGTTTCTTTTACTTTGAGATTAAC ATATTCCCATGGAGATCAATCTCTCTGATCATAAGGTGCACAGTAGTGGAGGAAGAGGATGGCATACCTTGATGTTTGACAATGGTGCAGTCATATTGAC CATGCTACAGGGTGCAACGGAGGAGCCAAACAATGCGGGGGATCCAGGCAGAAATGCTAACAGCCCAAGTTGGAAAGCAGAAAACAGACATCGATTGGGA GTACTTCAGACCAATAGATTTAAATGATGTTCTAGAAATAATGGAAACCTTATGCCAAACCCAAGTAGTATAGGAATAAAAGCATACTTCTAGTAGGAAT ATGCAAGCATCCTTCAGTTAATTGTGAATTTGCAGACACTACGATACCAGTATTCTCTTTTTTCATGAAAGATCTAAGATTTTTTTACCAAACATTTTTA ACAATGGTGTCAATTTCTTGCACTAATTAGGTTGGCAACAATGAAGCTGCCACCTCCATGATGCAGAGATTTTGGGATTCAGCCATGGTCTCAACTCTTA ATGATGATGAGGATGAAACACGAAGTGAGAATTCCTTGAAAATGGCTTCTGAGGGAGGAGAAACAGGGAGATTCCTTCCTTATATTTCTTCAAGCATGTC AAATACATTTTCCTTCAAAGTGCAAGATAGGAAGGGCAGATTGCATAGATTCACATGCGATACTGGGAGCATGACAGAGGTTATAACTTCAATCCTTCAG AGGCTTGGTGATGATATTGACCCCAACAAGCTGCCCCAAATTATGTATGAAGACGAAG BLAST
Tissuepods
Gene nameLI_gene_187700; 
Additional informationdetails; 

Expression of Ll_transcript_446485

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_446485
BlastpCBS domain-containing protein CBSCBSPB5 from Arabidopsis with 74.5% of identity
BlastxCBS domain-containing protein CBSCBSPB1 from Arabidopsis with 74.73% of identity
EggnogCatalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity)(COG0517)
KeggLink to kegg annotations (AT5G50530)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419084.1)
PfamCBS domain (PF00571.27)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;